RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C VHS2P40463 436 aa5.75□□□□□ -1.49
SNP1YIL061C YOR097CQ12274 175 aaPredicted RBP5.75□□□□□ -1.49
SNP1YIL061C UTP20P35194 2493 aaKnown RBP5.75□□□□□ -1.49
SNP1YIL061C URM1P40554 99 aaPredicted RBP5.74□□□□□ -1.49
SNP1YIL061C CWC27Q02770 301 aa5.74□□□□□ -1.49
SNP1YIL061C YGR035W-AQ45U48 73 aa5.74□□□□□ -1.49
SNP1YIL061C CYC7P00045 113 aa5.73□□□□□ -1.49
SNP1YIL061C YJR146WP47174 117 aa5.73□□□□□ -1.49
SNP1YIL061C DFM1Q12743 341 aaKnown RBP5.73□□□□□ -1.49
SNP1YIL061C YLR363W-AQ3E747 85 aa5.73□□□□□ -1.49
SNP1YIL061C RPL16AP26784 199 aaKnown RBP5.72□□□□□ -1.49
SNP1YIL061C YPL073CP40323 161 aa5.72□□□□□ -1.49
SNP1YIL061C AGE2P40529 298 aa5.72□□□□□ -1.49
SNP1YIL061C YDR274CP87283 123 aa5.72□□□□□ -1.49
SNP1YIL061C YPR170W-BP0C5R9 85 aa5.71□□□□□ -1.5
SNP1YIL061C MRP49P32388 137 aa5.71□□□□□ -1.5
SNP1YIL061C YDL022C-AP0C5L6 82 aa5.7□□□□□ -1.5
SNP1YIL061C YML079WQ03629 201 aa5.7□□□□□ -1.5
SNP1YIL061C YPL261CQ08976 102 aa5.7□□□□□ -1.5
SNP1YIL061C MBF1O14467 151 aaKnown RBP5.69□□□□□ -1.5
SNP1YIL061C ADH2P00331 348 aaKnown RBP5.69□□□□□ -1.5
SNP1YIL061C TRP1P00912 224 aa5.69□□□□□ -1.5
SNP1YIL061C YPS5P53057 165 aa5.69□□□□□ -1.5
SNP1YIL061C YKR041WP36134 250 aa5.68□□□□□ -1.5
SNP1YIL061C RPL32P38061 130 aaKnown RBP5.68□□□□□ -1.5
SNP1YIL061C YEL067CP39978 195 aa5.68□□□□□ -1.5
SNP1YIL061C RPS8AP0CX39 200 aaKnown RBP5.67□□□□□ -1.5
SNP1YIL061C RPS8BP0CX40 200 aaKnown RBP5.67□□□□□ -1.5
SNP1YIL061C UBC5P15732 148 aa5.67□□□□□ -1.5
SNP1YIL061C MLF3P32047 452 aa5.67□□□□□ -1.5
SNP1YIL061C KRE9P39005 276 aa5.67□□□□□ -1.5
SNP1YIL061C YNL217WP40152 326 aa5.67□□□□□ -1.5
SNP1YIL061C YNR077CP53758 84 aa5.67□□□□□ -1.5
SNP1YIL061C AIM11P87275 137 aa5.67□□□□□ -1.5
SNP1YIL061C ATP15P21306 62 aa5.66□□□□□ -1.5
SNP1YIL061C RPF1P38805 295 aaKnown RBP5.66□□□□□ -1.5
SNP1YIL061C COX12Q01519 83 aa5.66□□□□□ -1.5
SNP1YIL061C YBR126W-AQ8TGU7 68 aa5.66□□□□□ -1.5
SNP1YIL061C PMP3P87284 55 aa5.65□□□□□ -1.5
SNP1YIL061C YLR296WQ05898 108 aa5.65□□□□□ -1.5
SNP1YIL061C YKL023C-AQ2V2P3 75 aa5.65□□□□□ -1.5
SNP1YIL061C IGO2Q9P305 131 aa5.65□□□□□ -1.5
SNP1YIL061C ELC1Q03071 99 aa5.64□□□□□ -1.51
SNP1YIL061C YGR240C-AQ3E786 66 aa5.64□□□□□ -1.51
SNP1YIL061C YCR075W-AQ3E830 75 aa5.64□□□□□ -1.51
SNP1YIL061C AIM29P36154 155 aa5.63□□□□□ -1.51
SNP1YIL061C YEL008WP40001 126 aa5.63□□□□□ -1.51
SNP1YIL061C SCW10Q04951 389 aa5.63□□□□□ -1.51
SNP1YIL061C YLR194CQ05777 254 aa5.63□□□□□ -1.51
SNP1YIL061C TMA7Q3E764 64 aaKnown RBP5.63□□□□□ -1.51
SNP1YIL061C YBR209WP38311 105 aa5.62□□□□□ -1.51
SNP1YIL061C OXA1P39952 402 aa5.62□□□□□ -1.51
SNP1YIL061C VTC1P40046 129 aaRIP-Chip data5.62□□□□□ -1.51not detected
SNP1YIL061C CIN5P40917 295 aa5.62□□□□□ -1.51
SNP1YIL061C YIL102C-AQ2V2P5 75 aa5.62□□□□□ -1.51
SNP1YIL061C PEX17P40155 199 aa5.61□□□□□ -1.51
SNP1YIL061C YNL198CP40166 100 aa5.61□□□□□ -1.51
SNP1YIL061C YFR057WP43625 151 aa5.61□□□□□ -1.51
SNP1YIL061C YGL088WP53151 121 aa5.61□□□□□ -1.51
SNP1YIL061C MRPS12P53732 153 aa5.61□□□□□ -1.51
SNP1YIL061C VAM10Q08474 114 aa5.61□□□□□ -1.51
SNP1YIL061C YCR001WP25347 104 aa5.6□□□□□ -1.51
SNP1YIL061C ARC15P40518 154 aaRIP-Chip data5.6□□□□□ -1.51not detected
SNP1YIL061C YPT53P36019 220 aa5.59□□□□□ -1.51
SNP1YIL061C SHU1P38751 150 aa5.59□□□□□ -1.51
SNP1YIL061C YER181CP40097 107 aa5.59□□□□□ -1.51
SNP1YIL061C YIL059CP40520 121 aa5.59□□□□□ -1.51
SNP1YIL061C YMR122W-AQ3E842 84 aa5.59□□□□□ -1.51
SNP1YIL061C YCL021W-AQ96VH3 125 aa5.59□□□□□ -1.51
SNP1YIL061C PAI3P01094 68 aa5.58□□□□□ -1.52
SNP1YIL061C YAR029WP39549 74 aa5.58□□□□□ -1.52
SNP1YIL061C YER085CP40058 173 aa5.58□□□□□ -1.52
SNP1YIL061C YLR281CQ05863 155 aa5.58□□□□□ -1.52
SNP1YIL061C RPL18AP0CX49 186 aaKnown RBP5.57□□□□□ -1.52
SNP1YIL061C RPL18BP0CX50 186 aaKnown RBP5.57□□□□□ -1.52
SNP1YIL061C NRG2P38082 220 aa5.57□□□□□ -1.52
SNP1YIL061C ERI1P62651 68 aaKnown RBP5.57□□□□□ -1.52
SNP1YIL061C RPL28P02406 149 aaKnown RBP5.56□□□□□ -1.52
SNP1YIL061C QCR8P08525 94 aa5.56□□□□□ -1.52
SNP1YIL061C UGX2P32772 223 aa5.56□□□□□ -1.52
SNP1YIL061C ANB1P19211 157 aa5.55□□□□□ -1.52
SNP1YIL061C POP7P38291 140 aa5.55□□□□□ -1.52
SNP1YIL061C SGF11Q03067 99 aa5.55□□□□□ -1.52
SNP1YIL061C YMR295CQ03559 197 aa5.55□□□□□ -1.52
SNP1YIL061C CRC1Q12289 327 aa5.55□□□□□ -1.52
SNP1YIL061C HYP2P23301 157 aaKnown RBP5.54□□□□□ -1.52
SNP1YIL061C YBR219CP38317 127 aa5.54□□□□□ -1.52
SNP1YIL061C COX14P39103 70 aa5.53□□□□□ -1.52
SNP1YIL061C YNL190WP53872 204 aa5.53□□□□□ -1.52
SNP1YIL061C RDS3Q06835 107 aaPredicted RBP5.53□□□□□ -1.52
SNP1YIL061C LSM6Q06406 86 aaKnown RBP5.52□□□□□ -1.53
SNP1YIL061C ERG28P40030 148 aa5.51□□□□□ -1.53
SNP1YIL061C PPT2Q12036 173 aa5.51□□□□□ -1.53
SNP1YIL061C ADH1P00330 348 aaKnown RBP5.5□□□□□ -1.53
SNP1YIL061C CPR1P14832 162 aaKnown RBP5.5□□□□□ -1.53
SNP1YIL061C ENV10Q99382 181 aa5.5□□□□□ -1.53
SNP1YIL061C TOA2P32774 122 aa5.49□□□□□ -1.53
SNP1YIL061C MID2P36027 376 aa5.49□□□□□ -1.53
SNP1YIL061C RPL33AP05744 107 aaKnown RBP5.48□□□□□ -1.53
SNP1YIL061C AUA1P32450 94 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms