RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W YBR209WP38311 105 aa8.32□□□□□ -1.08
TCD2YKL027W YIL059CP40520 121 aa8.32□□□□□ -1.08
TCD2YKL027W YJL028WP47062 111 aa8.32□□□□□ -1.08
TCD2YKL027W YPR010C-AA5Z2X5 72 aa8.31□□□□□ -1.08
TCD2YKL027W HMRA2P0CY13 119 aa8.31□□□□□ -1.08
TCD2YKL027W SEN15Q04675 128 aa8.31□□□□□ -1.08
TCD2YKL027W YIL134C-AQ45U18 67 aa8.31□□□□□ -1.08
TCD2YKL027W PAU16P35994 123 aa8.3□□□□□ -1.08
TCD2YKL027W AIM29P36154 155 aa8.3□□□□□ -1.08
TCD2YKL027W CNL1Q06333 122 aa8.3□□□□□ -1.08
TCD2YKL027W MDN1Q12019 4910 aaKnown RBP8.3□□□□□ -1.08
TCD2YKL027W RPL33AP05744 107 aaKnown RBP8.29□□□□□ -1.08
TCD2YKL027W RPL33BP41056 107 aaKnown RBP8.29□□□□□ -1.08
TCD2YKL027W YGL088WP53151 121 aa8.29□□□□□ -1.08
TCD2YKL027W SAP30P38429 201 aa8.29□□□□□ -1.08
TCD2YKL027W PBA1Q05778 276 aa8.29□□□□□ -1.08
TCD2YKL027W YLR112WQ12130 139 aa8.29□□□□□ -1.08
TCD2YKL027W COA3Q3E7B2 85 aa8.29□□□□□ -1.08
TCD2YKL027W YLL066W-BQ8TGJ7 56 aa8.28□□□□□ -1.08
TCD2YKL027W RTC6O14464 93 aa8.27□□□□□ -1.09
TCD2YKL027W APS1P35181 156 aa8.27□□□□□ -1.09
TCD2YKL027W ERG28P40030 148 aa8.27□□□□□ -1.09
TCD2YKL027W YMR103CQ04436 120 aa8.27□□□□□ -1.09
TCD2YKL027W YLR050CQ12155 161 aaKnown RBP8.27□□□□□ -1.09
TCD2YKL027W YCL021W-AQ96VH3 125 aa8.27□□□□□ -1.09
TCD2YKL027W FYV4P38783 130 aaPredicted RBP8.26□□□□□ -1.09
TCD2YKL027W YEL008WP40001 126 aa8.26□□□□□ -1.09
TCD2YKL027W YAR029WP39549 74 aa8.25□□□□□ -1.09
TCD2YKL027W RPL31AP0C2H8 113 aaKnown RBP8.24□□□□□ -1.09
TCD2YKL027W YMR320WQ04897 101 aa8.23□□□□□ -1.09
TCD2YKL027W RPL11AP0C0W9 174 aaKnown RBP8.22□□□□□ -1.09
TCD2YKL027W YKL070WP36087 169 aa8.22□□□□□ -1.09
TCD2YKL027W YER085CP40058 173 aa8.22□□□□□ -1.09
TCD2YKL027W RPL11BQ3E757 174 aaPredicted RBP8.22□□□□□ -1.09
TCD2YKL027W SVP26P38869 228 aa8.21□□□□□ -1.1
TCD2YKL027W YDR115WQ04598 105 aa8.21□□□□□ -1.1
TCD2YKL027W TPT1Q12272 230 aaKnown RBP8.21□□□□□ -1.1
TCD2YKL027W ENV10Q99382 181 aa8.21□□□□□ -1.1
TCD2YKL027W DIF1O13577 133 aa8.2□□□□□ -1.1
TCD2YKL027W HAC1P41546 238 aa8.19□□□□□ -1.1
TCD2YKL027W VTS1Q08831 523 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
TCD2YKL027W ATP15P21306 62 aa8.18□□□□□ -1.1
TCD2YKL027W DFM1Q12743 341 aaKnown RBP8.18□□□□□ -1.1
TCD2YKL027W SEC11P15367 167 aa8.17□□□□□ -1.1
TCD2YKL027W CGR1P53188 120 aa8.17□□□□□ -1.1
TCD2YKL027W YLR194CQ05777 254 aa8.17□□□□□ -1.1
TCD2YKL027W YBR219CP38317 127 aa8.16□□□□□ -1.1
TCD2YKL027W RPC10P40422 70 aa8.15□□□□□ -1.1
TCD2YKL027W LSM8P47093 109 aaKnown RBP8.15□□□□□ -1.1
TCD2YKL027W SCS22Q6Q595 175 aa8.15□□□□□ -1.1
TCD2YKL027W YGL230CP53074 147 aa8.14□□□□□ -1.11
TCD2YKL027W AIM11P87275 137 aa8.14□□□□□ -1.11
TCD2YKL027W YMR295CQ03559 197 aa8.14□□□□□ -1.11
TCD2YKL027W BET5Q03630 159 aa8.14□□□□□ -1.11
TCD2YKL027W RRT15Q3E811 62 aa8.14□□□□□ -1.11
TCD2YKL027W FUN14P18411 198 aa8.13□□□□□ -1.11
TCD2YKL027W YKL044WP36092 106 aa8.13□□□□□ -1.11
TCD2YKL027W YPR195CQ06594 109 aa8.13□□□□□ -1.11
TCD2YKL027W YPL261CQ08976 102 aa8.13□□□□□ -1.11
TCD2YKL027W FYV7Q12247 151 aa8.13□□□□□ -1.11
TCD2YKL027W YMR175W-AQ3E766 64 aa8.13□□□□□ -1.11
TCD2YKL027W MSL1P40567 111 aaPredicted RBP8.12□□□□□ -1.11
TCD2YKL027W RPL32P38061 130 aaKnown RBP8.11□□□□□ -1.11
TCD2YKL027W MRPL44P19956 98 aa8.1□□□□□ -1.11
TCD2YKL027W SHU1P38751 150 aa8.1□□□□□ -1.11
TCD2YKL027W YAR023CD6VPM8 179 aa8.09□□□□□ -1.11
TCD2YKL027W YCR007CP25354 239 aa8.09□□□□□ -1.11
TCD2YKL027W PEX17P40155 199 aa8.09□□□□□ -1.11
TCD2YKL027W YDL157CQ12082 118 aa8.09□□□□□ -1.11
TCD2YKL027W ANB1P19211 157 aa8.08□□□□□ -1.12
TCD2YKL027W YKR041WP36134 250 aa8.08□□□□□ -1.12
TCD2YKL027W YAL064WP39711 94 aa8.08□□□□□ -1.12
TCD2YKL027W PPT2Q12036 173 aa8.08□□□□□ -1.12
TCD2YKL027W YDL022C-AP0C5L6 82 aa8.07□□□□□ -1.12
TCD2YKL027W YPL073CP40323 161 aa8.06□□□□□ -1.12
TCD2YKL027W NAT5Q08689 176 aa8.06□□□□□ -1.12
TCD2YKL027W RPL18AP0CX49 186 aaKnown RBP8.05□□□□□ -1.12
TCD2YKL027W RPL18BP0CX50 186 aaKnown RBP8.05□□□□□ -1.12
TCD2YKL027W YBL081WP38180 368 aaKnown RBP8.05□□□□□ -1.12
TCD2YKL027W COX14P39103 70 aa8.05□□□□□ -1.12
TCD2YKL027W YDL241WQ07738 123 aa8.05□□□□□ -1.12
TCD2YKL027W YAL065CO13511 128 aa8.04□□□□□ -1.12
TCD2YKL027W ATP5P09457 212 aa8.04□□□□□ -1.12
TCD2YKL027W CIN5P40917 295 aa8.04□□□□□ -1.12
TCD2YKL027W YPL229WQ99395 206 aa8.04□□□□□ -1.12
TCD2YKL027W QCR8P08525 94 aa8.03□□□□□ -1.12
TCD2YKL027W TOA2P32774 122 aa8.03□□□□□ -1.12
TCD2YKL027W SCM4P32564 187 aa8.02□□□□□ -1.13
TCD2YKL027W VTC1P40046 129 aaRIP-Chip data8.02□□□□□ -1.13not detected
TCD2YKL027W IGO2Q9P305 131 aa8.02□□□□□ -1.13
TCD2YKL027W ADH1P00330 348 aaKnown RBP8.01□□□□□ -1.13
TCD2YKL027W MRP10O75012 95 aa8□□□□□ -1.13
TCD2YKL027W HAP3P13434 144 aa8□□□□□ -1.13
TCD2YKL027W GAT4P40569 121 aa8□□□□□ -1.13
TCD2YKL027W MRPS12P53732 153 aa8□□□□□ -1.13
TCD2YKL027W YDR034C-AP0C289 58 aa7.99□□□□□ -1.13
TCD2YKL027W RPF1P38805 295 aaKnown RBP7.99□□□□□ -1.13
TCD2YKL027W YEL067CP39978 195 aa7.99□□□□□ -1.13
TCD2YKL027W SNA2P56508 79 aa7.99□□□□□ -1.13
TCD2YKL027W YDL085C-AQ3E7B7 68 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms