RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YAL064WP39711 94 aa1.63□□□□□ -2.15
SDC25YLL016W SED1Q01589 338 aa1.63□□□□□ -2.15
SDC25YLL016W INO4P13902 151 aa1.62□□□□□ -2.15
SDC25YLL016W YHR022CP38763 256 aa1.62□□□□□ -2.15
SDC25YLL016W YJL144WP47009 104 aa1.62□□□□□ -2.15
SDC25YLL016W SIP18P50263 79 aa1.62□□□□□ -2.15
SDC25YLL016W IRC19Q07843 230 aa1.62□□□□□ -2.15
SDC25YLL016W YHL042WP38729 150 aa1.62□□□□□ -2.15
SDC25YLL016W YHL018WP38744 120 aaPredicted RBP1.62□□□□□ -2.15
SDC25YLL016W YAR029WP39549 74 aa1.62□□□□□ -2.15
SDC25YLL016W MET31Q03081 177 aa1.62□□□□□ -2.15
SDC25YLL016W NMA1Q06178 401 aaKnown RBP1.62□□□□□ -2.15
SDC25YLL016W YPR153WQ06537 140 aa1.62□□□□□ -2.15
SDC25YLL016W YFR035CP43608 114 aa1.62□□□□□ -2.15
SDC25YLL016W YAE1P47118 141 aaPredicted RBP1.62□□□□□ -2.15
SDC25YLL016W FIT2Q08906 153 aa1.62□□□□□ -2.15
SDC25YLL016W YCL001W-BQ96VH2 84 aa1.62□□□□□ -2.15
SDC25YLL016W MRPL44P19956 98 aa1.61□□□□□ -2.15
SDC25YLL016W QCR10P37299 77 aa1.61□□□□□ -2.15
SDC25YLL016W ECM31P38122 312 aa1.61□□□□□ -2.15
SDC25YLL016W YPR096CO13587 100 aa1.61□□□□□ -2.15
SDC25YLL016W PAM16P42949 149 aa1.61□□□□□ -2.15
SDC25YLL016W BAT2P47176 376 aaKnown RBP1.61□□□□□ -2.15
SDC25YLL016W SOD1P00445 154 aaKnown RBP1.6□□□□□ -2.15
SDC25YLL016W SVP26P38869 228 aa1.6□□□□□ -2.15
SDC25YLL016W CCS1P40202 249 aaKnown RBP1.6□□□□□ -2.15
SDC25YLL016W EMC6Q12431 108 aa1.6□□□□□ -2.15
SDC25YLL016W YOR376W-AQ3E805 51 aa1.6□□□□□ -2.15
SDC25YLL016W FYV5P25585 152 aa1.6□□□□□ -2.15
SDC25YLL016W SPO73P40031 143 aa1.6□□□□□ -2.15
SDC25YLL016W YHR007C-AQ07074 71 aa1.6□□□□□ -2.15
SDC25YLL016W YMR030W-AQ3E760 96 aa1.6□□□□□ -2.15
SDC25YLL016W HYP2P23301 157 aaKnown RBP1.6□□□□□ -2.15
SDC25YLL016W SRL3P36167 246 aa1.6□□□□□ -2.15
SDC25YLL016W YEA6P39953 335 aa1.6□□□□□ -2.15
SDC25YLL016W POP3P53833 195 aaPredicted RBP1.6□□□□□ -2.15
SDC25YLL016W DAD4P69851 72 aa1.6□□□□□ -2.15
SDC25YLL016W MIX17Q03667 156 aa1.6□□□□□ -2.15
SDC25YLL016W SEC59P20048 519 aa1.59□□□□□ -2.15
SDC25YLL016W ELP6Q04868 273 aa1.59□□□□□ -2.15
SDC25YLL016W SML1Q04964 104 aa1.59□□□□□ -2.15
SDC25YLL016W RPS25BP0C0T4 108 aaKnown RBP1.59□□□□□ -2.16
SDC25YLL016W PAU21P0CE86 164 aa1.59□□□□□ -2.16
SDC25YLL016W PAU22P0CE87 164 aa1.59□□□□□ -2.16
SDC25YLL016W RPS25AQ3E792 108 aaPredicted RBP1.59□□□□□ -2.16
SDC25YLL016W YKL044WP36092 106 aa1.58□□□□□ -2.16
SDC25YLL016W YEL014CP39999 101 aa1.58□□□□□ -2.16
SDC25YLL016W BRP1P53194 125 aa1.58□□□□□ -2.16
SDC25YLL016W DAD3P69850 94 aa1.58□□□□□ -2.16
SDC25YLL016W YMR103CQ04436 120 aa1.58□□□□□ -2.16
SDC25YLL016W EMP24P32803 203 aaKnown RBP1.58□□□□□ -2.16
SDC25YLL016W GPI19Q04082 140 aa1.58□□□□□ -2.16
SDC25YLL016W DSE2P38844 325 aa1.57□□□□□ -2.16
SDC25YLL016W HPA3P39979 161 aa1.57□□□□□ -2.16
SDC25YLL016W ERV14P53173 138 aa1.57□□□□□ -2.16
SDC25YLL016W PRM7Q12459 698 aa1.57□□□□□ -2.16
SDC25YLL016W MED11Q99278 115 aa1.57□□□□□ -2.16
SDC25YLL016W YCL001W-AP87012 153 aa1.57□□□□□ -2.16
SDC25YLL016W YCL048W-AQ2V2Q2 79 aa1.57□□□□□ -2.16
SDC25YLL016W UTR5P32630 166 aa1.57□□□□□ -2.16
SDC25YLL016W NAT5Q08689 176 aa1.57□□□□□ -2.16
SDC25YLL016W FIT3Q08907 204 aa1.57□□□□□ -2.16
SDC25YLL016W RPL13AQ12690 199 aaPredicted RBP1.57□□□□□ -2.16
SDC25YLL016W IPT1P38954 527 aa1.56□□□□□ -2.16
SDC25YLL016W DCV1P43595 202 aa1.56□□□□□ -2.16
SDC25YLL016W GIS2P53849 153 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
SDC25YLL016W YMR090WQ04304 227 aaKnown RBP1.56□□□□□ -2.16
SDC25YLL016W FIT1Q04433 528 aa1.56□□□□□ -2.16
SDC25YLL016W AVO2Q04749 426 aa1.56□□□□□ -2.16
SDC25YLL016W YLR365WQ7LIF2 110 aa1.56□□□□□ -2.16
SDC25YLL016W SNF11P38956 169 aa1.56□□□□□ -2.16
SDC25YLL016W UBC4P15731 148 aa1.55□□□□□ -2.16
SDC25YLL016W CMC4Q3E7A9 73 aa1.55□□□□□ -2.16
SDC25YLL016W YJL197C-AP0C5P0 93 aa1.55□□□□□ -2.16
SDC25YLL016W TDA2P40045 126 aa1.55□□□□□ -2.16
SDC25YLL016W YER187WP40102 141 aa1.55□□□□□ -2.16
SDC25YLL016W GPI11Q06636 219 aa1.55□□□□□ -2.16
SDC25YLL016W YOS1Q3E834 85 aa1.55□□□□□ -2.16
SDC25YLL016W RPB7P34087 171 aa1.54□□□□□ -2.16
SDC25YLL016W YKR045CP36138 183 aa1.54□□□□□ -2.16
SDC25YLL016W HSP10P38910 106 aa1.54□□□□□ -2.16
SDC25YLL016W RTC6O14464 93 aa1.54□□□□□ -2.16
SDC25YLL016W MRPL11P36521 249 aaPredicted RBP1.54□□□□□ -2.16
SDC25YLL016W PEP8P40335 379 aa1.54□□□□□ -2.16
SDC25YLL016W YOR343CQ12484 108 aa1.54□□□□□ -2.16
SDC25YLL016W HUR1P45820 110 aa1.53□□□□□ -2.16
SDC25YLL016W FUN14P18411 198 aa1.53□□□□□ -2.16
SDC25YLL016W GTT1P40582 234 aa1.53□□□□□ -2.16
SDC25YLL016W YCR075W-AQ3E830 75 aa1.53□□□□□ -2.16
SDC25YLL016W YPL067CQ02754 198 aa1.53□□□□□ -2.17
SDC25YLL016W RPL39P04650 51 aa1.52□□□□□ -2.17
SDC25YLL016W AUA1P32450 94 aa1.52□□□□□ -2.17
SDC25YLL016W DAN1P47178 298 aa1.52□□□□□ -2.17
SDC25YLL016W YLR296WQ05898 108 aa1.52□□□□□ -2.17
SDC25YLL016W KSH1Q8TGJ3 72 aa1.52□□□□□ -2.17
SDC25YLL016W YBR242WP38331 238 aa1.52□□□□□ -2.17
SDC25YLL016W YPL261CQ08976 102 aa1.52□□□□□ -2.17
SDC25YLL016W YHR086W-AQ3E746 53 aa1.52□□□□□ -2.17
SDC25YLL016W PRE1P22141 198 aaKnown RBP1.51□□□□□ -2.17
SDC25YLL016W TIM12P32830 109 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms