RNA–Protein interactions for RNA: YGL021W

ALK1, Transcript of Protein kinase, yeast

Gene ALK1, Length 2,283 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ALK1	YGL021W	MSL1	P40567	111 aa	Predicted RBP	0.72	□□□□□ -2.29
ALK1	YGL021W	MVB12	P42939	101 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	COX12	Q01519	83 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	HUG1	Q6Q5K6	68 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	SUS1	Q6WNK7	96 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	RSF2	P46974	1380 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	MRP17	P28778	131 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	LCL2	Q08045	131 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	COX19	Q3E731	98 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	DNA2	P38859	1522 aa		0.72	□□□□□ -2.29
ALK1	YGL021W	TY4B-J	P47024	1803 aa		0.71	□□□□□ -2.3
ALK1	YGL021W	TY1B-H	O13535	1793 aa		0.71	□□□□□ -2.3
ALK1	YGL021W	IMP2	P46972	177 aa		0.71	□□□□□ -2.3
ALK1	YGL021W	YCR075W-A	Q3E830	75 aa		0.71	□□□□□ -2.3
ALK1	YGL021W	SNA2	P56508	79 aa		0.71	□□□□□ -2.3
ALK1	YGL021W	BPT1	P14772	1559 aa		0.7	□□□□□ -2.3
ALK1	YGL021W	HMRA1	P0CY11	126 aa		0.7	□□□□□ -2.3
ALK1	YGL021W	RSM18	P40033	138 aa		0.7	□□□□□ -2.3
ALK1	YGL021W	YMR141C	P40211	102 aa		0.7	□□□□□ -2.3
ALK1	YGL021W	YDR029W	Q12111	104 aa		0.7	□□□□□ -2.3
ALK1	YGL021W	YCR095W-A	Q3E787	52 aa		0.7	□□□□□ -2.3
ALK1	YGL021W	SRB8	P25648	1427 aa		0.7	□□□□□ -2.3
ALK1	YGL021W	ROX3	P25046	220 aa		0.69	□□□□□ -2.3
ALK1	YGL021W	HHY1	P39982	102 aa		0.69	□□□□□ -2.3
ALK1	YGL021W	SNU13	P39990	126 aa	Known RBP	0.69	□□□□□ -2.3
ALK1	YGL021W	AIM19	P40502	157 aa		0.69	□□□□□ -2.3
ALK1	YGL021W	YJR128W	P47162	119 aa		0.69	□□□□□ -2.3
ALK1	YGL021W	YPL038W-A	Q3E7B4	63 aa		0.69	□□□□□ -2.3
ALK1	YGL021W	ECM12	O13529	151 aa		0.69	□□□□□ -2.3
ALK1	YGL021W	RPL37A	P49166	88 aa	Known RBP	0.69	□□□□□ -2.3
ALK1	YGL021W	LTE1	P07866	1435 aa		0.69	□□□□□ -2.3
ALK1	YGL021W	PDX3	P38075	228 aa	Known RBP	0.68	□□□□□ -2.3
ALK1	YGL021W	YIL086C	P40503	102 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	YRF1-3	P0CX14	1859 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	YRF1-7	P0CX15	1859 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	GSC2	P40989	1895 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	YBR292C	P38357	123 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	PAU5	P43575	122 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	YDR042C	Q03205	200 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	MHF2	Q3E829	80 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	SSN2	P38931	1420 aa		0.68	□□□□□ -2.3
ALK1	YGL021W	MRPS12	P53732	153 aa		0.67	□□□□□ -2.3
ALK1	YGL021W	YMR082C	Q04276	118 aa		0.67	□□□□□ -2.3
ALK1	YGL021W	YKL068W-A	Q3E826	78 aa		0.67	□□□□□ -2.3
ALK1	YGL021W	SHU1	P38751	150 aa		0.67	□□□□□ -2.3
ALK1	YGL021W	MPC2	P38857	129 aa		0.67	□□□□□ -2.3
ALK1	YGL021W	LCL1	Q02786	101 aa		0.67	□□□□□ -2.3
ALK1	YGL021W	YDR210W	Q03482	75 aa		0.67	□□□□□ -2.3
ALK1	YGL021W	YBR072C-A	Q3E794	53 aa		0.67	□□□□□ -2.3
ALK1	YGL021W	PDR10	P51533	1564 aa		0.66	□□□□□ -2.3
ALK1	YGL021W	BNI1	P41832	1953 aa		0.66	□□□□□ -2.3
ALK1	YGL021W	YLR255C	O13574	117 aa		0.66	□□□□□ -2.3
ALK1	YGL021W	RPL37B	P51402	88 aa	Known RBP	0.66	□□□□□ -2.3
ALK1	YGL021W	MRX7	P53869	86 aa		0.66	□□□□□ -2.3
ALK1	YGL021W	NHP2	P32495	156 aa	Predicted RBP	0.66	□□□□□ -2.3
ALK1	YGL021W	ICY1	Q04329	127 aa		0.66	□□□□□ -2.3
ALK1	YGL021W	PAU20	Q08322	120 aa		0.66	□□□□□ -2.3
ALK1	YGL021W	YOR034C-A	Q3E735	80 aa		0.66	□□□□□ -2.3
ALK1	YGL021W	YRF1-6	P53819	1859 aa		0.66	□□□□□ -2.3
ALK1	YGL021W	NTE1	Q04958	1679 aa		0.65	□□□□□ -2.3
ALK1	YGL021W	PAU1	P0CE88	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	PAU14	P0CE89	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	PAU6	P0CE90	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	PAU18	P0CE91	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	PAU8	P0CE92	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	PAU11	P0CE93	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	PAU13	P38725	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	PAU10	Q03050	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	PAU9	Q3E770	120 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	SWR1	Q05471	1514 aa		0.65	□□□□□ -2.31
ALK1	YGL021W	MRPL38	P35996	138 aa	Predicted RBP	0.64	□□□□□ -2.31
ALK1	YGL021W	SCP1	Q08873	200 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	YGL194C-A	Q2V2P6	80 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	SLH1	P53327	1967 aa	Known RBP	0.64	□□□□□ -2.31
ALK1	YGL021W	BRR2	P32639	2163 aa	Known RBP	0.64	□□□□□ -2.31
ALK1	YGL021W	RPL43A	P0CX25	92 aa	Known RBP	0.64	□□□□□ -2.31
ALK1	YGL021W	RPL43B	P0CX26	92 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	YBL071C	P38185	102 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	PAU4	P53427	120 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	BSC4	P53841	131 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	YDR010C	Q12426	110 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	RRT15	Q3E811	62 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	GDB1	Q06625	1536 aa		0.64	□□□□□ -2.31
ALK1	YGL021W	RPA190	P10964	1664 aa	Known RBP	0.64	□□□□□ -2.31
ALK1	YGL021W	RPA12	P32529	125 aa	Known RBP	0.63	□□□□□ -2.31
ALK1	YGL021W	RPS11A	P0CX47	156 aa	Known RBP	0.63	□□□□□ -2.31
ALK1	YGL021W	RPS11B	P0CX48	156 aa	Known RBP	0.63	□□□□□ -2.31
ALK1	YGL021W	SPC1	P46965	94 aa		0.63	□□□□□ -2.31
ALK1	YGL021W	YOR343C	Q12484	108 aa		0.63	□□□□□ -2.31
ALK1	YGL021W	YMR175W-A	Q3E766	64 aa		0.63	□□□□□ -2.31
ALK1	YGL021W	YNR034W-A	Q3E841	98 aa		0.63	□□□□□ -2.31
ALK1	YGL021W	LAA1	P39526	2014 aa		0.62	□□□□□ -2.31
ALK1	YGL021W	YHR173C	P38864	112 aa		0.62	□□□□□ -2.31
ALK1	YGL021W	YKL065W-A	Q2V2P2	73 aa		0.62	□□□□□ -2.31
ALK1	YGL021W	YCR085W	P25650	117 aa		0.62	□□□□□ -2.31
ALK1	YGL021W	SEC16	P48415	2195 aa	Known RBP	0.61	□□□□□ -2.31
ALK1	YGL021W	TOM6	P33448	61 aa		0.61	□□□□□ -2.31
ALK1	YGL021W	YLR307C-A	Q3E825	87 aa		0.61	□□□□□ -2.31
ALK1	YGL021W	SEC7	P11075	2009 aa	Known RBP	0.61	□□□□□ -2.31
ALK1	YGL021W	YSP2	Q06681	1438 aa		0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 693.8 ms