RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C YNL217WP40152 326 aa1□□□□□ -2.25
SFB2YNL049C YJR111CP47148 283 aaKnown RBP1□□□□□ -2.25
SFB2YNL049C RPL37BP51402 88 aaKnown RBP1□□□□□ -2.25
SFB2YNL049C YMR320WQ04897 101 aa1□□□□□ -2.25
SFB2YNL049C IRC23Q08416 157 aa1□□□□□ -2.25
SFB2YNL049C MRS4P23500 304 aa1□□□□□ -2.25
SFB2YNL049C SPO13P23624 291 aa1□□□□□ -2.25
SFB2YNL049C YHR173CP38864 112 aa1□□□□□ -2.25
SFB2YNL049C YER076CP40049 302 aa1□□□□□ -2.25
SFB2YNL049C PGD1P40356 397 aa1□□□□□ -2.25
SFB2YNL049C CIN5P40917 295 aa1□□□□□ -2.25
SFB2YNL049C ATP19P81451 68 aa1□□□□□ -2.25
SFB2YNL049C EMC6Q12431 108 aa1□□□□□ -2.25
SFB2YNL049C ENV10Q99382 181 aa1□□□□□ -2.25
SFB2YNL049C YAR023CD6VPM8 179 aa0.99□□□□□ -2.25
SFB2YNL049C CKS1P20486 150 aaKnown RBP0.99□□□□□ -2.25
SFB2YNL049C YGR269WP40326 108 aa0.99□□□□□ -2.25
SFB2YNL049C GVP36P40531 326 aaKnown RBP0.99□□□□□ -2.25
SFB2YNL049C JAC1P53193 184 aa0.99□□□□□ -2.25
SFB2YNL049C YNR077CP53758 84 aa0.99□□□□□ -2.25
SFB2YNL049C DYN2Q02647 92 aa0.99□□□□□ -2.25
SFB2YNL049C SKI6P46948 246 aaPredicted RBP0.99□□□□□ -2.25
SFB2YNL049C RGM1Q00453 211 aa0.99□□□□□ -2.25
SFB2YNL049C YMR082CQ04276 118 aa0.99□□□□□ -2.25
SFB2YNL049C YMR090WQ04304 227 aaKnown RBP0.99□□□□□ -2.25
SFB2YNL049C SHH3Q04487 196 aa0.99□□□□□ -2.25
SFB2YNL049C DGA1Q08650 418 aa0.99□□□□□ -2.25
SFB2YNL049C SUS1Q6WNK7 96 aa0.99□□□□□ -2.25
SFB2YNL049C YBR292CP38357 123 aa0.98□□□□□ -2.25
SFB2YNL049C CYB5P40312 120 aa0.98□□□□□ -2.25
SFB2YNL049C YKE4P40544 346 aa0.98□□□□□ -2.25
SFB2YNL049C SVP26P38869 228 aa0.98□□□□□ -2.25
SFB2YNL049C VTC1P40046 129 aaRIP-Chip data0.98□□□□□ -2.25not detected
SFB2YNL049C RPS29AP41057 56 aaKnown RBP0.98□□□□□ -2.25
SFB2YNL049C SER2P42941 309 aa0.98□□□□□ -2.25
SFB2YNL049C TMA20P89886 181 aaPredicted RBP0.98□□□□□ -2.25
SFB2YNL049C NMA1Q06178 401 aaKnown RBP0.98□□□□□ -2.25
SFB2YNL049C YOL014WQ08110 124 aa0.98□□□□□ -2.25
SFB2YNL049C YLR118CQ12354 227 aa0.98□□□□□ -2.25
SFB2YNL049C YDL085C-AQ3E7B7 68 aaKnown RBP0.98□□□□□ -2.25
SFB2YNL049C RPS22AP0C0W1 130 aaKnown RBP0.97□□□□□ -2.25
SFB2YNL049C YEA4P40004 342 aa0.97□□□□□ -2.25
SFB2YNL049C MPC3P53311 146 aa0.97□□□□□ -2.25
SFB2YNL049C YLR031WQ07978 186 aa0.97□□□□□ -2.25
SFB2YNL049C YGR121W-AQ3E816 71 aa0.97□□□□□ -2.25
SFB2YNL049C Q0017Q9ZZX8 53 aa0.97□□□□□ -2.25
SFB2YNL049C DAD3P69850 94 aa0.97□□□□□ -2.25
SFB2YNL049C BUD25P85052 153 aa0.97□□□□□ -2.25
SFB2YNL049C CYT2Q00873 224 aa0.97□□□□□ -2.25
SFB2YNL049C YDR042CQ03205 200 aa0.97□□□□□ -2.25
SFB2YNL049C SHH4Q06236 168 aa0.97□□□□□ -2.25
SFB2YNL049C FSF1Q12029 327 aaKnown RBP0.97□□□□□ -2.25
SFB2YNL049C KSH1Q8TGJ3 72 aa0.97□□□□□ -2.25
SFB2YNL049C RPS25BP0C0T4 108 aaKnown RBP0.96□□□□□ -2.26
SFB2YNL049C SRP21P32342 167 aa0.96□□□□□ -2.26
SFB2YNL049C YEA6P39953 335 aa0.96□□□□□ -2.26
SFB2YNL049C YNL190WP53872 204 aa0.96□□□□□ -2.26
SFB2YNL049C RAV2Q03956 351 aa0.96□□□□□ -2.26
SFB2YNL049C YLR050CQ12155 161 aaKnown RBP0.96□□□□□ -2.26
SFB2YNL049C RPS25AQ3E792 108 aaPredicted RBP0.96□□□□□ -2.26
SFB2YNL049C YML100W-AQ8TGT0 57 aa0.96□□□□□ -2.26
SFB2YNL049C POR1P04840 283 aaKnown RBP0.96□□□□□ -2.26
SFB2YNL049C RPS29BP41058 56 aaKnown RBP0.96□□□□□ -2.26
SFB2YNL049C YGL193CP53097 103 aa0.96□□□□□ -2.26
SFB2YNL049C YCL001W-AP87012 153 aa0.96□□□□□ -2.26
SFB2YNL049C VPS28Q02767 242 aa0.96□□□□□ -2.26
SFB2YNL049C YKL023C-AQ2V2P3 75 aa0.96□□□□□ -2.26
SFB2YNL049C YHR086W-AQ3E746 53 aa0.96□□□□□ -2.26
SFB2YNL049C AHT1P29589 182 aa0.95□□□□□ -2.26
SFB2YNL049C SPT14P32363 452 aa0.95□□□□□ -2.26
SFB2YNL049C FZF1P32805 299 aa0.95□□□□□ -2.26
SFB2YNL049C POC4Q12245 148 aaPredicted RBP0.95□□□□□ -2.26
SFB2YNL049C COA2Q3E823 68 aa0.95□□□□□ -2.26
SFB2YNL049C IPI1P38803 334 aaPredicted RBP0.95□□□□□ -2.26
SFB2YNL049C SPC25P40014 221 aa0.95□□□□□ -2.26
SFB2YNL049C YER134CP40081 178 aa0.95□□□□□ -2.26
SFB2YNL049C PLP1Q04004 230 aa0.95□□□□□ -2.26
SFB2YNL049C YPR014CQ6B0W2 109 aa0.95□□□□□ -2.26
SFB2YNL049C RPL29P05747 59 aaPredicted RBP0.94□□□□□ -2.26
SFB2YNL049C MRPL31P14063 131 aaPredicted RBP0.94□□□□□ -2.26
SFB2YNL049C LSM2P38203 95 aaKnown RBP0.94□□□□□ -2.26
SFB2YNL049C SNU13P39990 126 aaKnown RBP0.94□□□□□ -2.26
SFB2YNL049C PAM16P42949 149 aa0.94□□□□□ -2.26
SFB2YNL049C KNH1P50112 268 aa0.94□□□□□ -2.26
SFB2YNL049C GPI19Q04082 140 aa0.94□□□□□ -2.26
SFB2YNL049C AVO2Q04749 426 aa0.94□□□□□ -2.26
SFB2YNL049C FYV12Q08559 129 aa0.94□□□□□ -2.26
SFB2YNL049C COA3Q3E7B2 85 aa0.94□□□□□ -2.26
SFB2YNL049C YLR236CA0A023PZG4 107 aa0.94□□□□□ -2.26
SFB2YNL049C HAP3P13434 144 aa0.94□□□□□ -2.26
SFB2YNL049C DAD1Q12248 94 aa0.94□□□□□ -2.26
SFB2YNL049C GRX5Q02784 150 aa0.93□□□□□ -2.26
SFB2YNL049C YOR105WQ08504 108 aa0.93□□□□□ -2.26
SFB2YNL049C YBL039W-BP0C268 59 aa0.93□□□□□ -2.26
SFB2YNL049C HMRA1P0CY11 126 aa0.93□□□□□ -2.26
SFB2YNL049C UBC4P15731 148 aa0.93□□□□□ -2.26
SFB2YNL049C POP7P38291 140 aa0.93□□□□□ -2.26
SFB2YNL049C YHR140WP38842 239 aa0.93□□□□□ -2.26
SFB2YNL049C DSE2P38844 325 aa0.93□□□□□ -2.26
SFB2YNL049C YIL163CP40448 117 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms