RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W NUP42P49686 430 aaKnown RBP10.21□□□□□ -0.77
RPN10YHR200W YGL230CP53074 147 aa10.21□□□□□ -0.77
RPN10YHR200W YLR112WQ12130 139 aa10.21□□□□□ -0.77
RPN10YHR200W ADH2P00331 348 aaKnown RBP10.2□□□□□ -0.78
RPN10YHR200W TRP1P00912 224 aa10.2□□□□□ -0.78
RPN10YHR200W SEC11P15367 167 aa10.2□□□□□ -0.78
RPN10YHR200W RPL16AP26784 199 aaKnown RBP10.19□□□□□ -0.78
RPN10YHR200W YJR146WP47174 117 aa10.19□□□□□ -0.78
RPN10YHR200W HAL1Q01766 294 aa10.19□□□□□ -0.78
RPN10YHR200W CRC1Q12289 327 aa10.19□□□□□ -0.78
RPN10YHR200W COA3Q3E7B2 85 aa10.19□□□□□ -0.78
RPN10YHR200W YDL085C-AQ3E7B7 68 aaKnown RBP10.19□□□□□ -0.78
RPN10YHR200W SCW10Q04951 389 aa10.18□□□□□ -0.78
RPN10YHR200W RDS3Q06835 107 aaPredicted RBP10.18□□□□□ -0.78
RPN10YHR200W YKL044WP36092 106 aa10.17□□□□□ -0.78
RPN10YHR200W LSO2Q3E772 92 aaKnown RBP10.17□□□□□ -0.78
RPN10YHR200W YPT53P36019 220 aa10.16□□□□□ -0.78
RPN10YHR200W YKL070WP36087 169 aa10.16□□□□□ -0.78
RPN10YHR200W AIM29P36154 155 aa10.16□□□□□ -0.78
RPN10YHR200W YBR209WP38311 105 aa10.16□□□□□ -0.78
RPN10YHR200W ARC15P40518 154 aaRIP-Chip data10.16□□□□□ -0.78not detected
RPN10YHR200W SAE3P89114 91 aa10.16□□□□□ -0.78
RPN10YHR200W BET5Q03630 159 aa10.16□□□□□ -0.78
RPN10YHR200W NAT5Q08689 176 aa10.16□□□□□ -0.78
RPN10YHR200W YDL157CQ12082 118 aa10.16□□□□□ -0.78
RPN10YHR200W RPL31AP0C2H8 113 aaKnown RBP10.15□□□□□ -0.78
RPN10YHR200W RPS8AP0CX39 200 aaKnown RBP10.15□□□□□ -0.78
RPN10YHR200W RPS8BP0CX40 200 aaKnown RBP10.15□□□□□ -0.78
RPN10YHR200W YIL059CP40520 121 aa10.15□□□□□ -0.78
RPN10YHR200W YMR122W-AQ3E842 84 aa10.15□□□□□ -0.78
RPN10YHR200W SCS22Q6Q595 175 aa10.15□□□□□ -0.78
RPN10YHR200W AUA1P32450 94 aa10.13□□□□□ -0.79
RPN10YHR200W YCL021W-AQ96VH3 125 aa10.13□□□□□ -0.79
RPN10YHR200W YAR029WP39549 74 aa10.12□□□□□ -0.79
RPN10YHR200W YRA2P36036 203 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79not detected
RPN10YHR200W SPC1P46965 94 aa10.11□□□□□ -0.79
RPN10YHR200W DFM1Q12743 341 aaKnown RBP10.1□□□□□ -0.79
RPN10YHR200W YPR010C-AA5Z2X5 72 aa10.09□□□□□ -0.79
RPN10YHR200W RPL32P38061 130 aaKnown RBP10.09□□□□□ -0.79
RPN10YHR200W YGL088WP53151 121 aa10.09□□□□□ -0.79
RPN10YHR200W PAU23Q07987 124 aa10.09□□□□□ -0.79
RPN10YHR200W PAU17Q12370 124 aa10.09□□□□□ -0.79
RPN10YHR200W YPL261CQ08976 102 aa10.08□□□□□ -0.8
RPN10YHR200W YEL008WP40001 126 aa10.07□□□□□ -0.8
RPN10YHR200W YPL073CP40323 161 aa10.06□□□□□ -0.8
RPN10YHR200W ATP15P21306 62 aa10.05□□□□□ -0.8
RPN10YHR200W GLC8P41818 229 aa10.05□□□□□ -0.8
RPN10YHR200W AIM11P87275 137 aa10.04□□□□□ -0.8
RPN10YHR200W ERG28P40030 148 aa10.03□□□□□ -0.8
RPN10YHR200W PEX17P40155 199 aa10.02□□□□□ -0.81
RPN10YHR200W YGL015CP33199 130 aa10.01□□□□□ -0.81
RPN10YHR200W YER085CP40058 173 aa10.01□□□□□ -0.81
RPN10YHR200W CWC27Q02770 301 aa10.01□□□□□ -0.81
RPN10YHR200W YML079WQ03629 201 aa10.01□□□□□ -0.81
RPN10YHR200W ENV10Q99382 181 aa10.01□□□□□ -0.81
RPN10YHR200W YKR041WP36134 250 aa10□□□□□ -0.81
RPN10YHR200W YLR194CQ05777 254 aa10□□□□□ -0.81
RPN10YHR200W IGO2Q9P305 131 aa9.99□□□□□ -0.81
RPN10YHR200W RPF1P38805 295 aaKnown RBP9.98□□□□□ -0.81
RPN10YHR200W PPT2Q12036 173 aa9.98□□□□□ -0.81
RPN10YHR200W RPL33AP05744 107 aaKnown RBP9.97□□□□□ -0.81
RPN10YHR200W HAP3P13434 144 aa9.97□□□□□ -0.81
RPN10YHR200W SHU1P38751 150 aa9.97□□□□□ -0.81
RPN10YHR200W RPL33BP41056 107 aaKnown RBP9.97□□□□□ -0.81
RPN10YHR200W RPL18AP0CX49 186 aaKnown RBP9.95□□□□□ -0.82
RPN10YHR200W RPL18BP0CX50 186 aaKnown RBP9.95□□□□□ -0.82
RPN10YHR200W YLR363W-AQ3E747 85 aa9.95□□□□□ -0.82
RPN10YHR200W QCR8P08525 94 aa9.94□□□□□ -0.82
RPN10YHR200W RPR2P40571 144 aa9.94□□□□□ -0.82
RPN10YHR200W RTC6O14464 93 aa9.93□□□□□ -0.82
RPN10YHR200W YMR295CQ03559 197 aa9.92□□□□□ -0.82
RPN10YHR200W YMR320WQ04897 101 aa9.92□□□□□ -0.82
RPN10YHR200W YMR175W-AQ3E766 64 aa9.92□□□□□ -0.82
RPN10YHR200W PBA1Q05778 276 aa9.91□□□□□ -0.82
RPN10YHR200W YDL022C-AP0C5L6 82 aa9.9□□□□□ -0.82
RPN10YHR200W SVP26P38869 228 aa9.89□□□□□ -0.83
RPN10YHR200W ELC1Q03071 99 aa9.89□□□□□ -0.83
RPN10YHR200W YBR219CP38317 127 aa9.88□□□□□ -0.83
RPN10YHR200W ADH1P00330 348 aaKnown RBP9.87□□□□□ -0.83
RPN10YHR200W RPL11AP0C0W9 174 aaKnown RBP9.87□□□□□ -0.83
RPN10YHR200W RPC10P40422 70 aa9.87□□□□□ -0.83
RPN10YHR200W CIN5P40917 295 aa9.87□□□□□ -0.83
RPN10YHR200W RPL11BQ3E757 174 aaPredicted RBP9.87□□□□□ -0.83
RPN10YHR200W RPL28P02406 149 aaKnown RBP9.86□□□□□ -0.83
RPN10YHR200W COX14P39103 70 aa9.86□□□□□ -0.83
RPN10YHR200W OXA1P39952 402 aa9.85□□□□□ -0.83
RPN10YHR200W YEL067CP39978 195 aa9.85□□□□□ -0.83
RPN10YHR200W YNR077CP53758 84 aa9.85□□□□□ -0.83
RPN10YHR200W YLL066W-BQ8TGJ7 56 aa9.85□□□□□ -0.83
RPN10YHR200W DIF1O13577 133 aa9.83□□□□□ -0.84
RPN10YHR200W TOA2P32774 122 aa9.83□□□□□ -0.84
RPN10YHR200W YDL241WQ07738 123 aa9.83□□□□□ -0.84
RPN10YHR200W YDR115WQ04598 105 aa9.82□□□□□ -0.84
RPN10YHR200W UGX2P32772 223 aa9.81□□□□□ -0.84
RPN10YHR200W MRPS12P53732 153 aa9.81□□□□□ -0.84
RPN10YHR200W UIP3P39547 235 aa9.8□□□□□ -0.84
RPN10YHR200W VTC1P40046 129 aaRIP-Chip data9.79□□□□□ -0.84not detected
RPN10YHR200W YER181CP40097 107 aa9.79□□□□□ -0.84
RPN10YHR200W YKL023C-AQ2V2P3 75 aa9.79□□□□□ -0.84
RPN10YHR200W PAI3P01094 68 aa9.78□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms