RNA–Protein interactions for RNA: YPR182W

SMX3, Transcript of Core Sm protein Sm F, yeast

Gene SMX3, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMX3	YPR182W	FUN14	P18411	198 aa		4.92	□□□□□ -1.62
SMX3	YPR182W	PMP3	P87284	55 aa		4.92	□□□□□ -1.62
SMX3	YPR182W	FYV7	Q12247	151 aa		4.92	□□□□□ -1.62
SMX3	YPR182W	RPL16A	P26784	199 aa	Known RBP	4.91	□□□□□ -1.62
SMX3	YPR182W	MRP49	P32388	137 aa		4.91	□□□□□ -1.62
SMX3	YPR182W	APS1	P35181	156 aa		4.91	□□□□□ -1.62
SMX3	YPR182W	YJR146W	P47174	117 aa		4.91	□□□□□ -1.62
SMX3	YPR182W	YLR112W	Q12130	139 aa		4.91	□□□□□ -1.62
SMX3	YPR182W	TRP1	P00912	224 aa		4.9	□□□□□ -1.63
SMX3	YPR182W	HMRA2	P0CY13	119 aa		4.9	□□□□□ -1.63
SMX3	YPR182W	FYV4	P38783	130 aa	Predicted RBP	4.9	□□□□□ -1.63
SMX3	YPR182W	URM1	P40554	99 aa	Predicted RBP	4.9	□□□□□ -1.63
SMX3	YPR182W	HAC1	P41546	238 aa		4.9	□□□□□ -1.63
SMX3	YPR182W	HAL1	Q01766	294 aa		4.9	□□□□□ -1.63
SMX3	YPR182W	PKR1	Q03880	122 aa	Known RBP	4.9	□□□□□ -1.63
SMX3	YPR182W	YMR103C	Q04436	120 aa		4.9	□□□□□ -1.63
SMX3	YPR182W	COA3	Q3E7B2	85 aa		4.9	□□□□□ -1.63
SMX3	YPR182W	SEC11	P15367	167 aa		4.89	□□□□□ -1.63
SMX3	YPR182W	YPT53	P36019	220 aa		4.89	□□□□□ -1.63
SMX3	YPR182W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SMX3	YPR182W	CRC1	Q12289	327 aa		4.89	□□□□□ -1.63
SMX3	YPR182W	ADH2	P00331	348 aa	Known RBP	4.88	□□□□□ -1.63
SMX3	YPR182W	RPS8A	P0CX39	200 aa	Known RBP	4.88	□□□□□ -1.63
SMX3	YPR182W	RPS8B	P0CX40	200 aa	Known RBP	4.88	□□□□□ -1.63
SMX3	YPR182W	MRPL44	P19956	98 aa		4.88	□□□□□ -1.63
SMX3	YPR182W	YCR007C	P25354	239 aa		4.88	□□□□□ -1.63
SMX3	YPR182W	SCM4	P32564	187 aa		4.88	□□□□□ -1.63
SMX3	YPR182W	YKL070W	P36087	169 aa		4.88	□□□□□ -1.63
SMX3	YPR182W	YGL230C	P53074	147 aa		4.88	□□□□□ -1.63
SMX3	YPR182W	ERI1	P62651	68 aa	Known RBP	4.88	□□□□□ -1.63
SMX3	YPR182W	YMR122W-A	Q3E842	84 aa		4.88	□□□□□ -1.63
SMX3	YPR182W	ARC15	P40518	154 aa	RIP-Chip data	4.87	□□□□□ -1.63	not detected
SMX3	YPR182W	BET5	Q03630	159 aa		4.87	□□□□□ -1.63
SMX3	YPR182W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SMX3	YPR182W	YDL157C	Q12082	118 aa		4.87	□□□□□ -1.63
SMX3	YPR182W	YKL044W	P36092	106 aa		4.86	□□□□□ -1.63
SMX3	YPR182W	NAT5	Q08689	176 aa		4.86	□□□□□ -1.63
SMX3	YPR182W	SCS22	Q6Q595	175 aa		4.86	□□□□□ -1.63
SMX3	YPR182W	ATP5	P09457	212 aa		4.85	□□□□□ -1.63
SMX3	YPR182W	RPL31A	P0C2H8	113 aa	Known RBP	4.85	□□□□□ -1.63
SMX3	YPR182W	AIM29	P36154	155 aa		4.85	□□□□□ -1.63
SMX3	YPR182W	YBR209W	P38311	105 aa		4.85	□□□□□ -1.63
SMX3	YPR182W	YEL008W	P40001	126 aa		4.85	□□□□□ -1.63
SMX3	YPR182W	YIL059C	P40520	121 aa		4.85	□□□□□ -1.63
SMX3	YPR182W	MSL1	P40567	111 aa	Predicted RBP	4.85	□□□□□ -1.63
SMX3	YPR182W	SPC1	P46965	94 aa		4.85	□□□□□ -1.63
SMX3	YPR182W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.85	□□□□□ -1.63
SMX3	YPR182W	YGL088W	P53151	121 aa		4.84	□□□□□ -1.63
SMX3	YPR182W	YAR029W	P39549	74 aa		4.83	□□□□□ -1.64
SMX3	YPR182W	YCL021W-A	Q96VH3	125 aa		4.83	□□□□□ -1.64
SMX3	YPR182W	YPR010C-A	A5Z2X5	72 aa		4.82	□□□□□ -1.64
SMX3	YPR182W	ATP15	P21306	62 aa		4.82	□□□□□ -1.64
SMX3	YPR182W	YLR194C	Q05777	254 aa		4.82	□□□□□ -1.64
SMX3	YPR182W	YPL261C	Q08976	102 aa		4.82	□□□□□ -1.64
SMX3	YPR182W	DFM1	Q12743	341 aa	Known RBP	4.82	□□□□□ -1.64
SMX3	YPR182W	RPL33A	P05744	107 aa	Known RBP	4.81	□□□□□ -1.64
SMX3	YPR182W	ERG28	P40030	148 aa		4.81	□□□□□ -1.64
SMX3	YPR182W	RPR2	P40571	144 aa		4.81	□□□□□ -1.64
SMX3	YPR182W	RPL33B	P41056	107 aa	Known RBP	4.81	□□□□□ -1.64
SMX3	YPR182W	AIM11	P87275	137 aa		4.81	□□□□□ -1.64
SMX3	YPR182W	SAE3	P89114	91 aa		4.81	□□□□□ -1.64
SMX3	YPR182W	PAU23	Q07987	124 aa		4.81	□□□□□ -1.64
SMX3	YPR182W	PAU17	Q12370	124 aa		4.81	□□□□□ -1.64
SMX3	YPR182W	YDL022C-A	P0C5L6	82 aa		4.8	□□□□□ -1.64
SMX3	YPR182W	YKR041W	P36134	250 aa		4.8	□□□□□ -1.64
SMX3	YPR182W	RPL32	P38061	130 aa	Known RBP	4.8	□□□□□ -1.64
SMX3	YPR182W	YPL073C	P40323	161 aa		4.8	□□□□□ -1.64
SMX3	YPR182W	LSO2	Q3E772	92 aa	Known RBP	4.8	□□□□□ -1.64
SMX3	YPR182W	YLL066W-B	Q8TGJ7	56 aa		4.8	□□□□□ -1.64
SMX3	YPR182W	YER085C	P40058	173 aa		4.79	□□□□□ -1.64
SMX3	YPR182W	RTC6	O14464	93 aa		4.78	□□□□□ -1.64
SMX3	YPR182W	YBR219C	P38317	127 aa		4.78	□□□□□ -1.64
SMX3	YPR182W	PEX17	P40155	199 aa		4.78	□□□□□ -1.64
SMX3	YPR182W	ENV10	Q99382	181 aa		4.78	□□□□□ -1.64
SMX3	YPR182W	SHU1	P38751	150 aa		4.77	□□□□□ -1.65
SMX3	YPR182W	YMR295C	Q03559	197 aa		4.77	□□□□□ -1.65
SMX3	YPR182W	YMR320W	Q04897	101 aa		4.77	□□□□□ -1.65
SMX3	YPR182W	PBA1	Q05778	276 aa		4.77	□□□□□ -1.65
SMX3	YPR182W	YLR415C	O13578	112 aa		4.76	□□□□□ -1.65
SMX3	YPR182W	YEL067C	P39978	195 aa		4.76	□□□□□ -1.65
SMX3	YPR182W	YDR115W	Q04598	105 aa		4.76	□□□□□ -1.65
SMX3	YPR182W	IGO2	Q9P305	131 aa		4.76	□□□□□ -1.65
SMX3	YPR182W	QCR8	P08525	94 aa		4.75	□□□□□ -1.65
SMX3	YPR182W	RPL18A	P0CX49	186 aa	Known RBP	4.75	□□□□□ -1.65
SMX3	YPR182W	RPL18B	P0CX50	186 aa	Known RBP	4.75	□□□□□ -1.65
SMX3	YPR182W	RPF1	P38805	295 aa	Known RBP	4.75	□□□□□ -1.65
SMX3	YPR182W	GLC8	P41818	229 aa		4.75	□□□□□ -1.65
SMX3	YPR182W	YNR077C	P53758	84 aa		4.75	□□□□□ -1.65
SMX3	YPR182W	PPT2	Q12036	173 aa		4.75	□□□□□ -1.65
SMX3	YPR182W	YMR175W-A	Q3E766	64 aa		4.75	□□□□□ -1.65
SMX3	YPR182W	COX14	P39103	70 aa		4.74	□□□□□ -1.65
SMX3	YPR182W	RPC10	P40422	70 aa		4.74	□□□□□ -1.65
SMX3	YPR182W	CIN5	P40917	295 aa		4.74	□□□□□ -1.65
SMX3	YPR182W	MRPS12	P53732	153 aa		4.74	□□□□□ -1.65
SMX3	YPR182W	YML079W	Q03629	201 aa		4.73	□□□□□ -1.65
SMX3	YPR182W	YLR363W-A	Q3E747	85 aa		4.73	□□□□□ -1.65
SMX3	YPR182W	YAL065C	O13511	128 aa		4.72	□□□□□ -1.65
SMX3	YPR182W	HAP3	P13434	144 aa		4.72	□□□□□ -1.65
SMX3	YPR182W	TOA2	P32774	122 aa		4.72	□□□□□ -1.65
SMX3	YPR182W	SVP26	P38869	228 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms