RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	RPL20B	P0CX24	172 aa	Predicted RBP	4.19	□□□□□ -1.74
RRN3	YKL125W	MXR2	P25566	168 aa		4.19	□□□□□ -1.74
RRN3	YKL125W	UBC13	P52490	153 aa		4.19	□□□□□ -1.74
RRN3	YKL125W	SPT4	P32914	102 aa	Predicted RBP	4.18	□□□□□ -1.74
RRN3	YKL125W	RPL32	P38061	130 aa	Known RBP	4.18	□□□□□ -1.74
RRN3	YKL125W	YBR209W	P38311	105 aa		4.18	□□□□□ -1.74
RRN3	YKL125W	VHS2	P40463	436 aa		4.18	□□□□□ -1.74
RRN3	YKL125W	NCA3	P46955	337 aa		4.18	□□□□□ -1.74
RRN3	YKL125W	YHP1	Q04116	353 aa		4.18	□□□□□ -1.74
RRN3	YKL125W	RPL16A	P26784	199 aa	Known RBP	4.18	□□□□□ -1.74
RRN3	YKL125W	YGL034C	P53186	121 aa		4.18	□□□□□ -1.74
RRN3	YKL125W	FIT2	Q08906	153 aa		4.18	□□□□□ -1.74
RRN3	YKL125W	COX17	Q12287	69 aa		4.18	□□□□□ -1.74
RRN3	YKL125W	YOR376W-A	Q3E805	51 aa		4.18	□□□□□ -1.74
RRN3	YKL125W	AIM19	P40502	157 aa		4.17	□□□□□ -1.74
RRN3	YKL125W	YNL234W	P53857	426 aa		4.17	□□□□□ -1.74
RRN3	YKL125W	PBA1	Q05778	276 aa		4.17	□□□□□ -1.74
RRN3	YKL125W	NAG1	Q8TGN9	163 aa		4.17	□□□□□ -1.74
RRN3	YKL125W	BLM10	P43583	2143 aa		4.16	□□□□□ -1.74
RRN3	YKL125W	KEG1	P43614	200 aa		4.16	□□□□□ -1.74
RRN3	YKL125W	EAF6	P47128	113 aa		4.16	□□□□□ -1.74
RRN3	YKL125W	ICY1	Q04329	127 aa		4.16	□□□□□ -1.74
RRN3	YKL125W	HSP12	P22943	109 aa	Known RBP	4.15	□□□□□ -1.74
RRN3	YKL125W	AGA1	P32323	725 aa		4.15	□□□□□ -1.74
RRN3	YKL125W	MED6	P38782	295 aa		4.15	□□□□□ -1.74
RRN3	YKL125W	PGU1	P47180	361 aa		4.15	□□□□□ -1.74
RRN3	YKL125W	GLO1	P50107	326 aa		4.15	□□□□□ -1.74
RRN3	YKL125W	ATP23	P53722	227 aa		4.15	□□□□□ -1.74
RRN3	YKL125W	MGR2	Q02889	113 aa		4.15	□□□□□ -1.74
RRN3	YKL125W	GLT1	Q12680	2145 aa	Known RBP	4.15	□□□□□ -1.75
RRN3	YKL125W	FHN1	P53279	174 aa		4.15	□□□□□ -1.75
RRN3	YKL125W	PBP4	Q07362	185 aa	Known RBP	4.15	□□□□□ -1.75
RRN3	YKL125W	PPT2	Q12036	173 aa		4.15	□□□□□ -1.75
RRN3	YKL125W	COA3	Q3E7B2	85 aa		4.15	□□□□□ -1.75
RRN3	YKL125W	PEX17	P40155	199 aa		4.14	□□□□□ -1.75
RRN3	YKL125W	YML122C	Q03207	126 aa		4.14	□□□□□ -1.75
RRN3	YKL125W	YOR343C	Q12484	108 aa		4.14	□□□□□ -1.75
RRN3	YKL125W	HMRA2	P0CY13	119 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	RPB9	P27999	122 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	CTR2	P38865	189 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	ICS3	P47034	131 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	SPS100	P13130	326 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	AIM4	P38305	123 aa	Predicted RBP	4.13	□□□□□ -1.75
RRN3	YKL125W	MTC6	P38849	526 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	MPC2	P38857	129 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	ECO1	P43605	281 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	ERI1	P62651	68 aa	Known RBP	4.13	□□□□□ -1.75
RRN3	YKL125W	YMR181C	Q03231	154 aa		4.13	□□□□□ -1.75
RRN3	YKL125W	YHR214C-D	P0CX93	97 aa		4.12	□□□□□ -1.75
RRN3	YKL125W	YKR045C	P36138	183 aa		4.12	□□□□□ -1.75
RRN3	YKL125W	MIG3	P39943	394 aa		4.12	□□□□□ -1.75
RRN3	YKL125W	YFR035C	P43608	114 aa		4.12	□□□□□ -1.75
RRN3	YKL125W	RPC11	Q04307	110 aa	Predicted RBP	4.12	□□□□□ -1.75
RRN3	YKL125W	YLR194C	Q05777	254 aa		4.12	□□□□□ -1.75
RRN3	YKL125W	PRM7	Q12459	698 aa		4.12	□□□□□ -1.75
RRN3	YKL125W	MSA2	P36157	363 aa		4.11	□□□□□ -1.75
RRN3	YKL125W	YMR141C	P40211	102 aa		4.11	□□□□□ -1.75
RRN3	YKL125W	DAD4	P69851	72 aa		4.11	□□□□□ -1.75
RRN3	YKL125W	YDR274C	P87283	123 aa		4.11	□□□□□ -1.75
RRN3	YKL125W	LDB16	P25587	256 aa		4.11	□□□□□ -1.75
RRN3	YKL125W	SPI1	P40092	148 aa		4.11	□□□□□ -1.75
RRN3	YKL125W	YNL190W	P53872	204 aa		4.11	□□□□□ -1.75
RRN3	YKL125W	RPL15B	P54780	204 aa	Predicted RBP	4.11	□□□□□ -1.75
RRN3	YKL125W	YDL009C	Q12210	107 aa		4.11	□□□□□ -1.75
RRN3	YKL125W	HHF1	P02309	103 aa	Known RBP	4.1	□□□□□ -1.75
RRN3	YKL125W	RSM18	P40033	138 aa		4.1	□□□□□ -1.75
RRN3	YKL125W	YIL029C	P40538	142 aa		4.1	□□□□□ -1.75
RRN3	YKL125W	YLR111W	Q12528	110 aa		4.1	□□□□□ -1.75
RRN3	YKL125W	YLR285C-A	Q3E771	56 aa		4.1	□□□□□ -1.75
RRN3	YKL125W	ARF2	P19146	181 aa	Known RBP	4.09	□□□□□ -1.75
RRN3	YKL125W	YHR022C	P38763	256 aa		4.09	□□□□□ -1.75
RRN3	YKL125W	DCV1	P43595	202 aa		4.09	□□□□□ -1.75
RRN3	YKL125W	MRPS12	P53732	153 aa		4.09	□□□□□ -1.75
RRN3	YKL125W	YGL258W-A	Q3E740	77 aa		4.09	□□□□□ -1.75
RRN3	YKL125W	YAL065C	O13511	128 aa		4.09	□□□□□ -1.76
RRN3	YKL125W	EDC1	P53080	175 aa	Predicted RBP	4.09	□□□□□ -1.76
RRN3	YKL125W	YMR295C	Q03559	197 aa		4.09	□□□□□ -1.76
RRN3	YKL125W	VPS68	Q12016	184 aa		4.09	□□□□□ -1.76
RRN3	YKL125W	YHR214C-E	Q8TGK0	99 aa		4.09	□□□□□ -1.76
RRN3	YKL125W	RPL26A	P05743	127 aa	Known RBP	4.08	□□□□□ -1.76
RRN3	YKL125W	YLR156W	P0CE96	114 aa		4.08	□□□□□ -1.76
RRN3	YKL125W	YLR159W	P0CE97	114 aa		4.08	□□□□□ -1.76
RRN3	YKL125W	YLR161W	P0CE98	114 aa		4.08	□□□□□ -1.76
RRN3	YKL125W	YEL045C	P32616	141 aa		4.08	□□□□□ -1.76
RRN3	YKL125W	TOS6	P48560	102 aa		4.08	□□□□□ -1.76
RRN3	YKL125W	PCP1	P53259	346 aa		4.08	□□□□□ -1.76
RRN3	YKL125W	NCE101	Q02820	53 aa		4.08	□□□□□ -1.76
RRN3	YKL125W	YGR121W-A	Q3E816	71 aa		4.08	□□□□□ -1.76
RRN3	YKL125W	TOS8	P53147	276 aa		4.07	□□□□□ -1.76
RRN3	YKL125W	YLR162W	Q06235	118 aa		4.07	□□□□□ -1.76
RRN3	YKL125W	ATP20	Q12233	115 aa		4.07	□□□□□ -1.76
RRN3	YKL125W	YOR381W-A	Q3E804	55 aa		4.07	□□□□□ -1.76
RRN3	YKL125W	IMP2	P46972	177 aa		4.07	□□□□□ -1.76
RRN3	YKL125W	YOL160W	Q08321	113 aa		4.07	□□□□□ -1.76
RRN3	YKL125W	YOR314W	Q12506	109 aa		4.07	□□□□□ -1.76
RRN3	YKL125W	YER175W-A	Q8TGU4	54 aa		4.07	□□□□□ -1.76
RRN3	YKL125W	YBR144C	P34215	104 aa		4.06	□□□□□ -1.76
RRN3	YKL125W	HUR1	P45820	110 aa		4.06	□□□□□ -1.76
RRN3	YKL125W	YML100W-A	Q8TGT0	57 aa		4.06	□□□□□ -1.76
RRN3	YKL125W	MDM35	O60200	86 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms