RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C MSL1P40567 111 aaPredicted RBP2□□□□□ -2.09
PEX12YMR026C HFA1P32874 2273 aa2□□□□□ -2.09
PEX12YMR026C SLH1P53327 1967 aaKnown RBP1.99□□□□□ -2.09
PEX12YMR026C RPS22AP0C0W1 130 aaKnown RBP1.99□□□□□ -2.09
PEX12YMR026C LSM6Q06406 86 aaKnown RBP1.99□□□□□ -2.09
PEX12YMR026C YDR029WQ12111 104 aa1.99□□□□□ -2.09
PEX12YMR026C RPS22BQ3E7Y3 130 aaKnown RBP1.99□□□□□ -2.09
PEX12YMR026C RRT15Q3E811 62 aa1.99□□□□□ -2.09
PEX12YMR026C ENV10Q99382 181 aa1.99□□□□□ -2.09
PEX12YMR026C LTE1P07866 1435 aa1.99□□□□□ -2.09
PEX12YMR026C HUA1P40325 198 aa1.98□□□□□ -2.09
PEX12YMR026C MRPS12P53732 153 aa1.98□□□□□ -2.09
PEX12YMR026C CCW14O13547 238 aa1.97□□□□□ -2.09
PEX12YMR026C YMR082CQ04276 118 aa1.97□□□□□ -2.09
PEX12YMR026C YGL194C-AQ2V2P6 80 aa1.97□□□□□ -2.09
PEX12YMR026C MRPL31P14063 131 aaPredicted RBP1.96□□□□□ -2.1
PEX12YMR026C SRB6P32570 121 aa1.96□□□□□ -2.1
PEX12YMR026C SNU13P39990 126 aaKnown RBP1.96□□□□□ -2.1
PEX12YMR026C YSP2Q06681 1438 aa1.95□□□□□ -2.1
PEX12YMR026C HMRA1P0CY11 126 aa1.95□□□□□ -2.1
PEX12YMR026C ROX3P25046 220 aa1.95□□□□□ -2.1
PEX12YMR026C PAU5P43575 122 aa1.95□□□□□ -2.1
PEX12YMR026C YOL118CQ08259 102 aa1.95□□□□□ -2.1
PEX12YMR026C YDR210WQ03482 75 aa1.94□□□□□ -2.1
PEX12YMR026C LCL2Q08045 131 aa1.94□□□□□ -2.1
PEX12YMR026C SCP1Q08873 200 aa1.94□□□□□ -2.1
PEX12YMR026C SWR1Q05471 1514 aa1.94□□□□□ -2.1
PEX12YMR026C YDR042CQ03205 200 aa1.93□□□□□ -2.1
PEX12YMR026C YMR007WQ03675 126 aa1.93□□□□□ -2.1
PEX12YMR026C MYO1P08964 1928 aa1.93□□□□□ -2.1
PEX12YMR026C NTE1Q04958 1679 aa1.93□□□□□ -2.1
PEX12YMR026C HUG1Q6Q5K6 68 aa1.92□□□□□ -2.1
PEX12YMR026C URB1P34241 1764 aaKnown RBP1.91□□□□□ -2.1
PEX12YMR026C ECM12O13529 151 aa1.91□□□□□ -2.1
PEX12YMR026C GCV3P39726 170 aaPredicted RBP1.91□□□□□ -2.1
PEX12YMR026C IMP2P46972 177 aa1.91□□□□□ -2.1
PEX12YMR026C NHP10Q03435 203 aa1.91□□□□□ -2.1
PEX12YMR026C YCR095W-AQ3E787 52 aa1.91□□□□□ -2.1
PEX12YMR026C GDB1Q06625 1536 aa1.9□□□□□ -2.11
PEX12YMR026C RSM18P40033 138 aa1.89□□□□□ -2.11
PEX12YMR026C SUS1Q6WNK7 96 aa1.89□□□□□ -2.11
PEX12YMR026C MVB12P42939 101 aa1.88□□□□□ -2.11
PEX12YMR026C LCL1Q02786 101 aa1.87□□□□□ -2.11
PEX12YMR026C POL1P13382 1468 aa1.87□□□□□ -2.11
PEX12YMR026C SRB8P25648 1427 aa1.86□□□□□ -2.11
PEX12YMR026C YLR255CO13574 117 aa1.86□□□□□ -2.11
PEX12YMR026C MRPL38P35996 138 aaPredicted RBP1.86□□□□□ -2.11
PEX12YMR026C ICY1Q04329 127 aa1.86□□□□□ -2.11
PEX12YMR026C YHR213W-BQ8TGK1 99 aa1.86□□□□□ -2.11
PEX12YMR026C HHY1P39982 102 aa1.85□□□□□ -2.11
PEX12YMR026C YPL038W-AQ3E7B4 63 aa1.85□□□□□ -2.11
PEX12YMR026C SEC7P11075 2009 aaKnown RBP1.84□□□□□ -2.11
PEX12YMR026C RPL37AP49166 88 aaKnown RBP1.84□□□□□ -2.11
PEX12YMR026C SNA2P56508 79 aa1.84□□□□□ -2.11
PEX12YMR026C COX12Q01519 83 aa1.84□□□□□ -2.11
PEX12YMR026C YMR175W-AQ3E766 64 aa1.84□□□□□ -2.11
PEX12YMR026C YBL071CP38185 102 aa1.82□□□□□ -2.12
PEX12YMR026C SEC16P48415 2195 aaKnown RBP1.82□□□□□ -2.12
PEX12YMR026C ESP1Q03018 1630 aa1.81□□□□□ -2.12
PEX12YMR026C PAU6P0CE90 120 aa1.81□□□□□ -2.12
PEX12YMR026C PAU18P0CE91 120 aa1.81□□□□□ -2.12
PEX12YMR026C YMR141CP40211 102 aa1.81□□□□□ -2.12
PEX12YMR026C YJR128WP47162 119 aa1.81□□□□□ -2.12
PEX12YMR026C MRP17P28778 131 aa1.8□□□□□ -2.12
PEX12YMR026C YIL086CP40503 102 aa1.8□□□□□ -2.12
PEX12YMR026C SPC1P46965 94 aa1.8□□□□□ -2.12
PEX12YMR026C COX19Q3E731 98 aa1.8□□□□□ -2.12
PEX12YMR026C BRR2P32639 2163 aaKnown RBP1.8□□□□□ -2.12
PEX12YMR026C YRF1-1P0CX20 1796 aa1.8□□□□□ -2.12
PEX12YMR026C YRF1-5P0CX21 1796 aa1.8□□□□□ -2.12
PEX12YMR026C YRF1-8P0CX22 1796 aa1.8□□□□□ -2.12
PEX12YMR026C MRX7P53869 86 aa1.79□□□□□ -2.12
PEX12YMR026C YKL068W-AQ3E826 78 aa1.79□□□□□ -2.12
PEX12YMR026C LAA1P39526 2014 aa1.79□□□□□ -2.12
PEX12YMR026C AIM19P40502 157 aa1.78□□□□□ -2.12
PEX12YMR026C YNR034W-AQ3E841 98 aa1.78□□□□□ -2.12
PEX12YMR026C MHF2Q3E829 80 aa1.77□□□□□ -2.13
PEX12YMR026C YRF1-2P40105 1681 aa1.77□□□□□ -2.13
PEX12YMR026C RPS11AP0CX47 156 aaKnown RBP1.76□□□□□ -2.13
PEX12YMR026C RPS11BP0CX48 156 aaKnown RBP1.76□□□□□ -2.13
PEX12YMR026C TY1B-PR2P0C2J0 1756 aa1.76□□□□□ -2.13
PEX12YMR026C SHU1P38751 150 aa1.75□□□□□ -2.13
PEX12YMR026C YOR034C-AQ3E735 80 aa1.75□□□□□ -2.13
PEX12YMR026C NHP2P32495 156 aaPredicted RBP1.74□□□□□ -2.13
PEX12YMR026C RPA12P32529 125 aaKnown RBP1.74□□□□□ -2.13
PEX12YMR026C MPC2P38857 129 aa1.74□□□□□ -2.13
PEX12YMR026C POC4Q12245 148 aaPredicted RBP1.74□□□□□ -2.13
PEX12YMR026C YCR085WP25650 117 aa1.73□□□□□ -2.13
PEX12YMR026C YBR292CP38357 123 aa1.73□□□□□ -2.13
PEX12YMR026C CWP2P43497 92 aa1.72□□□□□ -2.13
PEX12YMR026C PAU1P0CE88 120 aa1.71□□□□□ -2.14
PEX12YMR026C PAU14P0CE89 120 aa1.71□□□□□ -2.14
PEX12YMR026C PAU8P0CE92 120 aa1.71□□□□□ -2.14
PEX12YMR026C PAU11P0CE93 120 aa1.71□□□□□ -2.14
PEX12YMR026C PAU13P38725 120 aa1.71□□□□□ -2.14
PEX12YMR026C PAU10Q03050 120 aa1.71□□□□□ -2.14
PEX12YMR026C PAU9Q3E770 120 aa1.71□□□□□ -2.14
PEX12YMR026C URA2P07259 2214 aaKnown RBP1.71□□□□□ -2.14
PEX12YMR026C POL2P21951 2222 aaKnown RBP1.7□□□□□ -2.14
PEX12YMR026C PAU20Q08322 120 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms