RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C YOR289WQ12012 251 aaPredicted RBP1.1□□□□□ -2.23
NYV1YLR093C GEA2P39993 1459 aaKnown RBP1.1□□□□□ -2.23
NYV1YLR093C EMC5P40540 141 aa1.09□□□□□ -2.23
NYV1YLR093C YJR128WP47162 119 aa1.09□□□□□ -2.23
NYV1YLR093C YCL048W-AQ2V2Q2 79 aa1.09□□□□□ -2.23
NYV1YLR093C YCR095W-AQ3E787 52 aa1.09□□□□□ -2.23
NYV1YLR093C RRT15Q3E811 62 aa1.09□□□□□ -2.23
NYV1YLR093C YCL001W-BQ96VH2 84 aa1.09□□□□□ -2.23
NYV1YLR093C HMRA1P0CY11 126 aa1.08□□□□□ -2.24
NYV1YLR093C REV3P14284 1504 aa1.08□□□□□ -2.24
NYV1YLR093C CAT8P39113 1433 aa1.07□□□□□ -2.24
NYV1YLR093C YPK9Q12697 1472 aa1.07□□□□□ -2.24
NYV1YLR093C YLR255CO13574 117 aa1.07□□□□□ -2.24
NYV1YLR093C IMP2P46972 177 aa1.07□□□□□ -2.24
NYV1YLR093C YPL038W-AQ3E7B4 63 aa1.07□□□□□ -2.24
NYV1YLR093C YRF1-3P0CX14 1859 aa1.07□□□□□ -2.24
NYV1YLR093C YRF1-7P0CX15 1859 aa1.07□□□□□ -2.24
NYV1YLR093C CCW14O13547 238 aa1.06□□□□□ -2.24
NYV1YLR093C PAU6P0CE90 120 aa1.06□□□□□ -2.24
NYV1YLR093C PAU18P0CE91 120 aa1.06□□□□□ -2.24
NYV1YLR093C ROX3P25046 220 aa1.06□□□□□ -2.24
NYV1YLR093C MSL1P40567 111 aaPredicted RBP1.06□□□□□ -2.24
NYV1YLR093C SNA2P56508 79 aa1.06□□□□□ -2.24
NYV1YLR093C YOR034C-AQ3E735 80 aa1.06□□□□□ -2.24
NYV1YLR093C RSF2P46974 1380 aa1.06□□□□□ -2.24
NYV1YLR093C YER188C-AP0C0V2 99 aa1.05□□□□□ -2.24
NYV1YLR093C RPL43AP0CX25 92 aaKnown RBP1.05□□□□□ -2.24
NYV1YLR093C RPL43BP0CX26 92 aa1.05□□□□□ -2.24
NYV1YLR093C GCV3P39726 170 aaPredicted RBP1.05□□□□□ -2.24
NYV1YLR093C RPL37BP51402 88 aaKnown RBP1.05□□□□□ -2.24
NYV1YLR093C YDR029WQ12111 104 aa1.05□□□□□ -2.24
NYV1YLR093C YBL071CP38185 102 aa1.04□□□□□ -2.24
NYV1YLR093C YDR210WQ03482 75 aa1.04□□□□□ -2.24
NYV1YLR093C YCR075W-AQ3E830 75 aa1.04□□□□□ -2.24
NYV1YLR093C LAA1P39526 2014 aa1.03□□□□□ -2.24
NYV1YLR093C YHL005CP38752 130 aa1.03□□□□□ -2.24
NYV1YLR093C SKI3P17883 1432 aaKnown RBP1.03□□□□□ -2.24
NYV1YLR093C MRP17P28778 131 aa1.02□□□□□ -2.25
NYV1YLR093C SPC1P46965 94 aa1.02□□□□□ -2.25
NYV1YLR093C NHP10Q03435 203 aa1.02□□□□□ -2.25
NYV1YLR093C YRF1-6P53819 1859 aa1.01□□□□□ -2.25
NYV1YLR093C SHU1P38751 150 aa1.01□□□□□ -2.25
NYV1YLR093C COX12Q01519 83 aa1.01□□□□□ -2.25
NYV1YLR093C YNR034W-AQ3E841 98 aa1.01□□□□□ -2.25
NYV1YLR093C SRB8P25648 1427 aa1□□□□□ -2.25
NYV1YLR093C YLR157W-EP0CF00 54 aa1□□□□□ -2.25
NYV1YLR093C AUA1P32450 94 aa1□□□□□ -2.25
NYV1YLR093C YIL086CP40503 102 aa1□□□□□ -2.25
NYV1YLR093C MRX7P53869 86 aa1□□□□□ -2.25
NYV1YLR093C YGL194C-AQ2V2P6 80 aa1□□□□□ -2.25
NYV1YLR093C YLR307C-AQ3E825 87 aa1□□□□□ -2.25
NYV1YLR093C SUS1Q6WNK7 96 aa1□□□□□ -2.25
NYV1YLR093C URB1P34241 1764 aaKnown RBP1□□□□□ -2.25
NYV1YLR093C SEC7P11075 2009 aaKnown RBP0.99□□□□□ -2.25
NYV1YLR093C SEC16P48415 2195 aaKnown RBP0.99□□□□□ -2.25
NYV1YLR093C MRPL38P35996 138 aaPredicted RBP0.99□□□□□ -2.25
NYV1YLR093C MPC2P38857 129 aa0.99□□□□□ -2.25
NYV1YLR093C RSM18P40033 138 aa0.99□□□□□ -2.25
NYV1YLR093C YDR042CQ03205 200 aa0.99□□□□□ -2.25
NYV1YLR093C PAU20Q08322 120 aa0.99□□□□□ -2.25
NYV1YLR093C SCP1Q08873 200 aa0.99□□□□□ -2.25
NYV1YLR093C PAU1P0CE88 120 aa0.98□□□□□ -2.25
NYV1YLR093C PAU14P0CE89 120 aa0.98□□□□□ -2.25
NYV1YLR093C PAU8P0CE92 120 aa0.98□□□□□ -2.25
NYV1YLR093C PAU11P0CE93 120 aa0.98□□□□□ -2.25
NYV1YLR093C PAU13P38725 120 aa0.98□□□□□ -2.25
NYV1YLR093C YHR173CP38864 112 aa0.98□□□□□ -2.25
NYV1YLR093C PAU10Q03050 120 aa0.98□□□□□ -2.25
NYV1YLR093C ICY1Q04329 127 aa0.98□□□□□ -2.25
NYV1YLR093C PAU9Q3E770 120 aa0.98□□□□□ -2.25
NYV1YLR093C ECM12O13529 151 aa0.97□□□□□ -2.25
NYV1YLR093C SNU13P39990 126 aaKnown RBP0.97□□□□□ -2.25
NYV1YLR093C PAU4P53427 120 aa0.97□□□□□ -2.25
NYV1YLR093C MHF2Q3E829 80 aa0.97□□□□□ -2.25
NYV1YLR093C NHP2P32495 156 aaPredicted RBP0.96□□□□□ -2.26
NYV1YLR093C RPA190P10964 1664 aaKnown RBP0.96□□□□□ -2.26
NYV1YLR093C BNI1P41832 1953 aa0.96□□□□□ -2.26
NYV1YLR093C BPT1P14772 1559 aa0.96□□□□□ -2.26
NYV1YLR093C PDR10P51533 1564 aa0.96□□□□□ -2.26
NYV1YLR093C AIM19P40502 157 aa0.95□□□□□ -2.26
NYV1YLR093C YMR082CQ04276 118 aa0.95□□□□□ -2.26
NYV1YLR093C COX19Q3E731 98 aa0.95□□□□□ -2.26
NYV1YLR093C URA2P07259 2214 aaKnown RBP0.95□□□□□ -2.26
NYV1YLR093C RPS11AP0CX47 156 aaKnown RBP0.94□□□□□ -2.26
NYV1YLR093C RPS11BP0CX48 156 aaKnown RBP0.94□□□□□ -2.26
NYV1YLR093C YBR072C-AQ3E794 53 aa0.94□□□□□ -2.26
NYV1YLR093C SSN2P38931 1420 aa0.94□□□□□ -2.26
NYV1YLR093C MYO1P08964 1928 aa0.93□□□□□ -2.26
NYV1YLR093C BRR2P32639 2163 aaKnown RBP0.92□□□□□ -2.26
NYV1YLR093C GDB1Q06625 1536 aa0.92□□□□□ -2.26
NYV1YLR093C POL1P13382 1468 aa0.92□□□□□ -2.26
NYV1YLR093C YRF1-1P0CX20 1796 aa0.91□□□□□ -2.26
NYV1YLR093C YRF1-5P0CX21 1796 aa0.91□□□□□ -2.26
NYV1YLR093C YRF1-8P0CX22 1796 aa0.91□□□□□ -2.26
NYV1YLR093C SWR1Q05471 1514 aa0.91□□□□□ -2.26
NYV1YLR093C YBR292CP38357 123 aa0.91□□□□□ -2.26
NYV1YLR093C YOL164W-AQ3E7A5 60 aa0.91□□□□□ -2.26
NYV1YLR093C TY4B-HP0C2J7 1802 aa0.91□□□□□ -2.26
NYV1YLR093C CWP2P43497 92 aa0.9□□□□□ -2.27
NYV1YLR093C YDR010CQ12426 110 aa0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms