RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Trim14Q8BVW3 440 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Slxl1Q9D515 155 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ddx20Q9JJY4 825 aaKnown RBP16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Trpv2Q9WTR1 756 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Kif28pD3YXS5 1028 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Vmn2r87E9PZX4 848 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Sema3eP70275 775 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ttc16Q8C1F5 767 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Stau2Q8CJ67 570 aaKnown RBP16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Dedd2Q8QZV0 330 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Brd8Q8R3B7 951 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Dcaf6Q9DC22 876 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cdc42ep4Q9JM96 349 aaKnown RBP16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 EpoP07321 192 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Sdr16c6Q05A13 316 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gm5431Q5NCB3 844 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fbxo42Q6PDJ6 717 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 RbakQ8BQC8 711 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Znf24Q91VN1 368 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Hfm1D3Z4R1 1434 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ccdc120A2AEV7 629 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rgs4O08899 205 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Srpk1O70551 648 aaKnown RBP16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Znf800Q0VEE6 662 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ppp4r3cQ3V0Y1 813 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Sel1l3Q80TS8 1137 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tex13c3Q810P0 219 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cox10Q8CFY5 443 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Klhl25Q8R2P1 589 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Nsmce2Q91VT1 247 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Vti1bO88384 232 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cd19P25918 547 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ifnar1P33896 590 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Vps33bP59016 617 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Crtc3Q91X84 619 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 TrabdQ99JY4 376 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 PmpcbQ9CXT8 489 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ttc30bQ9CY00 664 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tnfrsf21Q9EPU5 655 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Prox1P48437 737 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Lyrm1Q9CQB7 122 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 MtpapQ9D0D3 585 aaKnown RBP16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Sh2d3cQ9QZS8 854 aa16.2■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Unc13dB2RUP2 1085 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Sptlc1O35704 473 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Zcwpw1Q6IR42 630 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Trim62Q80V85 475 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Amz1Q8BVF9 502 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Phka2Q8BWJ3 1235 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Trim52Q8CDV4 233 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ptdss1Q99LH2 473 aaKnown RBP16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mrto4Q9D0I8 239 aaKnown RBP16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 H2bfmQ9DAB5 224 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Atf6F6VAN0 656 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Epb41l4aP52963 686 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Smcr8Q3UMB5 935 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Kcna6Q61923 529 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 DstykQ6XUX1 927 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Chsy1Q6ZQ11 800 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 LrmdaQ9D9B4 229 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rbp7Q9EPC5 134 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fmn2Q9JL04 1578 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ccng2O08918 344 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Maml1Q6T264 1020 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Emc3Q99KI3 261 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 RnmtQ9D0L8 465 aaKnown RBP16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cdyl2Q9D5D8 503 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pou5f2Q9DAC9 329 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ehd4Q9EQP2 541 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Erich1E9PY43 332 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gm8906L7N2A2 181 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 CcnoP0C242 352 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Guca1aP43081 202 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cd34Q64314 382 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Brsk2Q69Z98 735 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Casc4Q6P2L7 435 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Hmgxb4Q80Y32 594 aaKnown RBP16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Commd2Q8BXC6 199 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Nckap1lQ8K1X4 1134 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Chst15Q91XQ5 561 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 MmadhcQ99LS1 296 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Extl3Q9WVL6 918 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Lrriq1Q0P5X1 1673 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Slc9a6A1L3P4 702 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 YwhaqP68254 245 aaKnown RBP16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ahcyl1Q80SW1 530 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Agap1Q8BXK8 857 aaKnown RBP16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Efl1Q8C0D5 1127 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mrpl2Q9D773 306 aaKnown RBP16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 C87977A2A958 498 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Slc27a2O35488 620 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Catsper4Q8BVN3 442 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Frmd6Q8C0V9 622 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Kcnq3Q8K3F6 873 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ddx56Q9D0R4 546 aaKnown RBP16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Eef1akmt2Q9D853 244 aa16.19■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Zfp811A0A0J9YU71 552 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gm6460F6YJZ8 199 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 PigrO70570 771 aa16.18■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fcer2P20693 331 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms