RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C SCW10Q04951 389 aa3.78□□□□□ -1.8
PAN1YIR006C YOR097CQ12274 175 aaPredicted RBP3.78□□□□□ -1.8
PAN1YIR006C TDA2P40045 126 aa3.77□□□□□ -1.81
PAN1YIR006C NUP42P49686 430 aaKnown RBP3.77□□□□□ -1.81
PAN1YIR006C PFY1P07274 126 aa3.77□□□□□ -1.81
PAN1YIR006C YHR022CP38763 256 aa3.77□□□□□ -1.81
PAN1YIR006C KNH1P50112 268 aa3.77□□□□□ -1.81
PAN1YIR006C MBF1O14467 151 aaKnown RBP3.77□□□□□ -1.81
PAN1YIR006C TOA2P32774 122 aa3.77□□□□□ -1.81
PAN1YIR006C YER135CP40082 130 aa3.77□□□□□ -1.81
PAN1YIR006C YNL198CP40166 100 aa3.77□□□□□ -1.81
PAN1YIR006C AIM19P40502 157 aa3.77□□□□□ -1.81
PAN1YIR006C CYC7P00045 113 aa3.76□□□□□ -1.81
PAN1YIR006C GLE2P40066 365 aa3.76□□□□□ -1.81
PAN1YIR006C RDL1Q12305 139 aaKnown RBP3.76□□□□□ -1.81
PAN1YIR006C DUT1P33317 147 aa3.76□□□□□ -1.81
PAN1YIR006C YOL160WQ08321 113 aa3.76□□□□□ -1.81
PAN1YIR006C QCR8P08525 94 aa3.75□□□□□ -1.81
PAN1YIR006C API2Q04413 109 aa3.75□□□□□ -1.81
PAN1YIR006C CCW14O13547 238 aa3.75□□□□□ -1.81
PAN1YIR006C NRG2P38082 220 aa3.75□□□□□ -1.81
PAN1YIR006C YJL118WP47022 219 aa3.75□□□□□ -1.81
PAN1YIR006C AQY1P0CD91 305 aa3.75□□□□□ -1.81
PAN1YIR006C DFM1Q12743 341 aaKnown RBP3.75□□□□□ -1.81
PAN1YIR006C RPL16BP26785 198 aaKnown RBP3.74□□□□□ -1.81
PAN1YIR006C MRPL24P36525 258 aaPredicted RBP3.74□□□□□ -1.81
PAN1YIR006C KRE1P17260 313 aa3.74□□□□□ -1.81
PAN1YIR006C COX10P21592 462 aa3.74□□□□□ -1.81
PAN1YIR006C SPG4Q04438 115 aa3.74□□□□□ -1.81
PAN1YIR006C CCH1P50077 2039 aa3.74□□□□□ -1.81
PAN1YIR006C YHR213WP0CI67 198 aa3.74□□□□□ -1.81
PAN1YIR006C YOR029WQ12243 111 aa3.74□□□□□ -1.81
PAN1YIR006C YIL046W-AQ3E7Z4 54 aa3.74□□□□□ -1.81
PAN1YIR006C ENV10Q99382 181 aa3.74□□□□□ -1.81
PAN1YIR006C YHR139C-AO13536 103 aa3.73□□□□□ -1.81
PAN1YIR006C SPC1P46965 94 aa3.73□□□□□ -1.81
PAN1YIR006C TOS6P48560 102 aa3.73□□□□□ -1.81
PAN1YIR006C HOR7Q05827 59 aa3.73□□□□□ -1.81
PAN1YIR006C IRC21Q04772 201 aa3.73□□□□□ -1.81
PAN1YIR006C YPL278CQ08990 100 aa3.73□□□□□ -1.81
PAN1YIR006C YOL085CQ99345 113 aa3.73□□□□□ -1.81
PAN1YIR006C YHL042WP38729 150 aa3.73□□□□□ -1.81
PAN1YIR006C YNL184CP53876 108 aa3.73□□□□□ -1.81
PAN1YIR006C YPL080CQ02826 108 aa3.73□□□□□ -1.81
PAN1YIR006C RPL2AP0CX45 254 aaKnown RBP3.73□□□□□ -1.81
PAN1YIR006C RPL2BP0CX46 254 aaKnown RBP3.73□□□□□ -1.81
PAN1YIR006C YKR032WP36127 104 aa3.73□□□□□ -1.81
PAN1YIR006C IMP2P46972 177 aa3.73□□□□□ -1.81
PAN1YIR006C STF1P01098 86 aa3.72□□□□□ -1.81
PAN1YIR006C YRA2P36036 203 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PAN1YIR006C ERI1P62651 68 aaKnown RBP3.72□□□□□ -1.81
PAN1YIR006C MIX17Q03667 156 aa3.72□□□□□ -1.81
PAN1YIR006C YIL102CP40488 101 aa3.72□□□□□ -1.81
PAN1YIR006C BRP1P53194 125 aa3.72□□□□□ -1.81
PAN1YIR006C YNL234WP53857 426 aa3.72□□□□□ -1.81
PAN1YIR006C GLT1Q12680 2145 aaKnown RBP3.72□□□□□ -1.81
PAN1YIR006C SKI6P46948 246 aaPredicted RBP3.72□□□□□ -1.81
PAN1YIR006C Q0032Q9ZZX7 96 aa3.72□□□□□ -1.81
PAN1YIR006C AGA1P32323 725 aa3.71□□□□□ -1.81
PAN1YIR006C PET8P38921 284 aa3.71□□□□□ -1.82
PAN1YIR006C ARC15P40518 154 aaRIP-Chip data3.71□□□□□ -1.82not detected
PAN1YIR006C CCW12Q12127 133 aa3.71□□□□□ -1.82
PAN1YIR006C UTP20P35194 2493 aaKnown RBP3.71□□□□□ -1.82
PAN1YIR006C GAT3Q07928 141 aa3.71□□□□□ -1.82
PAN1YIR006C YIR020CP40575 100 aa3.7□□□□□ -1.82
PAN1YIR006C YNL190WP53872 204 aa3.7□□□□□ -1.82
PAN1YIR006C CRC1Q12289 327 aa3.7□□□□□ -1.82
PAN1YIR006C YBL112CQ3E7Y4 105 aa3.7□□□□□ -1.82
PAN1YIR006C MEC1P38111 2368 aa3.7□□□□□ -1.82
PAN1YIR006C RPS8AP0CX39 200 aaKnown RBP3.7□□□□□ -1.82
PAN1YIR006C RPS8BP0CX40 200 aaKnown RBP3.7□□□□□ -1.82
PAN1YIR006C YCR001WP25347 104 aa3.7□□□□□ -1.82
PAN1YIR006C YCR041WP37265 110 aa3.7□□□□□ -1.82
PAN1YIR006C LCB3P47013 409 aa3.7□□□□□ -1.82
PAN1YIR006C ECM12O13529 151 aa3.7□□□□□ -1.82
PAN1YIR006C RPS11AP0CX47 156 aaKnown RBP3.7□□□□□ -1.82
PAN1YIR006C RPS11BP0CX48 156 aaKnown RBP3.7□□□□□ -1.82
PAN1YIR006C YCL042WP25572 119 aa3.7□□□□□ -1.82
PAN1YIR006C YKL023C-AQ2V2P3 75 aa3.7□□□□□ -1.82
PAN1YIR006C YLR285C-AQ3E771 56 aa3.7□□□□□ -1.82
PAN1YIR006C YLR296WQ05898 108 aa3.69□□□□□ -1.82
PAN1YIR006C FMP27Q06179 2628 aa3.69□□□□□ -1.82
PAN1YIR006C YCH1P42937 148 aa3.69□□□□□ -1.82
PAN1YIR006C YGR035W-AQ45U48 73 aa3.69□□□□□ -1.82
PAN1YIR006C YAR029WP39549 74 aa3.69□□□□□ -1.82
PAN1YIR006C SNA2P56508 79 aa3.69□□□□□ -1.82
PAN1YIR006C YPR010C-AA5Z2X5 72 aa3.69□□□□□ -1.82
PAN1YIR006C MSA1Q08471 629 aa3.69□□□□□ -1.82
PAN1YIR006C YBR200W-AQ3E755 54 aa3.69□□□□□ -1.82
PAN1YIR006C YJR107C-AP0CT86 78 aa3.68□□□□□ -1.82
PAN1YIR006C ATG33Q06485 197 aa3.68□□□□□ -1.82
PAN1YIR006C TOM1Q03280 3268 aa3.68□□□□□ -1.82
PAN1YIR006C YLR281CQ05863 155 aa3.68□□□□□ -1.82
PAN1YIR006C YFL041W-AQ3E817 63 aa3.68□□□□□ -1.82
PAN1YIR006C CYR1P08678 2026 aaKnown RBP3.68□□□□□ -1.82
PAN1YIR006C COA3Q3E7B2 85 aa3.68□□□□□ -1.82
PAN1YIR006C YAR023CD6VPM8 179 aa3.67□□□□□ -1.82
PAN1YIR006C VMA11P32842 164 aa3.67□□□□□ -1.82
PAN1YIR006C YBR144CP34215 104 aa3.67□□□□□ -1.82
PAN1YIR006C MIG3P39943 394 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms