RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Ephb1Q8CBF3 984 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 NemfQ8CCP0 1064 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Abcf3Q8K268 709 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Abhd8Q8R0P8 439 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Nudcd3Q8R1N4 363 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Pqbp1Q91VJ5 263 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Polr3hQ9D2C6 204 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Tubgcp4Q9D4F8 667 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Iigp1Q9QZ85 413 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Rgs17Q9QZB0 210 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Kif9Q9WV04 790 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gbp2Q9Z0E6 589 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Bub1bQ9Z1S0 1052 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gm1141B9EJU1 475 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Casq2O09161 415 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Xbp1O35426 267 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Tlk2O55047 718 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Ppargc1aO70343 797 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 JchainP01592 159 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gjb3P28231 270 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 MafbP54841 323 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Il1rapl1P59823 695 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Pik3r5Q5SW28 871 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Elac2Q80Y81 831 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Orai2Q8BH10 250 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Creb3l2Q8BH52 521 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Tmem220Q8BP07 167 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Lrrc4cQ8C031 640 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Brat1Q8C3R1 822 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Unc45bQ8CGY6 931 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 TwnkQ8CIW5 685 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Epn3Q91W69 636 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Pcdhb1Q91Y08 818 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Rasgef1cQ9D300 466 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Sgf29Q9DA08 293 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Igdcc4Q9EQS9 1252 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Cables1Q9ESJ1 568 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Slc13a1Q9JHI4 594 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Serpinb6cW4VSP4 379 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gm9774A0A0A6YVU8 407 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Dhx35A2ACQ1 703 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Zfp839E9PUU5 921 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 2610008E11RikG3X964 669 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 EsrraO08580 422 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Serpini1O35684 410 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Trdmt1O55055 415 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Soat2O88908 525 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 PrphP15331 475 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Lpar1P61793 364 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Abi2P62484 446 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Fam8a1Q3URQ4 399 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gm13103Q4VAD2 491 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Mief2Q5NCS9 454 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 RadilQ69Z89 1099 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gemin4Q6P6L6 1058 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Dennd2cQ6P9P8 914 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Tas2r109Q7M707 316 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Rps6ka6Q7TPS0 764 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Zdhhc15Q8BGJ0 337 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Best2Q8BGM5 508 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Nod1Q8BHB0 953 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Lyve1Q8BHC0 318 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 PreplQ8C167 725 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Cabs1Q8C633 391 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Kdm4bQ91VY5 1086 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Igf2bp3Q9CPN8 579 aaKnown RBP7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Taf7lQ9D3R9 471 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Nxnl2Q9D531 156 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Rassf7Q9DD19 359 aa7.2□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Zc3h4Q6ZPZ3 1304 aaKnown RBP7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gm15262A0A140LIQ5 728 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Nedd9O35177 833 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Hnrnph1O35737 449 aaKnown RBP7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gad2P48320 585 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Trim43bP86448 445 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Ccdc33Q3ULW6 985 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 1810049J17RikQ3V2G9 153 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Rad9bQ6WBX7 403 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Stambpl1Q76N33 436 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Baiap2l2Q80Y61 522 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Rbm12b1Q80YR9 836 aaKnown RBP7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Iars2Q8BIJ6 1012 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 SowahaQ8BLS7 548 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 PygbQ8CI94 843 aaKnown RBP7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Arfip2Q8K221 341 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Hip1Q8VD75 1029 aaKnown RBP7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Olfr30Q8VGD8 315 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Olfr532Q8VGT4 309 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Ugp2Q91ZJ5 508 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Msi2Q920Q6 346 aaKnown RBP7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Mettl16Q9CQG2 553 aaKnown RBP7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Cdc42ep5Q9Z0X0 150 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Olfr310B2RVZ1 332 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Pdzrn4E9PUZ9 1014 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Pex5O09012 639 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Trappc3O55013 180 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 ZfxP17012 799 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Hsd17b2P51658 381 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Gucy2eP52785 1108 aa7.19□□□□□ -1.26
Col6a6-201ENSMUST00000060896 Rpl22P67984 128 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms