RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W VMA10P48836 114 aaKnown RBP1.85□□□□□ -2.11
PTI1YGR156W HHO1P53551 258 aa1.85□□□□□ -2.11
PTI1YGR156W YCL001W-AP87012 153 aa1.85□□□□□ -2.11
PTI1YGR156W HOR7Q05827 59 aa1.85□□□□□ -2.11
PTI1YGR156W CMC4Q3E7A9 73 aa1.85□□□□□ -2.11
PTI1YGR156W YMR105W-AQ8TGS8 64 aa1.85□□□□□ -2.11
PTI1YGR156W COX5BP00425 151 aa1.84□□□□□ -2.11
PTI1YGR156W YHR212W-AP0CX91 67 aa1.84□□□□□ -2.11
PTI1YGR156W AUA1P32450 94 aa1.84□□□□□ -2.11
PTI1YGR156W YHR140WP38842 239 aa1.84□□□□□ -2.11
PTI1YGR156W VPS55P47111 140 aa1.84□□□□□ -2.11
PTI1YGR156W YPR203WQ08994 102 aa1.84□□□□□ -2.11
PTI1YGR156W SPC3Q12133 184 aa1.84□□□□□ -2.11
PTI1YGR156W ATP14Q12349 124 aa1.84□□□□□ -2.11
PTI1YGR156W YLR361C-AQ3E795 98 aa1.84□□□□□ -2.11
PTI1YGR156W RPL14AP36105 138 aaKnown RBP1.83□□□□□ -2.12
PTI1YGR156W RPS20P38701 121 aaKnown RBP1.83□□□□□ -2.12
PTI1YGR156W RPL14BP38754 138 aaKnown RBP1.83□□□□□ -2.12
PTI1YGR156W IPT1P38954 527 aa1.83□□□□□ -2.12
PTI1YGR156W YNL019CP53975 284 aa1.83□□□□□ -2.12
PTI1YGR156W ATP19P81451 68 aa1.83□□□□□ -2.12
PTI1YGR156W KEI1Q06346 221 aa1.83□□□□□ -2.12
PTI1YGR156W GPI11Q06636 219 aa1.83□□□□□ -2.12
PTI1YGR156W COX9P07255 59 aa1.81□□□□□ -2.12
PTI1YGR156W DYN2Q02647 92 aa1.81□□□□□ -2.12
PTI1YGR156W SPC24Q04477 213 aa1.81□□□□□ -2.12
PTI1YGR156W TVP18Q04767 167 aa1.81□□□□□ -2.12
PTI1YGR156W FMP49A0A023PZB3 126 aa1.8□□□□□ -2.12
PTI1YGR156W ADK1P07170 222 aaKnown RBP1.8□□□□□ -2.12
PTI1YGR156W YEL014CP39999 101 aa1.8□□□□□ -2.12
PTI1YGR156W HPM1P40481 377 aa1.8□□□□□ -2.12
PTI1YGR156W GNA1P43577 159 aaPredicted RBP1.8□□□□□ -2.12
PTI1YGR156W YGR017WP53210 297 aa1.8□□□□□ -2.12
PTI1YGR156W CNL1Q06333 122 aa1.8□□□□□ -2.12
PTI1YGR156W LSM8P47093 109 aaKnown RBP1.79□□□□□ -2.12
PTI1YGR156W FYV5P25585 152 aa1.78□□□□□ -2.12
PTI1YGR156W YCR050CP25630 102 aa1.78□□□□□ -2.12
PTI1YGR156W SRL3P36167 246 aa1.78□□□□□ -2.12
PTI1YGR156W ATG8P38182 117 aaRIP-Chip data1.78□□□□□ -2.12not detected
PTI1YGR156W DIE2P50076 525 aa1.78□□□□□ -2.12
PTI1YGR156W ELC1Q03071 99 aa1.78□□□□□ -2.12
PTI1YGR156W SOM1Q05676 74 aa1.78□□□□□ -2.12
PTI1YGR156W YOR385WQ08909 290 aa1.78□□□□□ -2.12
PTI1YGR156W VAR1P02381 398 aa1.77□□□□□ -2.13
PTI1YGR156W YKR070WP36151 352 aaKnown RBP1.77□□□□□ -2.13
PTI1YGR156W YAL064WP39711 94 aa1.77□□□□□ -2.13
PTI1YGR156W SPG1P50088 95 aa1.77□□□□□ -2.13
PTI1YGR156W COX12Q01519 83 aa1.77□□□□□ -2.13
PTI1YGR156W HUT1Q12520 339 aa1.77□□□□□ -2.13
PTI1YGR156W NHP6AP11632 93 aaKnown RBP1.76□□□□□ -2.13
PTI1YGR156W PAU12P53343 120 aa1.76□□□□□ -2.13
PTI1YGR156W FIT1Q04433 528 aa1.76□□□□□ -2.13
PTI1YGR156W YPR153WQ06537 140 aa1.76□□□□□ -2.13
PTI1YGR156W VAM10Q08474 114 aa1.76□□□□□ -2.13
PTI1YGR156W MRP49P32388 137 aa1.75□□□□□ -2.13
PTI1YGR156W YHR138CP38841 114 aaPredicted RBP1.75□□□□□ -2.13
PTI1YGR156W GAT4P40569 121 aa1.75□□□□□ -2.13
PTI1YGR156W FCY1Q12178 158 aa1.75□□□□□ -2.13
PTI1YGR156W YNL277W-AQ3E7Z0 62 aa1.75□□□□□ -2.13
PTI1YGR156W PRE1P22141 198 aaKnown RBP1.74□□□□□ -2.13
PTI1YGR156W PAU24P38155 120 aa1.74□□□□□ -2.13
PTI1YGR156W YBR027CP38220 110 aa1.74□□□□□ -2.13
PTI1YGR156W YER137CP40083 148 aaKnown RBP1.74□□□□□ -2.13
PTI1YGR156W POR2P40478 281 aa1.74□□□□□ -2.13
PTI1YGR156W PAU2P32612 120 aa1.73□□□□□ -2.13
PTI1YGR156W PHS1P40857 217 aa1.73□□□□□ -2.13
PTI1YGR156W SFT1P43682 97 aa1.73□□□□□ -2.13
PTI1YGR156W YGL149WP53116 101 aa1.73□□□□□ -2.13
PTI1YGR156W SGF11Q03067 99 aa1.73□□□□□ -2.13
PTI1YGR156W YKL068W-AQ3E826 78 aa1.73□□□□□ -2.13
PTI1YGR156W YLR365WQ7LIF2 110 aa1.73□□□□□ -2.13
PTI1YGR156W FUN14P18411 198 aa1.72□□□□□ -2.13
PTI1YGR156W MRPL38P35996 138 aaPredicted RBP1.72□□□□□ -2.13
PTI1YGR156W QCR10P37299 77 aa1.72□□□□□ -2.13
PTI1YGR156W DCV1P43595 202 aa1.72□□□□□ -2.13
PTI1YGR156W TMA23Q03525 211 aa1.72□□□□□ -2.13
PTI1YGR156W SEN15Q04675 128 aa1.72□□□□□ -2.13
PTI1YGR156W WIP1Q2V2P8 89 aa1.72□□□□□ -2.13
PTI1YGR156W YOS1Q3E834 85 aa1.72□□□□□ -2.13
PTI1YGR156W FPR2P32472 135 aa1.71□□□□□ -2.14
PTI1YGR156W SNF11P38956 169 aa1.71□□□□□ -2.14
PTI1YGR156W SAE3P89114 91 aa1.71□□□□□ -2.14
PTI1YGR156W SDH7Q04401 133 aa1.71□□□□□ -2.14
PTI1YGR156W NAT5Q08689 176 aa1.71□□□□□ -2.14
PTI1YGR156W YPR108W-AQ3E7B3 70 aa1.71□□□□□ -2.14
PTI1YGR156W YCR075W-AQ3E830 75 aa1.71□□□□□ -2.14
PTI1YGR156W HYP2P23301 157 aaKnown RBP1.7□□□□□ -2.14
PTI1YGR156W PDX3P38075 228 aaKnown RBP1.7□□□□□ -2.14
PTI1YGR156W YGL258W-AQ3E740 77 aa1.7□□□□□ -2.14
PTI1YGR156W MRPL44P19956 98 aa1.69□□□□□ -2.14
PTI1YGR156W BUD23P25627 275 aaPredicted RBP1.69□□□□□ -2.14
PTI1YGR156W UTP11P34247 250 aaPredicted RBP1.69□□□□□ -2.14
PTI1YGR156W SFT2P38166 215 aa1.69□□□□□ -2.14
PTI1YGR156W YBL071CP38185 102 aa1.69□□□□□ -2.14
PTI1YGR156W VMA7P39111 118 aa1.69□□□□□ -2.14
PTI1YGR156W SPC1P46965 94 aa1.69□□□□□ -2.14
PTI1YGR156W FRQ1Q06389 190 aa1.69□□□□□ -2.14
PTI1YGR156W LCL2Q08045 131 aa1.69□□□□□ -2.14
PTI1YGR156W SLO1Q3E784 85 aa1.69□□□□□ -2.14
PTI1YGR156W YLR099W-AQ3E798 87 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms