RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W VPS55P47111 140 aa2.28□□□□□ -2.04
BDP1YNL039W RSF2P46974 1380 aa2.28□□□□□ -2.04
BDP1YNL039W YGR240C-AQ3E786 66 aa2.28□□□□□ -2.04
BDP1YNL039W LAA1P39526 2014 aa2.27□□□□□ -2.05
BDP1YNL039W MRPL31P14063 131 aaPredicted RBP2.27□□□□□ -2.05
BDP1YNL039W LCL2Q08045 131 aa2.27□□□□□ -2.05
BDP1YNL039W YPK9Q12697 1472 aa2.27□□□□□ -2.05
BDP1YNL039W YDR029WQ12111 104 aa2.26□□□□□ -2.05
BDP1YNL039W SSN2P38931 1420 aa2.26□□□□□ -2.05
BDP1YNL039W HMRA1P0CY11 126 aa2.26□□□□□ -2.05
BDP1YNL039W PAU5P43575 122 aa2.26□□□□□ -2.05
BDP1YNL039W YOL118CQ08259 102 aa2.26□□□□□ -2.05
BDP1YNL039W HUA1P40325 198 aa2.25□□□□□ -2.05
BDP1YNL039W MVB12P42939 101 aa2.25□□□□□ -2.05
BDP1YNL039W RRT15Q3E811 62 aa2.25□□□□□ -2.05
BDP1YNL039W SEC7P11075 2009 aaKnown RBP2.24□□□□□ -2.05
BDP1YNL039W RPA190P10964 1664 aaKnown RBP2.24□□□□□ -2.05
BDP1YNL039W YHL005CP38752 130 aa2.23□□□□□ -2.05
BDP1YNL039W MRPS12P53732 153 aa2.23□□□□□ -2.05
BDP1YNL039W HUG1Q6Q5K6 68 aa2.23□□□□□ -2.05
BDP1YNL039W PDR10P51533 1564 aa2.23□□□□□ -2.05
BDP1YNL039W YGL194C-AQ2V2P6 80 aa2.23□□□□□ -2.05
BDP1YNL039W ROX3P25046 220 aa2.22□□□□□ -2.05
BDP1YNL039W YCR095W-AQ3E787 52 aa2.22□□□□□ -2.05
BDP1YNL039W SNU13P39990 126 aaKnown RBP2.21□□□□□ -2.06
BDP1YNL039W SCP1Q08873 200 aa2.21□□□□□ -2.06
BDP1YNL039W GCV3P39726 170 aaPredicted RBP2.2□□□□□ -2.06
BDP1YNL039W HHY1P39982 102 aa2.2□□□□□ -2.06
BDP1YNL039W SUS1Q6WNK7 96 aa2.2□□□□□ -2.06
BDP1YNL039W URB1P34241 1764 aaKnown RBP2.19□□□□□ -2.06
BDP1YNL039W CCW14O13547 238 aa2.19□□□□□ -2.06
BDP1YNL039W IMP2P46972 177 aa2.19□□□□□ -2.06
BDP1YNL039W BRR2P32639 2163 aaKnown RBP2.19□□□□□ -2.06
BDP1YNL039W BPT1P14772 1559 aa2.19□□□□□ -2.06
BDP1YNL039W SNA2P56508 79 aa2.17□□□□□ -2.06
BDP1YNL039W LCL1Q02786 101 aa2.17□□□□□ -2.06
BDP1YNL039W YMR082CQ04276 118 aa2.17□□□□□ -2.06
BDP1YNL039W ECM12O13529 151 aa2.16□□□□□ -2.06
BDP1YNL039W YDR042CQ03205 200 aa2.16□□□□□ -2.06
BDP1YNL039W YHR213W-BQ8TGK1 99 aa2.16□□□□□ -2.06
BDP1YNL039W NHP10Q03435 203 aa2.15□□□□□ -2.06
BDP1YNL039W ESC1Q03661 1658 aaKnown RBP2.15□□□□□ -2.06
BDP1YNL039W RSM18P40033 138 aa2.15□□□□□ -2.07
BDP1YNL039W YPL038W-AQ3E7B4 63 aa2.15□□□□□ -2.07
BDP1YNL039W SEC16P48415 2195 aaKnown RBP2.15□□□□□ -2.07
BDP1YNL039W LTE1P07866 1435 aa2.15□□□□□ -2.07
BDP1YNL039W YDR210WQ03482 75 aa2.14□□□□□ -2.07
BDP1YNL039W PAU6P0CE90 120 aa2.13□□□□□ -2.07
BDP1YNL039W PAU18P0CE91 120 aa2.13□□□□□ -2.07
BDP1YNL039W YMR141CP40211 102 aa2.12□□□□□ -2.07
BDP1YNL039W SRB8P25648 1427 aa2.11□□□□□ -2.07
BDP1YNL039W YJR128WP47162 119 aa2.11□□□□□ -2.07
BDP1YNL039W COX12Q01519 83 aa2.11□□□□□ -2.07
BDP1YNL039W SWR1Q05471 1514 aa2.11□□□□□ -2.07
BDP1YNL039W ICY1Q04329 127 aa2.1□□□□□ -2.07
BDP1YNL039W YLR255CO13574 117 aa2.1□□□□□ -2.07
BDP1YNL039W YBL071CP38185 102 aa2.1□□□□□ -2.07
BDP1YNL039W SPC1P46965 94 aa2.1□□□□□ -2.07
BDP1YNL039W URA2P07259 2214 aaKnown RBP2.1□□□□□ -2.07
BDP1YNL039W MRP17P28778 131 aa2.09□□□□□ -2.07
BDP1YNL039W MRPL38P35996 138 aaPredicted RBP2.09□□□□□ -2.07
BDP1YNL039W RPL37AP49166 88 aaKnown RBP2.09□□□□□ -2.07
BDP1YNL039W YRF1-1P0CX20 1796 aa2.08□□□□□ -2.08
BDP1YNL039W YRF1-5P0CX21 1796 aa2.08□□□□□ -2.08
BDP1YNL039W YRF1-8P0CX22 1796 aa2.08□□□□□ -2.08
BDP1YNL039W GDB1Q06625 1536 aa2.07□□□□□ -2.08
BDP1YNL039W YSP2Q06681 1438 aa2.06□□□□□ -2.08
BDP1YNL039W YIL086CP40503 102 aa2.06□□□□□ -2.08
BDP1YNL039W MRX7P53869 86 aa2.06□□□□□ -2.08
BDP1YNL039W NTE1Q04958 1679 aa2.06□□□□□ -2.08
BDP1YNL039W MHF2Q3E829 80 aa2.05□□□□□ -2.08
BDP1YNL039W YNR034W-AQ3E841 98 aa2.05□□□□□ -2.08
BDP1YNL039W POL2P21951 2222 aaKnown RBP2.05□□□□□ -2.08
BDP1YNL039W SHU1P38751 150 aa2.05□□□□□ -2.08
BDP1YNL039W AIM19P40502 157 aa2.03□□□□□ -2.08
BDP1YNL039W TY4B-HP0C2J7 1802 aa2.03□□□□□ -2.08
BDP1YNL039W YOR034C-AQ3E735 80 aa2.03□□□□□ -2.09
BDP1YNL039W PAU1P0CE88 120 aa2.02□□□□□ -2.09
BDP1YNL039W PAU14P0CE89 120 aa2.02□□□□□ -2.09
BDP1YNL039W PAU8P0CE92 120 aa2.02□□□□□ -2.09
BDP1YNL039W PAU11P0CE93 120 aa2.02□□□□□ -2.09
BDP1YNL039W NHP2P32495 156 aaPredicted RBP2.02□□□□□ -2.09
BDP1YNL039W PAU13P38725 120 aa2.02□□□□□ -2.09
BDP1YNL039W MPC2P38857 129 aa2.02□□□□□ -2.09
BDP1YNL039W PAU10Q03050 120 aa2.02□□□□□ -2.09
BDP1YNL039W PAU20Q08322 120 aa2.02□□□□□ -2.09
BDP1YNL039W COX19Q3E731 98 aa2.02□□□□□ -2.09
BDP1YNL039W PAU9Q3E770 120 aa2.02□□□□□ -2.09
BDP1YNL039W POL1P13382 1468 aa2.02□□□□□ -2.09
BDP1YNL039W YMR175W-AQ3E766 64 aa2.01□□□□□ -2.09
BDP1YNL039W YKL068W-AQ3E826 78 aa2.01□□□□□ -2.09
BDP1YNL039W PAU4P53427 120 aa2□□□□□ -2.09
BDP1YNL039W CWP2P43497 92 aa1.99□□□□□ -2.09
BDP1YNL039W RPS11AP0CX47 156 aaKnown RBP1.98□□□□□ -2.09
BDP1YNL039W RPS11BP0CX48 156 aaKnown RBP1.98□□□□□ -2.09
BDP1YNL039W YBR292CP38357 123 aa1.98□□□□□ -2.09
BDP1YNL039W RPL43AP0CX25 92 aaKnown RBP1.96□□□□□ -2.1
BDP1YNL039W RPL43BP0CX26 92 aa1.96□□□□□ -2.1
BDP1YNL039W YCR085WP25650 117 aa1.95□□□□□ -2.1
BDP1YNL039W BSC4P53841 131 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms