RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Flt1P35969 1333 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr271-ps1A0A1L1SQH2 283 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Veph1A1A535 833 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Glt1d1A4FUP9 346 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Fgf15O35622 218 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Vav1P27870 845 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tas2r134Q7TQB0 298 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Plcl2Q8K394 1128 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Txndc12Q9CQU0 170 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mrpl2Q9D773 306 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 PtprmP28828 1452 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mpp3O88910 568 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 PrlP06879 226 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Stk32aQ8BGW6 398 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 RbakQ8BQC8 711 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mapre2Q8R001 326 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mgat5Q8R4G6 740 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ndufa5Q9CPP6 116 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gpatch1Q9DBM1 930 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pold3Q9EQ28 462 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Unc13dB2RUP2 1085 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 FechP22315 420 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Inf2Q0GNC1 1273 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Kctd8Q50H33 476 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Fam160b1Q8CDM8 764 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Amhr2Q8K592 568 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rbmx2Q8R0F5 326 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Agr3Q8R3W7 165 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Stk33Q924X7 491 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mmtag2Q99LX5 260 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ccdc81Q9D5W4 654 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CsadQ9DBE0 493 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 PrkcdP28867 674 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Oprl1P35377 367 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rbp1Q00915 135 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tigd5Q499M4 642 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cep44Q5HZK1 386 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rab36Q8CAM5 267 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Plekha4Q8VC98 588 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Utp6Q8VCY6 597 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sf3b3Q921M3 1217 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Josd2Q9CR30 188 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cep97Q9CZ62 856 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pik3cgQ9JHG7 1102 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 BcamQ9R069 622 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Prkab1Q9R078 270 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Slfn2Q9Z0I6 378 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Usp32F8VPZ3 1604 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Iqgap3F8VQ29 1632 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3383J3QQ59 259 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3164L7N2B9 238 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm3239L7N2D9 227 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Kifc3O35231 824 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rps6ka3P18654 740 aaKnown RBP10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Nr2c2P49117 596 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Fam107aQ78TU8 144 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gpr101Q80T62 511 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 4921511C20RikQ8BVT7 469 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Q8C6G1 249 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 RnpepQ8VCT3 650 aaKnown RBP10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Agap3Q8VHH5 910 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tex24Q5DP50 351 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mapre1Q61166 268 aaKnown RBP10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Kctd3Q8BFX3 815 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Arel1Q8CHG5 823 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Stau2Q8CJ67 570 aaKnown RBP10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Vps11Q91W86 941 aaKnown RBP10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Twf1Q91YR1 350 aaKnown RBP10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 GatbQ99JT1 557 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Htra2Q9JIY5 458 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Smok3cA0A087WSF2 504 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 EloblA6PWE0 161 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr726E9Q8X3 321 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Nedd1P33215 660 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Erbb2P70424 1256 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr725Q05A45 321 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 SvoplQ6PDF3 494 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Chst10Q6PGK7 356 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sun2Q8BJS4 731 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Clic5Q8BXK9 251 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 HpdlQ8K248 371 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pcdhb11Q91UZ8 797 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Smim11aQ99J19 55 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Dpp3Q99KK7 738 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ppp1r3gQ9CW07 347 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Actl7aQ9QY84 440 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CtcflA2APF3 636 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Frmd5Q6P5H6 517 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zfp341Q6PGC9 846 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Chsy1Q6ZQ11 800 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 3830417A13RikQ8BQJ2 303 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tyw3Q8BSA9 257 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Lin52Q8CD94 116 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Epm2aip1Q8VEH5 606 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cdhr5Q8VHF2 831 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Yipf1Q91VU1 306 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Angpt2O35608 496 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ppargc1aO70343 797 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cma1P21844 247 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rab21P35282 222 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms