RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W RPS22AP0C0W1 130 aaKnown RBP2.58□□□□□ -2
TFA1YKL028W ROX3P25046 220 aa2.58□□□□□ -2
TFA1YKL028W YPR203WQ08994 102 aa2.58□□□□□ -2
TFA1YKL028W TY1B-BRQ12193 1756 aa2.57□□□□□ -2
TFA1YKL028W IMP2P46972 177 aa2.56□□□□□ -2
TFA1YKL028W ICY1Q04329 127 aa2.56□□□□□ -2
TFA1YKL028W IRC21Q04772 201 aa2.56□□□□□ -2
TFA1YKL028W YCR095W-AQ3E787 52 aa2.56□□□□□ -2
TFA1YKL028W ENV10Q99382 181 aa2.56□□□□□ -2
TFA1YKL028W ACC1Q00955 2233 aaKnown RBP2.56□□□□□ -2
TFA1YKL028W YCL048W-AQ2V2Q2 79 aa2.55□□□□□ -2
TFA1YKL028W YPK9Q12697 1472 aa2.54□□□□□ -2
TFA1YKL028W GDB1Q06625 1536 aa2.54□□□□□ -2
TFA1YKL028W YCR085WP25650 117 aa2.53□□□□□ -2
TFA1YKL028W VPS55P47111 140 aa2.53□□□□□ -2
TFA1YKL028W CCW12Q12127 133 aa2.53□□□□□ -2
TFA1YKL028W YMR175W-AQ3E766 64 aa2.53□□□□□ -2
TFA1YKL028W SNA2P56508 79 aa2.52□□□□□ -2.01
TFA1YKL028W YOL118CQ08259 102 aa2.52□□□□□ -2.01
TFA1YKL028W YHL037CP38733 133 aa2.51□□□□□ -2.01
TFA1YKL028W YGL041C-BQ3E750 60 aa2.51□□□□□ -2.01
TFA1YKL028W RPS22BQ3E7Y3 130 aaKnown RBP2.51□□□□□ -2.01
TFA1YKL028W MHF2Q3E829 80 aa2.51□□□□□ -2.01
TFA1YKL028W BPT1P14772 1559 aa2.51□□□□□ -2.01
TFA1YKL028W YRF1-2P40105 1681 aa2.51□□□□□ -2.01
TFA1YKL028W TY4B-JP47024 1803 aa2.51□□□□□ -2.01
TFA1YKL028W SLH1P53327 1967 aaKnown RBP2.51□□□□□ -2.01
TFA1YKL028W TY1B-NL2Q99337 1749 aaKnown RBP2.51□□□□□ -2.01
TFA1YKL028W ICS3P47034 131 aa2.51□□□□□ -2.01
TFA1YKL028W POC4Q12245 148 aaPredicted RBP2.51□□□□□ -2.01
TFA1YKL028W RPA12P32529 125 aaKnown RBP2.5□□□□□ -2.01
TFA1YKL028W LSM2P38203 95 aaKnown RBP2.5□□□□□ -2.01
TFA1YKL028W MLP1Q02455 1875 aaKnown RBP2.49□□□□□ -2.01
TFA1YKL028W MIC27P50945 234 aa2.49□□□□□ -2.01
TFA1YKL028W MRP17P28778 131 aa2.48□□□□□ -2.01
TFA1YKL028W NHP2P32495 156 aaPredicted RBP2.48□□□□□ -2.01
TFA1YKL028W YBR013CP38215 129 aa2.48□□□□□ -2.01
TFA1YKL028W YHR213W-AQ8TGT4 77 aa2.48□□□□□ -2.01
TFA1YKL028W POL1P13382 1468 aa2.47□□□□□ -2.01
TFA1YKL028W CCW14O13547 238 aa2.47□□□□□ -2.01
TFA1YKL028W PAU6P0CE90 120 aa2.47□□□□□ -2.01
TFA1YKL028W PAU18P0CE91 120 aa2.47□□□□□ -2.01
TFA1YKL028W SPC1P46965 94 aa2.47□□□□□ -2.01
TFA1YKL028W YJL009WP47078 108 aa2.47□□□□□ -2.01
TFA1YKL028W LCL2Q08045 131 aa2.47□□□□□ -2.01
TFA1YKL028W ESP1Q03018 1630 aa2.46□□□□□ -2.01
TFA1YKL028W AQY2P0CD90 149 aa2.46□□□□□ -2.02
TFA1YKL028W YHR212W-AP0CX91 67 aa2.46□□□□□ -2.02
TFA1YKL028W MRPL38P35996 138 aaPredicted RBP2.46□□□□□ -2.02
TFA1YKL028W YBL071CP38185 102 aa2.46□□□□□ -2.02
TFA1YKL028W MRPS12P53732 153 aa2.46□□□□□ -2.02
TFA1YKL028W YNL122CP53921 115 aaPredicted RBP2.46□□□□□ -2.02
TFA1YKL028W YGR240C-AQ3E786 66 aa2.46□□□□□ -2.02
TFA1YKL028W TOM6P33448 61 aa2.44□□□□□ -2.02
TFA1YKL028W YPL038W-AQ3E7B4 63 aa2.44□□□□□ -2.02
TFA1YKL028W SRB8P25648 1427 aa2.43□□□□□ -2.02
TFA1YKL028W TY1B-DR1Q03855 1755 aa2.42□□□□□ -2.02
TFA1YKL028W TY1B-DR3Q99231 1755 aa2.42□□□□□ -2.02
TFA1YKL028W MRPL31P14063 131 aaPredicted RBP2.42□□□□□ -2.02
TFA1YKL028W YDR210WQ03482 75 aa2.42□□□□□ -2.02
TFA1YKL028W MRX7P53869 86 aa2.41□□□□□ -2.02
TFA1YKL028W NUP159P40477 1460 aa2.41□□□□□ -2.02
TFA1YKL028W YAR064WP39563 99 aa2.4□□□□□ -2.03
TFA1YKL028W YOR072WQ08486 104 aa2.4□□□□□ -2.03
TFA1YKL028W YOR343CQ12484 108 aa2.4□□□□□ -2.03
TFA1YKL028W BRR2P32639 2163 aaKnown RBP2.39□□□□□ -2.03
TFA1YKL028W PAI3P01094 68 aa2.39□□□□□ -2.03
TFA1YKL028W COX12Q01519 83 aa2.39□□□□□ -2.03
TFA1YKL028W YPR145C-AQ2V2P0 78 aa2.39□□□□□ -2.03
TFA1YKL028W YNR034W-AQ3E841 98 aa2.39□□□□□ -2.03
TFA1YKL028W YRF1-1P0CX20 1796 aa2.38□□□□□ -2.03
TFA1YKL028W YRF1-5P0CX21 1796 aa2.38□□□□□ -2.03
TFA1YKL028W YRF1-8P0CX22 1796 aa2.38□□□□□ -2.03
TFA1YKL028W YCR001WP25347 104 aa2.38□□□□□ -2.03
TFA1YKL028W YDR381C-AQ3E6R5 114 aa2.38□□□□□ -2.03
TFA1YKL028W NTE1Q04958 1679 aa2.38□□□□□ -2.03
TFA1YKL028W YOL013W-AP0C272 63 aaPredicted RBP2.37□□□□□ -2.03
TFA1YKL028W PAU1P0CE88 120 aa2.37□□□□□ -2.03
TFA1YKL028W PAU14P0CE89 120 aa2.37□□□□□ -2.03
TFA1YKL028W PAU8P0CE92 120 aa2.37□□□□□ -2.03
TFA1YKL028W PAU11P0CE93 120 aa2.37□□□□□ -2.03
TFA1YKL028W YHR214C-DP0CX93 97 aa2.37□□□□□ -2.03
TFA1YKL028W PAU13P38725 120 aa2.37□□□□□ -2.03
TFA1YKL028W AIM19P40502 157 aa2.37□□□□□ -2.03
TFA1YKL028W PAU4P53427 120 aa2.37□□□□□ -2.03
TFA1YKL028W PAU10Q03050 120 aa2.37□□□□□ -2.03
TFA1YKL028W YDR119W-AQ2V2P9 66 aa2.37□□□□□ -2.03
TFA1YKL028W PAU9Q3E770 120 aa2.37□□□□□ -2.03
TFA1YKL028W MMS22Q06164 1454 aa2.37□□□□□ -2.03
TFA1YKL028W URB1P34241 1764 aaKnown RBP2.36□□□□□ -2.03
TFA1YKL028W BSC4P53841 131 aa2.35□□□□□ -2.03
TFA1YKL028W MGR2Q02889 113 aa2.35□□□□□ -2.03
TFA1YKL028W HFA1P32874 2273 aa2.35□□□□□ -2.03
TFA1YKL028W MVB12P42939 101 aa2.34□□□□□ -2.03
TFA1YKL028W PAU20Q08322 120 aa2.34□□□□□ -2.03
TFA1YKL028W SIN3P22579 1536 aa2.34□□□□□ -2.03
TFA1YKL028W YLR255CO13574 117 aa2.34□□□□□ -2.04
TFA1YKL028W LCL1Q02786 101 aa2.34□□□□□ -2.04
TFA1YKL028W RPS11AP0CX47 156 aaKnown RBP2.33□□□□□ -2.04
TFA1YKL028W RPS11BP0CX48 156 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms