RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeastyeast

Gene HAL1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HAL1YPR005C KSH1Q8TGJ3 72 aa2.56□□□□□ -2
HAL1YPR005C BNI1P41832 1953 aa2.55□□□□□ -2
HAL1YPR005C HUG1Q6Q5K6 68 aa2.55□□□□□ -2
HAL1YPR005C YHR213W-BQ8TGK1 99 aa2.55□□□□□ -2
HAL1YPR005C SRB6P32570 121 aa2.54□□□□□ -2
HAL1YPR005C LSM6Q06406 86 aaKnown RBP2.54□□□□□ -2
HAL1YPR005C HHY1P39982 102 aa2.53□□□□□ -2
HAL1YPR005C PDR10P51533 1564 aa2.53□□□□□ -2.01
HAL1YPR005C RSM19P53733 91 aaPredicted RBP2.52□□□□□ -2.01
HAL1YPR005C MYO1P08964 1928 aa2.52□□□□□ -2.01
HAL1YPR005C YCL001W-BQ96VH2 84 aa2.5□□□□□ -2.01
HAL1YPR005C RSF2P46974 1380 aa2.49□□□□□ -2.01
HAL1YPR005C MRPS12P53732 153 aa2.49□□□□□ -2.01
HAL1YPR005C YOL118CQ08259 102 aa2.49□□□□□ -2.01
HAL1YPR005C NTE1Q04958 1679 aa2.49□□□□□ -2.01
HAL1YPR005C SEC7P11075 2009 aaKnown RBP2.47□□□□□ -2.01
HAL1YPR005C LAA1P39526 2014 aa2.47□□□□□ -2.01
HAL1YPR005C RPL37AP49166 88 aaKnown RBP2.47□□□□□ -2.01
HAL1YPR005C YMR141CP40211 102 aa2.46□□□□□ -2.02
HAL1YPR005C EMC5P40540 141 aa2.45□□□□□ -2.02
HAL1YPR005C IMP2P46972 177 aa2.45□□□□□ -2.02
HAL1YPR005C ESC1Q03661 1658 aaKnown RBP2.44□□□□□ -2.02
HAL1YPR005C CCW14O13547 238 aa2.44□□□□□ -2.02
HAL1YPR005C YHL005CP38752 130 aa2.44□□□□□ -2.02
HAL1YPR005C MSL1P40567 111 aaPredicted RBP2.44□□□□□ -2.02
HAL1YPR005C ROX3P25046 220 aa2.42□□□□□ -2.02
HAL1YPR005C YCR095W-AQ3E787 52 aa2.42□□□□□ -2.02
HAL1YPR005C PAU5P43575 122 aa2.41□□□□□ -2.02
HAL1YPR005C LCL1Q02786 101 aa2.41□□□□□ -2.02
HAL1YPR005C YCR075W-AQ3E830 75 aa2.4□□□□□ -2.03
HAL1YPR005C SWR1Q05471 1514 aa2.4□□□□□ -2.03
HAL1YPR005C SEC16P48415 2195 aaKnown RBP2.4□□□□□ -2.03
HAL1YPR005C HMRA1P0CY11 126 aa2.39□□□□□ -2.03
HAL1YPR005C YDR029WQ12111 104 aa2.39□□□□□ -2.03
HAL1YPR005C YJR128WP47162 119 aa2.38□□□□□ -2.03
HAL1YPR005C YDR210WQ03482 75 aa2.38□□□□□ -2.03
HAL1YPR005C RRT15Q3E811 62 aa2.38□□□□□ -2.03
HAL1YPR005C YRF1-1P0CX20 1796 aa2.37□□□□□ -2.03
HAL1YPR005C YRF1-5P0CX21 1796 aa2.37□□□□□ -2.03
HAL1YPR005C YRF1-8P0CX22 1796 aa2.37□□□□□ -2.03
HAL1YPR005C SNA2P56508 79 aa2.37□□□□□ -2.03
HAL1YPR005C YPL038W-AQ3E7B4 63 aa2.37□□□□□ -2.03
HAL1YPR005C SRB8P25648 1427 aa2.35□□□□□ -2.03
HAL1YPR005C GCV3P39726 170 aaPredicted RBP2.35□□□□□ -2.03
HAL1YPR005C YOR034C-AQ3E735 80 aa2.34□□□□□ -2.03
HAL1YPR005C BRR2P32639 2163 aaKnown RBP2.33□□□□□ -2.04
HAL1YPR005C COX12Q01519 83 aa2.33□□□□□ -2.04
HAL1YPR005C SUS1Q6WNK7 96 aa2.33□□□□□ -2.04
HAL1YPR005C SSN2P38931 1420 aa2.33□□□□□ -2.04
HAL1YPR005C RPL43AP0CX25 92 aaKnown RBP2.32□□□□□ -2.04
HAL1YPR005C RPL43BP0CX26 92 aa2.32□□□□□ -2.04
HAL1YPR005C TY4B-HP0C2J7 1802 aa2.31□□□□□ -2.04
HAL1YPR005C YIL086CP40503 102 aa2.31□□□□□ -2.04
HAL1YPR005C RSM18P40033 138 aa2.3□□□□□ -2.04
HAL1YPR005C MRX7P53869 86 aa2.3□□□□□ -2.04
HAL1YPR005C GDB1Q06625 1536 aa2.3□□□□□ -2.04
HAL1YPR005C LTE1P07866 1435 aa2.29□□□□□ -2.04
HAL1YPR005C YLR255CO13574 117 aa2.29□□□□□ -2.04
HAL1YPR005C YBL071CP38185 102 aa2.29□□□□□ -2.04
HAL1YPR005C MRP17P28778 131 aa2.28□□□□□ -2.04
HAL1YPR005C RPL37BP51402 88 aaKnown RBP2.28□□□□□ -2.04
HAL1YPR005C YDR042CQ03205 200 aa2.28□□□□□ -2.04
HAL1YPR005C YMR082CQ04276 118 aa2.28□□□□□ -2.04
HAL1YPR005C PAU6P0CE90 120 aa2.27□□□□□ -2.05
HAL1YPR005C PAU18P0CE91 120 aa2.27□□□□□ -2.05
HAL1YPR005C SNU13P39990 126 aaKnown RBP2.27□□□□□ -2.05
HAL1YPR005C YGL194C-AQ2V2P6 80 aa2.27□□□□□ -2.05
HAL1YPR005C URA2P07259 2214 aaKnown RBP2.27□□□□□ -2.05
HAL1YPR005C ECM12O13529 151 aa2.26□□□□□ -2.05
HAL1YPR005C SHU1P38751 150 aa2.26□□□□□ -2.05
HAL1YPR005C COX19Q3E731 98 aa2.26□□□□□ -2.05
HAL1YPR005C NHP10Q03435 203 aa2.24□□□□□ -2.05
HAL1YPR005C MRPL38P35996 138 aaPredicted RBP2.23□□□□□ -2.05
HAL1YPR005C AIM19P40502 157 aa2.23□□□□□ -2.05
HAL1YPR005C POL1P13382 1468 aa2.22□□□□□ -2.05
HAL1YPR005C SPC1P46965 94 aa2.22□□□□□ -2.05
HAL1YPR005C MHF2Q3E829 80 aa2.22□□□□□ -2.05
HAL1YPR005C YNR034W-AQ3E841 98 aa2.22□□□□□ -2.05
HAL1YPR005C POL2P21951 2222 aaKnown RBP2.21□□□□□ -2.06
HAL1YPR005C MPC2P38857 129 aa2.21□□□□□ -2.06
HAL1YPR005C ICY1Q04329 127 aa2.21□□□□□ -2.06
HAL1YPR005C SCP1Q08873 200 aa2.2□□□□□ -2.06
HAL1YPR005C YSP2Q06681 1438 aa2.19□□□□□ -2.06
HAL1YPR005C PAU20Q08322 120 aa2.19□□□□□ -2.06
HAL1YPR005C PAU1P0CE88 120 aa2.18□□□□□ -2.06
HAL1YPR005C PAU14P0CE89 120 aa2.18□□□□□ -2.06
HAL1YPR005C PAU8P0CE92 120 aa2.18□□□□□ -2.06
HAL1YPR005C PAU11P0CE93 120 aa2.18□□□□□ -2.06
HAL1YPR005C YBR292CP38357 123 aa2.18□□□□□ -2.06
HAL1YPR005C PAU13P38725 120 aa2.18□□□□□ -2.06
HAL1YPR005C PAU10Q03050 120 aa2.18□□□□□ -2.06
HAL1YPR005C PAU9Q3E770 120 aa2.18□□□□□ -2.06
HAL1YPR005C YER188C-AP0C0V2 99 aa2.16□□□□□ -2.06
HAL1YPR005C TY1B-BRQ12193 1756 aa2.15□□□□□ -2.06
HAL1YPR005C RPS11AP0CX47 156 aaKnown RBP2.15□□□□□ -2.07
HAL1YPR005C RPS11BP0CX48 156 aaKnown RBP2.15□□□□□ -2.07
HAL1YPR005C PAU4P53427 120 aa2.15□□□□□ -2.07
HAL1YPR005C YBR072C-AQ3E794 53 aa2.15□□□□□ -2.07
HAL1YPR005C YLR307C-AQ3E825 87 aa2.15□□□□□ -2.07
HAL1YPR005C YLR157W-EP0CF00 54 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms