RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W RPL16AP26784 199 aaKnown RBP8.37□□□□□ -1.07
SIM1YIL123W CWC27Q02770 301 aa8.37□□□□□ -1.07
SIM1YIL123W YPL073CP40323 161 aa8.36□□□□□ -1.07
SIM1YIL123W UIP3P39547 235 aa8.35□□□□□ -1.07
SIM1YIL123W YPS5P53057 165 aa8.35□□□□□ -1.07
SIM1YIL123W YPL261CQ08976 102 aa8.35□□□□□ -1.07
SIM1YIL123W TRP1P00912 224 aa8.34□□□□□ -1.07
SIM1YIL123W MLF3P32047 452 aa8.34□□□□□ -1.07
SIM1YIL123W YNL217WP40152 326 aa8.34□□□□□ -1.07
SIM1YIL123W COX12Q01519 83 aa8.34□□□□□ -1.07
SIM1YIL123W DFM1Q12743 341 aaKnown RBP8.34□□□□□ -1.07
SIM1YIL123W YLR363W-AQ3E747 85 aa8.34□□□□□ -1.07
SIM1YIL123W YBR126W-AQ8TGU7 68 aa8.34□□□□□ -1.07
SIM1YIL123W YCR075W-AQ3E830 75 aa8.33□□□□□ -1.08
SIM1YIL123W YML079WQ03629 201 aa8.32□□□□□ -1.08
SIM1YIL123W YDL022C-AP0C5L6 82 aa8.31□□□□□ -1.08
SIM1YIL123W RPL32P38061 130 aaKnown RBP8.31□□□□□ -1.08
SIM1YIL123W KRE9P39005 276 aa8.31□□□□□ -1.08
SIM1YIL123W AIM11P87275 137 aa8.31□□□□□ -1.08
SIM1YIL123W PMP3P87284 55 aa8.31□□□□□ -1.08
SIM1YIL123W ADH2P00331 348 aaKnown RBP8.3□□□□□ -1.08
SIM1YIL123W UBC5P15732 148 aa8.3□□□□□ -1.08
SIM1YIL123W MRP49P32388 137 aa8.3□□□□□ -1.08
SIM1YIL123W YKR041WP36134 250 aa8.29□□□□□ -1.08
SIM1YIL123W RPS8AP0CX39 200 aaKnown RBP8.29□□□□□ -1.08
SIM1YIL123W RPS8BP0CX40 200 aaKnown RBP8.29□□□□□ -1.08
SIM1YIL123W ATP15P21306 62 aa8.29□□□□□ -1.08
SIM1YIL123W RPF1P38805 295 aaKnown RBP8.29□□□□□ -1.08
SIM1YIL123W YGR240C-AQ3E786 66 aa8.29□□□□□ -1.08
SIM1YIL123W AIM29P36154 155 aa8.28□□□□□ -1.08
SIM1YIL123W YEL067CP39978 195 aa8.28□□□□□ -1.08
SIM1YIL123W YPR170W-BP0C5R9 85 aa8.27□□□□□ -1.09
SIM1YIL123W YBR209WP38311 105 aa8.27□□□□□ -1.09
SIM1YIL123W YCR001WP25347 104 aa8.26□□□□□ -1.09
SIM1YIL123W VAM10Q08474 114 aa8.26□□□□□ -1.09
SIM1YIL123W UTP20P35194 2493 aaKnown RBP8.26□□□□□ -1.09
SIM1YIL123W MBF1O14467 151 aaKnown RBP8.25□□□□□ -1.09
SIM1YIL123W YEL008WP40001 126 aa8.25□□□□□ -1.09
SIM1YIL123W YGL088WP53151 121 aa8.25□□□□□ -1.09
SIM1YIL123W YNR077CP53758 84 aa8.25□□□□□ -1.09
SIM1YIL123W SCW10Q04951 389 aa8.25□□□□□ -1.09
SIM1YIL123W YLR281CQ05863 155 aa8.25□□□□□ -1.09
SIM1YIL123W IGO2Q9P305 131 aa8.25□□□□□ -1.09
SIM1YIL123W YPT53P36019 220 aa8.24□□□□□ -1.09
SIM1YIL123W YIL059CP40520 121 aa8.24□□□□□ -1.09
SIM1YIL123W ELC1Q03071 99 aa8.24□□□□□ -1.09
SIM1YIL123W YLR194CQ05777 254 aa8.23□□□□□ -1.09
SIM1YIL123W YCL021W-AQ96VH3 125 aa8.23□□□□□ -1.09
SIM1YIL123W ARC15P40518 154 aaRIP-Chip data8.22□□□□□ -1.09not detected
SIM1YIL123W NRG2P38082 220 aa8.21□□□□□ -1.09
SIM1YIL123W PEX17P40155 199 aa8.21□□□□□ -1.09
SIM1YIL123W YKL023C-AQ2V2P3 75 aa8.21□□□□□ -1.09
SIM1YIL123W YMR122W-AQ3E842 84 aa8.21□□□□□ -1.09
SIM1YIL123W OXA1P39952 402 aa8.2□□□□□ -1.1
SIM1YIL123W CIN5P40917 295 aa8.2□□□□□ -1.1
SIM1YIL123W SGF11Q03067 99 aa8.2□□□□□ -1.1
SIM1YIL123W YLR296WQ05898 108 aa8.2□□□□□ -1.1
SIM1YIL123W AIR2Q12476 344 aaKnown RBP8.2□□□□□ -1.1
SIM1YIL123W ERI1P62651 68 aaKnown RBP8.2□□□□□ -1.1
SIM1YIL123W SHU1P38751 150 aa8.19□□□□□ -1.1
SIM1YIL123W YAR029WP39549 74 aa8.19□□□□□ -1.1
SIM1YIL123W VTC1P40046 129 aaRIP-Chip data8.19□□□□□ -1.1not detected
SIM1YIL123W RPL18AP0CX49 186 aaKnown RBP8.18□□□□□ -1.1
SIM1YIL123W RPL18BP0CX50 186 aaKnown RBP8.18□□□□□ -1.1
SIM1YIL123W YFR057WP43625 151 aa8.18□□□□□ -1.1
SIM1YIL123W MRPS12P53732 153 aa8.18□□□□□ -1.1
SIM1YIL123W YIL102C-AQ2V2P5 75 aa8.18□□□□□ -1.1
SIM1YIL123W TMA7Q3E764 64 aaKnown RBP8.18□□□□□ -1.1
SIM1YIL123W CRC1Q12289 327 aa8.17□□□□□ -1.1
SIM1YIL123W YER085CP40058 173 aa8.16□□□□□ -1.1
SIM1YIL123W PAI3P01094 68 aa8.15□□□□□ -1.1
SIM1YIL123W YER181CP40097 107 aa8.15□□□□□ -1.1
SIM1YIL123W RPL28P02406 149 aaKnown RBP8.14□□□□□ -1.11
SIM1YIL123W QCR8P08525 94 aa8.14□□□□□ -1.11
SIM1YIL123W YLR122CQ12312 125 aa8.14□□□□□ -1.11
SIM1YIL123W YNL198CP40166 100 aa8.13□□□□□ -1.11
SIM1YIL123W YMR295CQ03559 197 aa8.13□□□□□ -1.11
SIM1YIL123W RDS3Q06835 107 aaPredicted RBP8.13□□□□□ -1.11
SIM1YIL123W UGX2P32772 223 aa8.12□□□□□ -1.11
SIM1YIL123W YBR219CP38317 127 aa8.12□□□□□ -1.11
SIM1YIL123W DYN1P36022 4092 aa8.1□□□□□ -1.11
SIM1YIL123W YNL190WP53872 204 aa8.1□□□□□ -1.11
SIM1YIL123W HAL1Q01766 294 aa8.1□□□□□ -1.11
SIM1YIL123W POP7P38291 140 aa8.09□□□□□ -1.11
SIM1YIL123W COX14P39103 70 aa8.09□□□□□ -1.11
SIM1YIL123W ERG28P40030 148 aa8.09□□□□□ -1.11
SIM1YIL123W PPT2Q12036 173 aa8.09□□□□□ -1.11
SIM1YIL123W ISU2Q12056 156 aa8.09□□□□□ -1.11
SIM1YIL123W ENV10Q99382 181 aa8.09□□□□□ -1.11
SIM1YIL123W AUA1P32450 94 aa8.07□□□□□ -1.12
SIM1YIL123W ADH1P00330 348 aaKnown RBP8.06□□□□□ -1.12
SIM1YIL123W ANB1P19211 157 aa8.06□□□□□ -1.12
SIM1YIL123W HYP2P23301 157 aaKnown RBP8.06□□□□□ -1.12
SIM1YIL123W YPR010C-AA5Z2X5 72 aa8.05□□□□□ -1.12
SIM1YIL123W MID2P36027 376 aa8.05□□□□□ -1.12
SIM1YIL123W LSM6Q06406 86 aaKnown RBP8.05□□□□□ -1.12
SIM1YIL123W RPL33AP05744 107 aaKnown RBP8.04□□□□□ -1.12
SIM1YIL123W TOA2P32774 122 aa8.04□□□□□ -1.12
SIM1YIL123W RPL33BP41056 107 aaKnown RBP8.04□□□□□ -1.12
SIM1YIL123W SPC1P46965 94 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms