RNA–Protein interactions for RNA: YPR137W

RRP9, Transcript of Protein involved in pre-rRNA processing, yeast

Gene RRP9, Length 1,722 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP9	YPR137W	UBC11	P52492	156 aa		4.24	□□□□□ -1.73
RRP9	YPR137W	DAD3	P69850	94 aa		4.24	□□□□□ -1.73
RRP9	YPR137W	RPL42A	P0CX27	106 aa	Known RBP	4.24	□□□□□ -1.73
RRP9	YPR137W	RPL42B	P0CX28	106 aa	Known RBP	4.24	□□□□□ -1.73
RRP9	YPR137W	NTF2	P33331	125 aa	Known RBP	4.24	□□□□□ -1.73
RRP9	YPR137W	THG1	P53215	237 aa	Known RBP	4.24	□□□□□ -1.73
RRP9	YPR137W	LCL1	Q02786	101 aa		4.24	□□□□□ -1.73
RRP9	YPR137W	MET32	Q12041	191 aa		4.24	□□□□□ -1.73
RRP9	YPR137W	YLR307C-A	Q3E825	87 aa		4.24	□□□□□ -1.73
RRP9	YPR137W	YJL197C-A	P0C5P0	93 aa		4.23	□□□□□ -1.73
RRP9	YPR137W	ZRT1	P32804	376 aa		4.23	□□□□□ -1.73
RRP9	YPR137W	VMA7	P39111	118 aa		4.23	□□□□□ -1.73
RRP9	YPR137W	SNN1	P48232	102 aa		4.23	□□□□□ -1.73
RRP9	YPR137W	APS2	Q00381	147 aa		4.23	□□□□□ -1.73
RRP9	YPR137W	YDR029W	Q12111	104 aa		4.23	□□□□□ -1.73
RRP9	YPR137W	FMP49	A0A023PZB3	126 aa		4.22	□□□□□ -1.73
RRP9	YPR137W	YBR298C-A	Q8TGK4	73 aa		4.22	□□□□□ -1.73
RRP9	YPR137W	PHS1	P40857	217 aa		4.21	□□□□□ -1.73
RRP9	YPR137W	DCV1	P43595	202 aa		4.21	□□□□□ -1.73
RRP9	YPR137W	ATP14	Q12349	124 aa		4.21	□□□□□ -1.73
RRP9	YPR137W	OST3	P48439	350 aa		4.21	□□□□□ -1.74
RRP9	YPR137W	FSF1	Q12029	327 aa	Known RBP	4.21	□□□□□ -1.74
RRP9	YPR137W	RPL32	P38061	130 aa	Known RBP	4.2	□□□□□ -1.74
RRP9	YPR137W	PAU7	P39545	55 aa		4.2	□□□□□ -1.74
RRP9	YPR137W	PAU5	P43575	122 aa		4.2	□□□□□ -1.74
RRP9	YPR137W	YNL184C	P53876	108 aa		4.19	□□□□□ -1.74
RRP9	YPR137W	YLR194C	Q05777	254 aa		4.19	□□□□□ -1.74
RRP9	YPR137W	MRPS9	P38120	278 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	YBL081W	P38180	368 aa	Known RBP	4.18	□□□□□ -1.74
RRP9	YPR137W	YAL064W	P39711	94 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	SNA2	P56508	79 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	VMA9	Q3E7B6	73 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	HMRA1	P0CY11	126 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	YBR209W	P38311	105 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	RPC10	P40422	70 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	BNS1	P50084	137 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	YGL088W	P53151	121 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	YER175W-A	Q8TGU4	54 aa		4.18	□□□□□ -1.74
RRP9	YPR137W	SMP1	P38128	452 aa		4.17	□□□□□ -1.74
RRP9	YPR137W	RPF1	P38805	295 aa	Known RBP	4.17	□□□□□ -1.74
RRP9	YPR137W	UBC12	P52491	188 aa		4.17	□□□□□ -1.74
RRP9	YPR137W	YPL257W	Q08974	193 aa		4.17	□□□□□ -1.74
RRP9	YPR137W	RPL31A	P0C2H8	113 aa	Known RBP	4.16	□□□□□ -1.74
RRP9	YPR137W	CNL1	Q06333	122 aa		4.16	□□□□□ -1.74
RRP9	YPR137W	LDS1	P31379	325 aa		4.15	□□□□□ -1.74
RRP9	YPR137W	YKR032W	P36127	104 aa		4.15	□□□□□ -1.74
RRP9	YPR137W	HAC1	P41546	238 aa		4.15	□□□□□ -1.74
RRP9	YPR137W	MED7	Q08278	222 aa		4.15	□□□□□ -1.74
RRP9	YPR137W	ENV10	Q99382	181 aa		4.15	□□□□□ -1.74
RRP9	YPR137W	PRE1	P22141	198 aa	Known RBP	4.15	□□□□□ -1.75
RRP9	YPR137W	YGL010W	P25338	174 aa		4.15	□□□□□ -1.75
RRP9	YPR137W	PAM17	P36147	197 aa		4.15	□□□□□ -1.75
RRP9	YPR137W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.15	□□□□□ -1.75
RRP9	YPR137W	IGO2	Q9P305	131 aa		4.15	□□□□□ -1.75
RRP9	YPR137W	PBI2	P0CT04	75 aa	Known RBP	4.14	□□□□□ -1.75
RRP9	YPR137W	DDR48	P18899	430 aa	Known RBP	4.14	□□□□□ -1.75
RRP9	YPR137W	YKR070W	P36151	352 aa	Known RBP	4.14	□□□□□ -1.75
RRP9	YPR137W	YNR034W-A	Q3E841	98 aa		4.14	□□□□□ -1.75
RRP9	YPR137W	YLR415C	O13578	112 aa		4.13	□□□□□ -1.75
RRP9	YPR137W	TOA2	P32774	122 aa		4.13	□□□□□ -1.75
RRP9	YPR137W	HSP10	P38910	106 aa		4.13	□□□□□ -1.75
RRP9	YPR137W	YIL024C	P40543	189 aa		4.13	□□□□□ -1.75
RRP9	YPR137W	GTT1	P40582	234 aa		4.13	□□□□□ -1.75
RRP9	YPR137W	SDS23	P53172	527 aa		4.13	□□□□□ -1.75
RRP9	YPR137W	PEX22	P39718	180 aa		4.12	□□□□□ -1.75
RRP9	YPR137W	YIA6	P40556	373 aa		4.12	□□□□□ -1.75
RRP9	YPR137W	RPL23A	P0CX41	137 aa	Known RBP	4.12	□□□□□ -1.75
RRP9	YPR137W	RPL23B	P0CX42	137 aa	Known RBP	4.12	□□□□□ -1.75
RRP9	YPR137W	PET8	P38921	284 aa		4.12	□□□□□ -1.75
RRP9	YPR137W	YJR146W	P47174	117 aa		4.12	□□□□□ -1.75
RRP9	YPR137W	COF1	Q03048	143 aa	Known RBP	4.12	□□□□□ -1.75
RRP9	YPR137W	YLR118C	Q12354	227 aa		4.12	□□□□□ -1.75
RRP9	YPR137W	TRP1	P00912	224 aa		4.11	□□□□□ -1.75
RRP9	YPR137W	SRB6	P32570	121 aa		4.11	□□□□□ -1.75
RRP9	YPR137W	YBR219C	P38317	127 aa		4.11	□□□□□ -1.75
RRP9	YPR137W	DAN1	P47178	298 aa		4.11	□□□□□ -1.75
RRP9	YPR137W	HHO1	P53551	258 aa		4.11	□□□□□ -1.75
RRP9	YPR137W	YDR010C	Q12426	110 aa		4.11	□□□□□ -1.75
RRP9	YPR137W	YCL021W-A	Q96VH3	125 aa		4.11	□□□□□ -1.75
RRP9	YPR137W	AIM19	P40502	157 aa		4.1	□□□□□ -1.75
RRP9	YPR137W	YMR175W-A	Q3E766	64 aa		4.1	□□□□□ -1.75
RRP9	YPR137W	YEL008W	P40001	126 aa		4.09	□□□□□ -1.75
RRP9	YPR137W	YBL112C	Q3E7Y4	105 aa		4.09	□□□□□ -1.75
RRP9	YPR137W	PFY1	P07274	126 aa		4.09	□□□□□ -1.76
RRP9	YPR137W	YER039C-A	P0CD97	72 aa		4.09	□□□□□ -1.76
RRP9	YPR137W	SPT4	P32914	102 aa	Predicted RBP	4.09	□□□□□ -1.76
RRP9	YPR137W	YAR029W	P39549	74 aa		4.09	□□□□□ -1.76
RRP9	YPR137W	OST2	P46964	130 aa		4.09	□□□□□ -1.76
RRP9	YPR137W	VTC1	P40046	129 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
RRP9	YPR137W	AIM11	P87275	137 aa		4.08	□□□□□ -1.76
RRP9	YPR137W	ADH3	P07246	375 aa	Known RBP	4.07	□□□□□ -1.76
RRP9	YPR137W	NSE4	P43124	402 aa		4.07	□□□□□ -1.76
RRP9	YPR137W	SHH4	Q06236	168 aa		4.07	□□□□□ -1.76
RRP9	YPR137W	YOR008C-A	Q3E7B9	74 aa		4.07	□□□□□ -1.76
RRP9	YPR137W	ECM12	O13529	151 aa		4.07	□□□□□ -1.76
RRP9	YPR137W	MGR2	Q02889	113 aa		4.07	□□□□□ -1.76
RRP9	YPR137W	SCM4	P32564	187 aa		4.06	□□□□□ -1.76
RRP9	YPR137W	YMR295C	Q03559	197 aa		4.06	□□□□□ -1.76
RRP9	YPR137W	YGL041C-B	Q3E750	60 aa		4.06	□□□□□ -1.76
RRP9	YPR137W	AQY1	P0CD91	305 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms