RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W APS1P35181 156 aa10.46□□□□□ -0.73
SHR5YOL110W ARC15P40518 154 aaRIP-Chip data10.46□□□□□ -0.73not detected
SHR5YOL110W YIL059CP40520 121 aa10.46□□□□□ -0.73
SHR5YOL110W LSM8P47093 109 aaKnown RBP10.46□□□□□ -0.73
SHR5YOL110W AIM29P36154 155 aa10.45□□□□□ -0.74
SHR5YOL110W YLR050CQ12155 161 aaKnown RBP10.45□□□□□ -0.74
SHR5YOL110W TPT1Q12272 230 aaKnown RBP10.45□□□□□ -0.74
SHR5YOL110W YMR122W-AQ3E842 84 aa10.45□□□□□ -0.74
SHR5YOL110W TRP1P00912 224 aa10.44□□□□□ -0.74
SHR5YOL110W YGL088WP53151 121 aa10.44□□□□□ -0.74
SHR5YOL110W YMR103CQ04436 120 aa10.44□□□□□ -0.74
SHR5YOL110W YLR112WQ12130 139 aa10.44□□□□□ -0.74
SHR5YOL110W COA3Q3E7B2 85 aa10.44□□□□□ -0.74
SHR5YOL110W YGL015CP33199 130 aa10.43□□□□□ -0.74
SHR5YOL110W SPC1P46965 94 aa10.42□□□□□ -0.74
SHR5YOL110W FUN14P18411 198 aa10.41□□□□□ -0.74
SHR5YOL110W RPR2P40571 144 aa10.39□□□□□ -0.75
SHR5YOL110W HAC1P41546 238 aa10.39□□□□□ -0.75
SHR5YOL110W SCS22Q6Q595 175 aa10.39□□□□□ -0.75
SHR5YOL110W YCL021W-AQ96VH3 125 aa10.38□□□□□ -0.75
SHR5YOL110W RPL31AP0C2H8 113 aaKnown RBP10.37□□□□□ -0.75
SHR5YOL110W SEC11P15367 167 aa10.36□□□□□ -0.75
SHR5YOL110W YKL070WP36087 169 aa10.36□□□□□ -0.75
SHR5YOL110W YEL008WP40001 126 aa10.36□□□□□ -0.75
SHR5YOL110W NUP42P49686 430 aaKnown RBP10.35□□□□□ -0.75
SHR5YOL110W YGL230CP53074 147 aa10.35□□□□□ -0.75
SHR5YOL110W FYV7Q12247 151 aa10.35□□□□□ -0.75
SHR5YOL110W YER085CP40058 173 aa10.34□□□□□ -0.75
SHR5YOL110W MSL1P40567 111 aaPredicted RBP10.34□□□□□ -0.75
SHR5YOL110W YPR010C-AA5Z2X5 72 aa10.33□□□□□ -0.76
SHR5YOL110W ATP15P21306 62 aa10.32□□□□□ -0.76
SHR5YOL110W RPL33AP05744 107 aaKnown RBP10.31□□□□□ -0.76
SHR5YOL110W RPL33BP41056 107 aaKnown RBP10.31□□□□□ -0.76
SHR5YOL110W BET5Q03630 159 aa10.31□□□□□ -0.76
SHR5YOL110W NAT5Q08689 176 aa10.31□□□□□ -0.76
SHR5YOL110W YAR029WP39549 74 aa10.3□□□□□ -0.76
SHR5YOL110W PBA1Q05778 276 aa10.3□□□□□ -0.76
SHR5YOL110W YDL157CQ12082 118 aa10.3□□□□□ -0.76
SHR5YOL110W DFM1Q12743 341 aaKnown RBP10.3□□□□□ -0.76
SHR5YOL110W ERG28P40030 148 aa10.29□□□□□ -0.76
SHR5YOL110W AIM11P87275 137 aa10.29□□□□□ -0.76
SHR5YOL110W YPL261CQ08976 102 aa10.29□□□□□ -0.76
SHR5YOL110W MRPL44P19956 98 aa10.28□□□□□ -0.76
SHR5YOL110W SCM4P32564 187 aa10.28□□□□□ -0.76
SHR5YOL110W YKL044WP36092 106 aa10.28□□□□□ -0.76
SHR5YOL110W ATP5P09457 212 aa10.27□□□□□ -0.77
SHR5YOL110W YCR007CP25354 239 aa10.27□□□□□ -0.77
SHR5YOL110W RPL32P38061 130 aaKnown RBP10.27□□□□□ -0.77
SHR5YOL110W YMR320WQ04897 101 aa10.27□□□□□ -0.77
SHR5YOL110W YLL066W-BQ8TGJ7 56 aa10.27□□□□□ -0.77
SHR5YOL110W RTC6O14464 93 aa10.26□□□□□ -0.77
SHR5YOL110W SVP26P38869 228 aa10.25□□□□□ -0.77
SHR5YOL110W ENV10Q99382 181 aa10.25□□□□□ -0.77
SHR5YOL110W YLR194CQ05777 254 aa10.24□□□□□ -0.77
SHR5YOL110W DIF1O13577 133 aa10.23□□□□□ -0.77
SHR5YOL110W YBR219CP38317 127 aa10.22□□□□□ -0.77
SHR5YOL110W YPL073CP40323 161 aa10.22□□□□□ -0.77
SHR5YOL110W YMR295CQ03559 197 aa10.22□□□□□ -0.77
SHR5YOL110W RPL11AP0C0W9 174 aaKnown RBP10.21□□□□□ -0.77
SHR5YOL110W RPL11BQ3E757 174 aaPredicted RBP10.21□□□□□ -0.77
SHR5YOL110W YKR041WP36134 250 aa10.2□□□□□ -0.78
SHR5YOL110W SHU1P38751 150 aa10.2□□□□□ -0.78
SHR5YOL110W YDR115WQ04598 105 aa10.2□□□□□ -0.78
SHR5YOL110W YDL085C-AQ3E7B7 68 aaKnown RBP10.2□□□□□ -0.78
SHR5YOL110W YDL022C-AP0C5L6 82 aa10.19□□□□□ -0.78
SHR5YOL110W PEX17P40155 199 aa10.19□□□□□ -0.78
SHR5YOL110W SAE3P89114 91 aa10.19□□□□□ -0.78
SHR5YOL110W RPL18AP0CX49 186 aaKnown RBP10.18□□□□□ -0.78
SHR5YOL110W RPL18BP0CX50 186 aaKnown RBP10.18□□□□□ -0.78
SHR5YOL110W RRT15Q3E811 62 aa10.16□□□□□ -0.78
SHR5YOL110W RPC10P40422 70 aa10.15□□□□□ -0.78
SHR5YOL110W YMR175W-AQ3E766 64 aa10.15□□□□□ -0.78
SHR5YOL110W RPF1P38805 295 aaKnown RBP10.14□□□□□ -0.79
SHR5YOL110W PAU23Q07987 124 aa10.14□□□□□ -0.79
SHR5YOL110W PPT2Q12036 173 aa10.14□□□□□ -0.79
SHR5YOL110W PAU17Q12370 124 aa10.14□□□□□ -0.79
SHR5YOL110W IGO2Q9P305 131 aa10.13□□□□□ -0.79
SHR5YOL110W YAL064WP39711 94 aa10.11□□□□□ -0.79
SHR5YOL110W YEL067CP39978 195 aa10.11□□□□□ -0.79
SHR5YOL110W CIN5P40917 295 aa10.11□□□□□ -0.79
SHR5YOL110W VTS1Q08831 523 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79not detected
SHR5YOL110W QCR8P08525 94 aa10.1□□□□□ -0.79
SHR5YOL110W COX14P39103 70 aa10.1□□□□□ -0.79
SHR5YOL110W YAR023CD6VPM8 179 aa10.09□□□□□ -0.79
SHR5YOL110W RPL28P02406 149 aaKnown RBP10.09□□□□□ -0.79
SHR5YOL110W YPR195CQ06594 109 aa10.08□□□□□ -0.8
SHR5YOL110W ADH1P00330 348 aaKnown RBP10.07□□□□□ -0.8
SHR5YOL110W TOA2P32774 122 aa10.07□□□□□ -0.8
SHR5YOL110W YBL081WP38180 368 aaKnown RBP10.07□□□□□ -0.8
SHR5YOL110W MRPS12P53732 153 aa10.07□□□□□ -0.8
SHR5YOL110W YNR077CP53758 84 aa10.07□□□□□ -0.8
SHR5YOL110W YAL065CO13511 128 aa10.06□□□□□ -0.8
SHR5YOL110W HAP3P13434 144 aa10.06□□□□□ -0.8
SHR5YOL110W VTC1P40046 129 aaRIP-Chip data10.06□□□□□ -0.8not detected
SHR5YOL110W GLC8P41818 229 aa10.05□□□□□ -0.8
SHR5YOL110W OXA1P39952 402 aa10.04□□□□□ -0.8
SHR5YOL110W YDL241WQ07738 123 aa10.04□□□□□ -0.8
SHR5YOL110W LSO2Q3E772 92 aaKnown RBP10.04□□□□□ -0.8
SHR5YOL110W ANB1P19211 157 aa10.03□□□□□ -0.8
SHR5YOL110W YML079WQ03629 201 aa10.02□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms