RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W AGE2P40529 298 aa11.35□□□□□ -0.59
RTC3YHR087W YKL070WP36087 169 aa11.33□□□□□ -0.6
RTC3YHR087W URM1P40554 99 aaPredicted RBP11.33□□□□□ -0.6
RTC3YHR087W CWC27Q02770 301 aa11.31□□□□□ -0.6
RTC3YHR087W YJR146WP47174 117 aa11.29□□□□□ -0.6
RTC3YHR087W YBR126W-AQ8TGU7 68 aa11.29□□□□□ -0.6
RTC3YHR087W RPL16AP26784 199 aaKnown RBP11.26□□□□□ -0.61
RTC3YHR087W YCR075W-AQ3E830 75 aa11.26□□□□□ -0.61
RTC3YHR087W TRP1P00912 224 aa11.25□□□□□ -0.61
RTC3YHR087W UIP3P39547 235 aa11.25□□□□□ -0.61
RTC3YHR087W YPL073CP40323 161 aa11.25□□□□□ -0.61
RTC3YHR087W YPS5P53057 165 aa11.25□□□□□ -0.61
RTC3YHR087W COX12Q01519 83 aa11.25□□□□□ -0.61
RTC3YHR087W YML079WQ03629 201 aa11.25□□□□□ -0.61
RTC3YHR087W YLR363W-AQ3E747 85 aa11.25□□□□□ -0.61
RTC3YHR087W MLF3P32047 452 aa11.24□□□□□ -0.61
RTC3YHR087W YNL217WP40152 326 aa11.23□□□□□ -0.61
RTC3YHR087W YPL261CQ08976 102 aa11.23□□□□□ -0.61
RTC3YHR087W MRP49P32388 137 aa11.22□□□□□ -0.61
RTC3YHR087W PMP3P87284 55 aa11.22□□□□□ -0.61
RTC3YHR087W ADH2P00331 348 aaKnown RBP11.21□□□□□ -0.61
RTC3YHR087W UBC5P15732 148 aa11.21□□□□□ -0.61
RTC3YHR087W RPL32P38061 130 aaKnown RBP11.2□□□□□ -0.62
RTC3YHR087W KRE9P39005 276 aa11.19□□□□□ -0.62
RTC3YHR087W DFM1Q12743 341 aaKnown RBP11.19□□□□□ -0.62
RTC3YHR087W YGR240C-AQ3E786 66 aa11.19□□□□□ -0.62
RTC3YHR087W YKR041WP36134 250 aa11.17□□□□□ -0.62
RTC3YHR087W AIM11P87275 137 aa11.17□□□□□ -0.62
RTC3YHR087W YDL022C-AP0C5L6 82 aa11.16□□□□□ -0.62
RTC3YHR087W RPS8AP0CX39 200 aaKnown RBP11.16□□□□□ -0.62
RTC3YHR087W RPS8BP0CX40 200 aaKnown RBP11.16□□□□□ -0.62
RTC3YHR087W VAM10Q08474 114 aa11.16□□□□□ -0.62
RTC3YHR087W RPF1P38805 295 aaKnown RBP11.15□□□□□ -0.62
RTC3YHR087W ATP15P21306 62 aa11.14□□□□□ -0.63
RTC3YHR087W YLR281CQ05863 155 aa11.14□□□□□ -0.63
RTC3YHR087W YPR170W-BP0C5R9 85 aa11.13□□□□□ -0.63
RTC3YHR087W AIM29P36154 155 aa11.13□□□□□ -0.63
RTC3YHR087W SCW10Q04951 389 aa11.13□□□□□ -0.63
RTC3YHR087W IGO2Q9P305 131 aa11.13□□□□□ -0.63
RTC3YHR087W MBF1O14467 151 aaKnown RBP11.11□□□□□ -0.63
RTC3YHR087W YEL067CP39978 195 aa11.11□□□□□ -0.63
RTC3YHR087W YEL008WP40001 126 aa11.11□□□□□ -0.63
RTC3YHR087W YLR194CQ05777 254 aa11.11□□□□□ -0.63
RTC3YHR087W YCR001WP25347 104 aa11.1□□□□□ -0.63
RTC3YHR087W YBR209WP38311 105 aa11.1□□□□□ -0.63
RTC3YHR087W YNR077CP53758 84 aa11.1□□□□□ -0.63
RTC3YHR087W ELC1Q03071 99 aa11.1□□□□□ -0.63
RTC3YHR087W PEX17P40155 199 aa11.09□□□□□ -0.63
RTC3YHR087W YKL023C-AQ2V2P3 75 aa11.09□□□□□ -0.63
RTC3YHR087W ARC15P40518 154 aaRIP-Chip data11.08□□□□□ -0.64not detected
RTC3YHR087W ERI1P62651 68 aaKnown RBP11.08□□□□□ -0.64
RTC3YHR087W YMR122W-AQ3E842 84 aa11.08□□□□□ -0.64
RTC3YHR087W YCL021W-AQ96VH3 125 aa11.08□□□□□ -0.64
RTC3YHR087W YAR029WP39549 74 aa11.07□□□□□ -0.64
RTC3YHR087W YIL059CP40520 121 aa11.07□□□□□ -0.64
RTC3YHR087W YLR296WQ05898 108 aa11.07□□□□□ -0.64
RTC3YHR087W YGL088WP53151 121 aa11.06□□□□□ -0.64
RTC3YHR087W SGF11Q03067 99 aa11.06□□□□□ -0.64
RTC3YHR087W YPT53P36019 220 aa11.05□□□□□ -0.64
RTC3YHR087W OXA1P39952 402 aa11.04□□□□□ -0.64
RTC3YHR087W NRG2P38082 220 aa11.03□□□□□ -0.64
RTC3YHR087W SHU1P38751 150 aa11.03□□□□□ -0.64
RTC3YHR087W CIN5P40917 295 aa11.03□□□□□ -0.64
RTC3YHR087W YIL102C-AQ2V2P5 75 aa11.02□□□□□ -0.65
RTC3YHR087W QCR8P08525 94 aa11.01□□□□□ -0.65
RTC3YHR087W CRC1Q12289 327 aa11.01□□□□□ -0.65
RTC3YHR087W YLR122CQ12312 125 aa11.01□□□□□ -0.65
RTC3YHR087W RPL18AP0CX49 186 aaKnown RBP11□□□□□ -0.65
RTC3YHR087W RPL18BP0CX50 186 aaKnown RBP11□□□□□ -0.65
RTC3YHR087W VTC1P40046 129 aaRIP-Chip data11□□□□□ -0.65not detected
RTC3YHR087W MRPS12P53732 153 aa11□□□□□ -0.65
RTC3YHR087W YER181CP40097 107 aa10.99□□□□□ -0.65
RTC3YHR087W PAI3P01094 68 aa10.98□□□□□ -0.65
RTC3YHR087W YFR057WP43625 151 aa10.98□□□□□ -0.65
RTC3YHR087W YER085CP40058 173 aa10.97□□□□□ -0.65
RTC3YHR087W TMA7Q3E764 64 aaKnown RBP10.96□□□□□ -0.65
RTC3YHR087W RDS3Q06835 107 aaPredicted RBP10.95□□□□□ -0.66
RTC3YHR087W UGX2P32772 223 aa10.94□□□□□ -0.66
RTC3YHR087W ERG28P40030 148 aa10.94□□□□□ -0.66
RTC3YHR087W YMR295CQ03559 197 aa10.94□□□□□ -0.66
RTC3YHR087W RPL28P02406 149 aaKnown RBP10.93□□□□□ -0.66
RTC3YHR087W POP7P38291 140 aa10.93□□□□□ -0.66
RTC3YHR087W YNL198CP40166 100 aa10.93□□□□□ -0.66
RTC3YHR087W PPT2Q12036 173 aa10.93□□□□□ -0.66
RTC3YHR087W YBR219CP38317 127 aa10.92□□□□□ -0.66
RTC3YHR087W ENV10Q99382 181 aa10.92□□□□□ -0.66
RTC3YHR087W COX14P39103 70 aa10.91□□□□□ -0.66
RTC3YHR087W HAL1Q01766 294 aa10.91□□□□□ -0.66
RTC3YHR087W YPR010C-AA5Z2X5 72 aa10.9□□□□□ -0.66
RTC3YHR087W ANB1P19211 157 aa10.89□□□□□ -0.67
RTC3YHR087W ADH1P00330 348 aaKnown RBP10.88□□□□□ -0.67
RTC3YHR087W HYP2P23301 157 aaKnown RBP10.88□□□□□ -0.67
RTC3YHR087W SPC1P46965 94 aa10.88□□□□□ -0.67
RTC3YHR087W ISU2Q12056 156 aa10.87□□□□□ -0.67
RTC3YHR087W AUA1P32450 94 aa10.86□□□□□ -0.67
RTC3YHR087W TOA2P32774 122 aa10.86□□□□□ -0.67
RTC3YHR087W YNL190WP53872 204 aa10.86□□□□□ -0.67
RTC3YHR087W LSM6Q06406 86 aaKnown RBP10.86□□□□□ -0.67
RTC3YHR087W RPL33AP05744 107 aaKnown RBP10.84□□□□□ -0.67
RTC3YHR087W RPL33BP41056 107 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms