RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeastyeast

Gene VMA22, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA22YHR060W GCV3P39726 170 aaPredicted RBP2.28□□□□□ -2.04
VMA22YHR060W MGR2Q02889 113 aa2.28□□□□□ -2.04
VMA22YHR060W YCR095W-AQ3E787 52 aa2.28□□□□□ -2.04
VMA22YHR060W YMR082CQ04276 118 aa2.27□□□□□ -2.05
VMA22YHR060W PDR10P51533 1564 aa2.27□□□□□ -2.05
VMA22YHR060W ROX3P25046 220 aa2.26□□□□□ -2.05
VMA22YHR060W RSM18P40033 138 aa2.26□□□□□ -2.05
VMA22YHR060W SNA2P56508 79 aa2.26□□□□□ -2.05
VMA22YHR060W SCP1Q08873 200 aa2.26□□□□□ -2.05
VMA22YHR060W CCW14O13547 238 aa2.25□□□□□ -2.05
VMA22YHR060W YOL013W-AP0C272 63 aaPredicted RBP2.25□□□□□ -2.05
VMA22YHR060W PAU5P43575 122 aa2.25□□□□□ -2.05
VMA22YHR060W IMP2P46972 177 aa2.25□□□□□ -2.05
VMA22YHR060W YDR042CQ03205 200 aa2.25□□□□□ -2.05
VMA22YHR060W MVB12P42939 101 aa2.24□□□□□ -2.05
VMA22YHR060W RRT15Q3E811 62 aa2.23□□□□□ -2.05
VMA22YHR060W COX12Q01519 83 aa2.22□□□□□ -2.05
VMA22YHR060W LCL2Q08045 131 aa2.22□□□□□ -2.05
VMA22YHR060W YPL038W-AQ3E7B4 63 aa2.22□□□□□ -2.05
VMA22YHR060W MHF2Q3E829 80 aa2.22□□□□□ -2.05
VMA22YHR060W HUG1Q6Q5K6 68 aa2.21□□□□□ -2.06
VMA22YHR060W MRP17P28778 131 aa2.2□□□□□ -2.06
VMA22YHR060W BPT1P14772 1559 aa2.19□□□□□ -2.06
VMA22YHR060W SRB8P25648 1427 aa2.19□□□□□ -2.06
VMA22YHR060W SWR1Q05471 1514 aa2.19□□□□□ -2.06
VMA22YHR060W MRPS12P53732 153 aa2.19□□□□□ -2.06
VMA22YHR060W YRF1-3P0CX14 1859 aa2.19□□□□□ -2.06
VMA22YHR060W YRF1-7P0CX15 1859 aa2.19□□□□□ -2.06
VMA22YHR060W YRF1-6P53819 1859 aa2.19□□□□□ -2.06
VMA22YHR060W ICY1Q04329 127 aa2.18□□□□□ -2.06
VMA22YHR060W YKL068W-AQ3E826 78 aa2.18□□□□□ -2.06
VMA22YHR060W YHR213W-BQ8TGK1 99 aa2.18□□□□□ -2.06
VMA22YHR060W CYR1P08678 2026 aaKnown RBP2.18□□□□□ -2.06
VMA22YHR060W CDC39P25655 2108 aaKnown RBP2.17□□□□□ -2.06
VMA22YHR060W UBR2Q07963 1872 aa2.16□□□□□ -2.06
VMA22YHR060W RPA190P10964 1664 aaKnown RBP2.16□□□□□ -2.06
VMA22YHR060W HUA1P40325 198 aa2.16□□□□□ -2.06
VMA22YHR060W AIM19P40502 157 aa2.15□□□□□ -2.07
VMA22YHR060W GSC2P40989 1895 aa2.15□□□□□ -2.07
VMA22YHR060W GDB1Q06625 1536 aa2.15□□□□□ -2.07
VMA22YHR060W PAU6P0CE90 120 aa2.14□□□□□ -2.07
VMA22YHR060W PAU18P0CE91 120 aa2.14□□□□□ -2.07
VMA22YHR060W YBL071CP38185 102 aa2.14□□□□□ -2.07
VMA22YHR060W HHY1P39982 102 aa2.14□□□□□ -2.07
VMA22YHR060W YDR210WQ03482 75 aa2.14□□□□□ -2.07
VMA22YHR060W YSP2Q06681 1438 aa2.14□□□□□ -2.07
VMA22YHR060W TY4B-JP47024 1803 aa2.14□□□□□ -2.07
VMA22YHR060W MRPL38P35996 138 aaPredicted RBP2.13□□□□□ -2.07
VMA22YHR060W SPC1P46965 94 aa2.13□□□□□ -2.07
VMA22YHR060W YJR128WP47162 119 aa2.13□□□□□ -2.07
VMA22YHR060W MRX7P53869 86 aa2.13□□□□□ -2.07
VMA22YHR060W COX19Q3E731 98 aa2.13□□□□□ -2.07
VMA22YHR060W ESC1Q03661 1658 aaKnown RBP2.12□□□□□ -2.07
VMA22YHR060W ACC1Q00955 2233 aaKnown RBP2.12□□□□□ -2.07
VMA22YHR060W YIL086CP40503 102 aa2.12□□□□□ -2.07
VMA22YHR060W LCL1Q02786 101 aa2.12□□□□□ -2.07
VMA22YHR060W PAU1P0CE88 120 aa2.11□□□□□ -2.07
VMA22YHR060W PAU14P0CE89 120 aa2.11□□□□□ -2.07
VMA22YHR060W PAU8P0CE92 120 aa2.11□□□□□ -2.07
VMA22YHR060W PAU11P0CE93 120 aa2.11□□□□□ -2.07
VMA22YHR060W PAU13P38725 120 aa2.11□□□□□ -2.07
VMA22YHR060W YMR141CP40211 102 aa2.11□□□□□ -2.07
VMA22YHR060W PAU4P53427 120 aa2.11□□□□□ -2.07
VMA22YHR060W PAU10Q03050 120 aa2.11□□□□□ -2.07
VMA22YHR060W YMR175W-AQ3E766 64 aa2.11□□□□□ -2.07
VMA22YHR060W PAU9Q3E770 120 aa2.11□□□□□ -2.07
VMA22YHR060W YCR085WP25650 117 aa2.1□□□□□ -2.07
VMA22YHR060W RPA12P32529 125 aaKnown RBP2.1□□□□□ -2.07
VMA22YHR060W YBR292CP38357 123 aa2.1□□□□□ -2.07
VMA22YHR060W CWP2P43497 92 aa2.1□□□□□ -2.07
VMA22YHR060W PAU20Q08322 120 aa2.1□□□□□ -2.07
VMA22YHR060W YLR255CO13574 117 aa2.09□□□□□ -2.07
VMA22YHR060W NHP2P32495 156 aaPredicted RBP2.09□□□□□ -2.07
VMA22YHR060W SHU1P38751 150 aa2.09□□□□□ -2.07
VMA22YHR060W MPC2P38857 129 aa2.08□□□□□ -2.08
VMA22YHR060W YNR034W-AQ3E841 98 aa2.08□□□□□ -2.08
VMA22YHR060W BNI1P41832 1953 aa2.08□□□□□ -2.08
VMA22YHR060W BSC4P53841 131 aa2.07□□□□□ -2.08
VMA22YHR060W YOR343CQ12484 108 aa2.06□□□□□ -2.08
VMA22YHR060W POL1P13382 1468 aa2.06□□□□□ -2.08
VMA22YHR060W NTE1Q04958 1679 aa2.06□□□□□ -2.08
VMA22YHR060W RPS11AP0CX47 156 aaKnown RBP2.05□□□□□ -2.08
VMA22YHR060W RPS11BP0CX48 156 aaKnown RBP2.05□□□□□ -2.08
VMA22YHR060W TOM6P33448 61 aa2.05□□□□□ -2.08
VMA22YHR060W PDX3P38075 228 aaKnown RBP2.02□□□□□ -2.09
VMA22YHR060W POC4Q12245 148 aaPredicted RBP2.02□□□□□ -2.09
VMA22YHR060W RPL37AP49166 88 aaKnown RBP2.01□□□□□ -2.09
VMA22YHR060W YOR034C-AQ3E735 80 aa2.01□□□□□ -2.09
VMA22YHR060W ESP1Q03018 1630 aa1.99□□□□□ -2.09
VMA22YHR060W YBR072C-AQ3E794 53 aa1.99□□□□□ -2.09
VMA22YHR060W YHR214C-DP0CX93 97 aa1.98□□□□□ -2.09
VMA22YHR060W YKL065W-AQ2V2P2 73 aa1.98□□□□□ -2.09
VMA22YHR060W YHR213W-AQ8TGT4 77 aa1.97□□□□□ -2.09
VMA22YHR060W MMS22Q06164 1454 aa1.96□□□□□ -2.1
VMA22YHR060W FPR2P32472 135 aa1.96□□□□□ -2.1
VMA22YHR060W YHR173CP38864 112 aa1.96□□□□□ -2.1
VMA22YHR060W YOR105WQ08504 108 aa1.96□□□□□ -2.1
VMA22YHR060W YDR381C-AQ3E6R5 114 aa1.96□□□□□ -2.1
VMA22YHR060W RPL43AP0CX25 92 aaKnown RBP1.95□□□□□ -2.1
VMA22YHR060W RPL43BP0CX26 92 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms