RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C YMR141CP40211 102 aa2.51□□□□□ -2.01
VPS33YLR396C MRPL49P40858 161 aaPredicted RBP2.51□□□□□ -2.01
VPS33YLR396C FIP1P45976 327 aa2.51□□□□□ -2.01
VPS33YLR396C CAX4P53223 239 aa2.51□□□□□ -2.01
VPS33YLR396C ABF2Q02486 183 aa2.51□□□□□ -2.01
VPS33YLR396C COF1Q03048 143 aaKnown RBP2.51□□□□□ -2.01
VPS33YLR396C AIM34Q03673 198 aa2.51□□□□□ -2.01
VPS33YLR396C MIX14Q04341 121 aa2.51□□□□□ -2.01
VPS33YLR396C YPL261CQ08976 102 aa2.51□□□□□ -2.01
VPS33YLR396C YDL012CQ12489 107 aa2.51□□□□□ -2.01
VPS33YLR396C RPS28AQ3E7X9 67 aaPredicted RBP2.51□□□□□ -2.01
VPS33YLR396C Q0255P03881 472 aa2.5□□□□□ -2.01
VPS33YLR396C VTC1P40046 129 aaRIP-Chip data2.5□□□□□ -2.01not detected
VPS33YLR396C COX12Q01519 83 aa2.5□□□□□ -2.01
VPS33YLR396C NIP7Q08962 181 aaKnown RBP2.5□□□□□ -2.01
VPS33YLR396C YDR524C-BQ3E6R4 66 aa2.5□□□□□ -2.01
VPS33YLR396C BRR2P32639 2163 aaKnown RBP2.5□□□□□ -2.01
VPS33YLR396C YHR139C-AO13536 103 aa2.49□□□□□ -2.01
VPS33YLR396C RPS27AP35997 82 aaKnown RBP2.49□□□□□ -2.01
VPS33YLR396C YKL070WP36087 169 aa2.49□□□□□ -2.01
VPS33YLR396C RPS27BP38711 82 aa2.49□□□□□ -2.01
VPS33YLR396C ECO1P43605 281 aa2.49□□□□□ -2.01
VPS33YLR396C SBH1P52870 82 aa2.49□□□□□ -2.01
VPS33YLR396C ALG13P53178 202 aa2.49□□□□□ -2.01
VPS33YLR396C DAD4P69851 72 aa2.49□□□□□ -2.01
VPS33YLR396C DAD1Q12248 94 aa2.49□□□□□ -2.01
VPS33YLR396C TIM22Q12328 207 aa2.49□□□□□ -2.01
VPS33YLR396C YMR31P19955 123 aa2.49□□□□□ -2.01
VPS33YLR396C YNL217WP40152 326 aa2.49□□□□□ -2.01
VPS33YLR396C YIA6P40556 373 aa2.49□□□□□ -2.01
VPS33YLR396C MGR2Q02889 113 aa2.49□□□□□ -2.01
VPS33YLR396C UPS1Q05776 175 aa2.49□□□□□ -2.01
VPS33YLR396C VPS13Q07878 3144 aa2.48□□□□□ -2.01
VPS33YLR396C RPL2AP0CX45 254 aaKnown RBP2.48□□□□□ -2.01
VPS33YLR396C RPL2BP0CX46 254 aaKnown RBP2.48□□□□□ -2.01
VPS33YLR396C HMRA2P0CY13 119 aa2.48□□□□□ -2.01
VPS33YLR396C INO2P26798 304 aa2.48□□□□□ -2.01
VPS33YLR396C FPR2P32472 135 aa2.48□□□□□ -2.01
VPS33YLR396C YHL042WP38729 150 aa2.48□□□□□ -2.01
VPS33YLR396C YFL051CP43552 160 aa2.48□□□□□ -2.01
VPS33YLR396C HSK3P69852 69 aa2.48□□□□□ -2.01
VPS33YLR396C COA3Q3E7B2 85 aa2.48□□□□□ -2.01
VPS33YLR396C YPL038W-AQ3E7B4 63 aa2.48□□□□□ -2.01
VPS33YLR396C IGO2Q9P305 131 aa2.48□□□□□ -2.01
VPS33YLR396C RPL18AP0CX49 186 aaKnown RBP2.48□□□□□ -2.01
VPS33YLR396C RPL18BP0CX50 186 aaKnown RBP2.48□□□□□ -2.01
VPS33YLR396C KTI12P34253 313 aaKnown RBP2.48□□□□□ -2.01
VPS33YLR396C RRT13P40042 185 aa2.48□□□□□ -2.01
VPS33YLR396C GON7P46984 123 aa2.48□□□□□ -2.01
VPS33YLR396C SWS2P53937 143 aa2.48□□□□□ -2.01
VPS33YLR396C GPI19Q04082 140 aa2.48□□□□□ -2.01
VPS33YLR396C MRPL23Q12487 163 aaPredicted RBP2.48□□□□□ -2.01
VPS33YLR396C YCR050CP25630 102 aa2.47□□□□□ -2.01
VPS33YLR396C TOM6P33448 61 aa2.47□□□□□ -2.01
VPS33YLR396C PFY1P07274 126 aa2.46□□□□□ -2.01
VPS33YLR396C AIM11P87275 137 aa2.46□□□□□ -2.01
VPS33YLR396C IRC23Q08416 157 aa2.46□□□□□ -2.01
VPS33YLR396C YDR381C-AQ3E6R5 114 aa2.46□□□□□ -2.01
VPS33YLR396C YAL067W-AQ8TGK6 75 aa2.46□□□□□ -2.01
VPS33YLR396C MED6P38782 295 aa2.46□□□□□ -2.02
VPS33YLR396C YLR194CQ05777 254 aa2.46□□□□□ -2.02
VPS33YLR396C YLR042CQ07990 161 aa2.46□□□□□ -2.02
VPS33YLR396C PRM7Q12459 698 aa2.46□□□□□ -2.02
VPS33YLR396C PBI2P0CT04 75 aaKnown RBP2.45□□□□□ -2.02
VPS33YLR396C FPR1P20081 114 aaKnown RBP2.45□□□□□ -2.02
VPS33YLR396C YBL071CP38185 102 aa2.45□□□□□ -2.02
VPS33YLR396C TOS6P48560 102 aa2.45□□□□□ -2.02
VPS33YLR396C NRM1P53718 249 aa2.45□□□□□ -2.02
VPS33YLR396C FAS1P07149 2051 aaKnown RBP2.45□□□□□ -2.02
VPS33YLR396C YHL018WP38744 120 aaPredicted RBP2.45□□□□□ -2.02
VPS33YLR396C AIM19P40502 157 aa2.45□□□□□ -2.02
VPS33YLR396C YNL190WP53872 204 aa2.45□□□□□ -2.02
VPS33YLR396C YDR114CQ04597 100 aa2.45□□□□□ -2.02
VPS33YLR396C SVP26P38869 228 aa2.44□□□□□ -2.02
VPS33YLR396C GLE2P40066 365 aa2.44□□□□□ -2.02
VPS33YLR396C SPI1P40092 148 aa2.44□□□□□ -2.02
VPS33YLR396C YDR209CQ03480 137 aa2.44□□□□□ -2.02
VPS33YLR396C YMR320WQ04897 101 aa2.44□□□□□ -2.02
VPS33YLR396C SHH4Q06236 168 aa2.44□□□□□ -2.02
VPS33YLR396C YLR342W-AQ3E810 57 aa2.44□□□□□ -2.02
VPS33YLR396C IRA2P19158 3079 aa2.44□□□□□ -2.02
VPS33YLR396C RPL28P02406 149 aaKnown RBP2.43□□□□□ -2.02
VPS33YLR396C SPS100P13130 326 aa2.43□□□□□ -2.02
VPS33YLR396C ATP15P21306 62 aa2.43□□□□□ -2.02
VPS33YLR396C IMP2P46972 177 aa2.43□□□□□ -2.02
VPS33YLR396C RRS1Q08746 203 aaKnown RBP2.43□□□□□ -2.02
VPS33YLR396C YMR175W-AQ3E766 64 aa2.43□□□□□ -2.02
VPS33YLR396C KTI11Q3E840 82 aa2.43□□□□□ -2.02
VPS33YLR396C KSH1Q8TGJ3 72 aa2.43□□□□□ -2.02
VPS33YLR396C YHR213WP0CI67 198 aa2.43□□□□□ -2.02
VPS33YLR396C YHR214C-DP0CX93 97 aa2.43□□□□□ -2.02
VPS33YLR396C YLR412C-AQ3E742 68 aa2.43□□□□□ -2.02
VPS33YLR396C YRA2P36036 203 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
VPS33YLR396C YBR209WP38311 105 aa2.42□□□□□ -2.02
VPS33YLR396C YSY6P38374 65 aa2.42□□□□□ -2.02
VPS33YLR396C YIL086CP40503 102 aa2.42□□□□□ -2.02
VPS33YLR396C MRPS12P53732 153 aa2.42□□□□□ -2.02
VPS33YLR396C SDC1Q03323 175 aa2.42□□□□□ -2.02
VPS33YLR396C EMC6Q12431 108 aa2.42□□□□□ -2.02
VPS33YLR396C YER187WP40102 141 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 100.7 ms