RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YPR014CQ6B0W2 109 aa3.33□□□□□ -1.88
CBF5YLR175W RPL27BP0C2H7 136 aaKnown RBP3.32□□□□□ -1.88
CBF5YLR175W UBC5P15732 148 aa3.32□□□□□ -1.88
CBF5YLR175W MRP49P32388 137 aa3.32□□□□□ -1.88
CBF5YLR175W POP3P53833 195 aaPredicted RBP3.32□□□□□ -1.88
CBF5YLR175W DGA1Q08650 418 aa3.32□□□□□ -1.88
CBF5YLR175W RPS8AP0CX39 200 aaKnown RBP3.31□□□□□ -1.88
CBF5YLR175W RPS8BP0CX40 200 aaKnown RBP3.31□□□□□ -1.88
CBF5YLR175W PRE1P22141 198 aaKnown RBP3.31□□□□□ -1.88
CBF5YLR175W PMP3P87284 55 aa3.31□□□□□ -1.88
CBF5YLR175W HAL1Q01766 294 aa3.31□□□□□ -1.88
CBF5YLR175W DPP1Q05521 289 aa3.31□□□□□ -1.88
CBF5YLR175W YLR050CQ12155 161 aaKnown RBP3.31□□□□□ -1.88
CBF5YLR175W YJR146WP47174 117 aa3.3□□□□□ -1.88
CBF5YLR175W CGR1P53188 120 aa3.3□□□□□ -1.88
CBF5YLR175W ERI1P62651 68 aaKnown RBP3.3□□□□□ -1.88
CBF5YLR175W YOR008C-AQ3E7B9 74 aa3.3□□□□□ -1.88
CBF5YLR175W TRP1P00912 224 aa3.29□□□□□ -1.88
CBF5YLR175W RPL16AP26784 199 aaKnown RBP3.29□□□□□ -1.88
CBF5YLR175W YRA2P36036 203 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
CBF5YLR175W YLR112WQ12130 139 aa3.29□□□□□ -1.88
CBF5YLR175W FYV7Q12247 151 aa3.29□□□□□ -1.88
CBF5YLR175W TPT1Q12272 230 aaKnown RBP3.29□□□□□ -1.88
CBF5YLR175W CRC1Q12289 327 aa3.29□□□□□ -1.88
CBF5YLR175W COA3Q3E7B2 85 aa3.29□□□□□ -1.88
CBF5YLR175W YMR122W-AQ3E842 84 aa3.29□□□□□ -1.88
CBF5YLR175W APS1P35181 156 aa3.28□□□□□ -1.88
CBF5YLR175W PKR1Q03880 122 aaKnown RBP3.28□□□□□ -1.88
CBF5YLR175W YMR103CQ04436 120 aa3.28□□□□□ -1.88
CBF5YLR175W HMRA2P0CY13 119 aa3.28□□□□□ -1.88
CBF5YLR175W SEC11P15367 167 aa3.28□□□□□ -1.88
CBF5YLR175W FUN14P18411 198 aa3.28□□□□□ -1.88
CBF5YLR175W FYV4P38783 130 aaPredicted RBP3.28□□□□□ -1.88
CBF5YLR175W ARC15P40518 154 aaRIP-Chip data3.28□□□□□ -1.88not detected
CBF5YLR175W HAC1P41546 238 aa3.28□□□□□ -1.88
CBF5YLR175W SPC1P46965 94 aa3.28□□□□□ -1.88
CBF5YLR175W YNL162W-AQ3E7A8 72 aa3.28□□□□□ -1.88
CBF5YLR175W ADH2P00331 348 aaKnown RBP3.27□□□□□ -1.89
CBF5YLR175W YCR007CP25354 239 aa3.27□□□□□ -1.89
CBF5YLR175W YPT53P36019 220 aa3.27□□□□□ -1.89
CBF5YLR175W YKL070WP36087 169 aa3.27□□□□□ -1.89
CBF5YLR175W RPL32P38061 130 aaKnown RBP3.27□□□□□ -1.89
CBF5YLR175W YGL230CP53074 147 aa3.27□□□□□ -1.89
CBF5YLR175W SCM4P32564 187 aa3.26□□□□□ -1.89
CBF5YLR175W YKL044WP36092 106 aa3.26□□□□□ -1.89
CBF5YLR175W YAR029WP39549 74 aa3.26□□□□□ -1.89
CBF5YLR175W BET5Q03630 159 aa3.26□□□□□ -1.89
CBF5YLR175W YDL157CQ12082 118 aa3.26□□□□□ -1.89
CBF5YLR175W LSO2Q3E772 92 aaKnown RBP3.26□□□□□ -1.89
CBF5YLR175W YPR010C-AA5Z2X5 72 aa3.25□□□□□ -1.89
CBF5YLR175W RPL31AP0C2H8 113 aaKnown RBP3.25□□□□□ -1.89
CBF5YLR175W MRPL44P19956 98 aa3.25□□□□□ -1.89
CBF5YLR175W AIM29P36154 155 aa3.25□□□□□ -1.89
CBF5YLR175W YEL008WP40001 126 aa3.25□□□□□ -1.89
CBF5YLR175W ERG28P40030 148 aa3.25□□□□□ -1.89
CBF5YLR175W YIL059CP40520 121 aa3.25□□□□□ -1.89
CBF5YLR175W YDL085C-AQ3E7B7 68 aaKnown RBP3.25□□□□□ -1.89
CBF5YLR175W RPL33AP05744 107 aaKnown RBP3.24□□□□□ -1.89
CBF5YLR175W ATP5P09457 212 aa3.24□□□□□ -1.89
CBF5YLR175W YBR209WP38311 105 aa3.24□□□□□ -1.89
CBF5YLR175W MSL1P40567 111 aaPredicted RBP3.24□□□□□ -1.89
CBF5YLR175W RPR2P40571 144 aa3.24□□□□□ -1.89
CBF5YLR175W RPL33BP41056 107 aaKnown RBP3.24□□□□□ -1.89
CBF5YLR175W YLR194CQ05777 254 aa3.24□□□□□ -1.89
CBF5YLR175W NAT5Q08689 176 aa3.24□□□□□ -1.89
CBF5YLR175W DFM1Q12743 341 aaKnown RBP3.24□□□□□ -1.89
CBF5YLR175W SCS22Q6Q595 175 aa3.24□□□□□ -1.89
CBF5YLR175W YLL066W-BQ8TGJ7 56 aa3.24□□□□□ -1.89
CBF5YLR175W YCL021W-AQ96VH3 125 aa3.24□□□□□ -1.89
CBF5YLR175W YGL088WP53151 121 aa3.23□□□□□ -1.89
CBF5YLR175W ATP15P21306 62 aa3.22□□□□□ -1.89
CBF5YLR175W AIM11P87275 137 aa3.22□□□□□ -1.89
CBF5YLR175W RTC6O14464 93 aa3.22□□□□□ -1.89
CBF5YLR175W YDL022C-AP0C5L6 82 aa3.22□□□□□ -1.89
CBF5YLR175W YKR041WP36134 250 aa3.22□□□□□ -1.89
CBF5YLR175W YBR219CP38317 127 aa3.22□□□□□ -1.89
CBF5YLR175W PEX17P40155 199 aa3.22□□□□□ -1.89
CBF5YLR175W SAE3P89114 91 aa3.22□□□□□ -1.89
CBF5YLR175W PAU23Q07987 124 aa3.22□□□□□ -1.89
CBF5YLR175W YPL261CQ08976 102 aa3.22□□□□□ -1.89
CBF5YLR175W PAU17Q12370 124 aa3.22□□□□□ -1.89
CBF5YLR175W ENV10Q99382 181 aa3.22□□□□□ -1.89
CBF5YLR175W YER085CP40058 173 aa3.21□□□□□ -1.9
CBF5YLR175W YPL073CP40323 161 aa3.21□□□□□ -1.9
CBF5YLR175W YDR115WQ04598 105 aa3.21□□□□□ -1.9
CBF5YLR175W YMR320WQ04897 101 aa3.21□□□□□ -1.9
CBF5YLR175W PBA1Q05778 276 aa3.21□□□□□ -1.9
CBF5YLR175W YMR175W-AQ3E766 64 aa3.21□□□□□ -1.9
CBF5YLR175W QCR8P08525 94 aa3.2□□□□□ -1.9
CBF5YLR175W SHU1P38751 150 aa3.2□□□□□ -1.9
CBF5YLR175W RPC10P40422 70 aa3.2□□□□□ -1.9
CBF5YLR175W YMR295CQ03559 197 aa3.2□□□□□ -1.9
CBF5YLR175W COX14P39103 70 aa3.19□□□□□ -1.9
CBF5YLR175W YEL067CP39978 195 aa3.19□□□□□ -1.9
CBF5YLR175W PPT2Q12036 173 aa3.19□□□□□ -1.9
CBF5YLR175W IGO2Q9P305 131 aa3.19□□□□□ -1.9
CBF5YLR175W YAL065CO13511 128 aa3.18□□□□□ -1.9
CBF5YLR175W RPL18AP0CX49 186 aaKnown RBP3.18□□□□□ -1.9
CBF5YLR175W RPL18BP0CX50 186 aaKnown RBP3.18□□□□□ -1.9
CBF5YLR175W YNR077CP53758 84 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms