RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C HUG1Q6Q5K6 68 aa1.92□□□□□ -2.1
SPB4YFL002C HFA1P32874 2273 aa1.92□□□□□ -2.1
SPB4YFL002C PAU5P43575 122 aa1.91□□□□□ -2.1
SPB4YFL002C MRPS12P53732 153 aa1.91□□□□□ -2.1
SPB4YFL002C YOL118CQ08259 102 aa1.91□□□□□ -2.1
SPB4YFL002C YDR029WQ12111 104 aa1.91□□□□□ -2.1
SPB4YFL002C RSF2P46974 1380 aa1.9□□□□□ -2.1
SPB4YFL002C HHY1P39982 102 aa1.9□□□□□ -2.11
SPB4YFL002C RRT15Q3E811 62 aa1.9□□□□□ -2.11
SPB4YFL002C YCR095W-AQ3E787 52 aa1.89□□□□□ -2.11
SPB4YFL002C YPK9Q12697 1472 aa1.88□□□□□ -2.11
SPB4YFL002C YHL005CP38752 130 aa1.88□□□□□ -2.11
SPB4YFL002C YRF1-3P0CX14 1859 aa1.88□□□□□ -2.11
SPB4YFL002C YRF1-7P0CX15 1859 aa1.88□□□□□ -2.11
SPB4YFL002C YRF1-6P53819 1859 aa1.88□□□□□ -2.11
SPB4YFL002C SLH1P53327 1967 aaKnown RBP1.88□□□□□ -2.11
SPB4YFL002C ROX3P25046 220 aa1.87□□□□□ -2.11
SPB4YFL002C CCW14O13547 238 aa1.87□□□□□ -2.11
SPB4YFL002C IMP2P46972 177 aa1.87□□□□□ -2.11
SPB4YFL002C LCL1Q02786 101 aa1.87□□□□□ -2.11
SPB4YFL002C YHR213W-BQ8TGK1 99 aa1.87□□□□□ -2.11
SPB4YFL002C GCV3P39726 170 aaPredicted RBP1.86□□□□□ -2.11
SPB4YFL002C YGL194C-AQ2V2P6 80 aa1.86□□□□□ -2.11
SPB4YFL002C SNU13P39990 126 aaKnown RBP1.84□□□□□ -2.11
SPB4YFL002C SNA2P56508 79 aa1.84□□□□□ -2.11
SPB4YFL002C SCP1Q08873 200 aa1.84□□□□□ -2.11
SPB4YFL002C SUS1Q6WNK7 96 aa1.84□□□□□ -2.11
SPB4YFL002C SSN2P38931 1420 aa1.83□□□□□ -2.12
SPB4YFL002C BNI1P41832 1953 aa1.83□□□□□ -2.12
SPB4YFL002C YPL038W-AQ3E7B4 63 aa1.83□□□□□ -2.12
SPB4YFL002C YMR141CP40211 102 aa1.82□□□□□ -2.12
SPB4YFL002C RPL37AP49166 88 aaKnown RBP1.82□□□□□ -2.12
SPB4YFL002C YDR042CQ03205 200 aa1.82□□□□□ -2.12
SPB4YFL002C ECM12O13529 151 aa1.82□□□□□ -2.12
SPB4YFL002C YJR128WP47162 119 aa1.82□□□□□ -2.12
SPB4YFL002C RSM18P40033 138 aa1.81□□□□□ -2.12
SPB4YFL002C YDR210WQ03482 75 aa1.81□□□□□ -2.12
SPB4YFL002C PAU6P0CE90 120 aa1.8□□□□□ -2.12
SPB4YFL002C PAU18P0CE91 120 aa1.8□□□□□ -2.12
SPB4YFL002C YMR082CQ04276 118 aa1.8□□□□□ -2.12
SPB4YFL002C COX12Q01519 83 aa1.8□□□□□ -2.12
SPB4YFL002C PDR10P51533 1564 aa1.79□□□□□ -2.12
SPB4YFL002C YLR255CO13574 117 aa1.79□□□□□ -2.12
SPB4YFL002C NHP10Q03435 203 aa1.79□□□□□ -2.12
SPB4YFL002C SPC1P46965 94 aa1.78□□□□□ -2.12
SPB4YFL002C SRB8P25648 1427 aa1.78□□□□□ -2.13
SPB4YFL002C MRP17P28778 131 aa1.77□□□□□ -2.13
SPB4YFL002C MRPL38P35996 138 aaPredicted RBP1.77□□□□□ -2.13
SPB4YFL002C YBL071CP38185 102 aa1.77□□□□□ -2.13
SPB4YFL002C ICY1Q04329 127 aa1.77□□□□□ -2.13
SPB4YFL002C BPT1P14772 1559 aa1.76□□□□□ -2.13
SPB4YFL002C RPA190P10964 1664 aaKnown RBP1.75□□□□□ -2.13
SPB4YFL002C LTE1P07866 1435 aa1.75□□□□□ -2.13
SPB4YFL002C YIL086CP40503 102 aa1.75□□□□□ -2.13
SPB4YFL002C MRX7P53869 86 aa1.75□□□□□ -2.13
SPB4YFL002C YOR034C-AQ3E735 80 aa1.75□□□□□ -2.13
SPB4YFL002C YNR034W-AQ3E841 98 aa1.75□□□□□ -2.13
SPB4YFL002C LAA1P39526 2014 aa1.74□□□□□ -2.13
SPB4YFL002C SHU1P38751 150 aa1.74□□□□□ -2.13
SPB4YFL002C MHF2Q3E829 80 aa1.73□□□□□ -2.13
SPB4YFL002C MYO1P08964 1928 aa1.73□□□□□ -2.13
SPB4YFL002C SEC7P11075 2009 aaKnown RBP1.73□□□□□ -2.13
SPB4YFL002C MPC2P38857 129 aa1.72□□□□□ -2.13
SPB4YFL002C AIM19P40502 157 aa1.72□□□□□ -2.13
SPB4YFL002C PAU20Q08322 120 aa1.72□□□□□ -2.13
SPB4YFL002C PAU1P0CE88 120 aa1.71□□□□□ -2.14
SPB4YFL002C PAU14P0CE89 120 aa1.71□□□□□ -2.14
SPB4YFL002C PAU8P0CE92 120 aa1.71□□□□□ -2.14
SPB4YFL002C PAU11P0CE93 120 aa1.71□□□□□ -2.14
SPB4YFL002C PAU13P38725 120 aa1.71□□□□□ -2.14
SPB4YFL002C PAU10Q03050 120 aa1.71□□□□□ -2.14
SPB4YFL002C COX19Q3E731 98 aa1.71□□□□□ -2.14
SPB4YFL002C PAU9Q3E770 120 aa1.71□□□□□ -2.14
SPB4YFL002C SEC16P48415 2195 aaKnown RBP1.71□□□□□ -2.14
SPB4YFL002C NHP2P32495 156 aaPredicted RBP1.7□□□□□ -2.14
SPB4YFL002C PAU4P53427 120 aa1.7□□□□□ -2.14
SPB4YFL002C URB1P34241 1764 aaKnown RBP1.7□□□□□ -2.14
SPB4YFL002C SWR1Q05471 1514 aa1.69□□□□□ -2.14
SPB4YFL002C GDB1Q06625 1536 aa1.69□□□□□ -2.14
SPB4YFL002C BRR2P32639 2163 aaKnown RBP1.69□□□□□ -2.14
SPB4YFL002C RPL43AP0CX25 92 aaKnown RBP1.69□□□□□ -2.14
SPB4YFL002C RPL43BP0CX26 92 aa1.69□□□□□ -2.14
SPB4YFL002C YSP2Q06681 1438 aa1.68□□□□□ -2.14
SPB4YFL002C RPL37BP51402 88 aaKnown RBP1.68□□□□□ -2.14
SPB4YFL002C YMR175W-AQ3E766 64 aa1.68□□□□□ -2.14
SPB4YFL002C RPS11AP0CX47 156 aaKnown RBP1.67□□□□□ -2.14
SPB4YFL002C RPS11BP0CX48 156 aaKnown RBP1.67□□□□□ -2.14
SPB4YFL002C YBR292CP38357 123 aa1.67□□□□□ -2.14
SPB4YFL002C CWP2P43497 92 aa1.66□□□□□ -2.14
SPB4YFL002C POL1P13382 1468 aa1.66□□□□□ -2.14
SPB4YFL002C YKL068W-AQ3E826 78 aa1.65□□□□□ -2.15
SPB4YFL002C ESC1Q03661 1658 aaKnown RBP1.64□□□□□ -2.15
SPB4YFL002C URA2P07259 2214 aaKnown RBP1.64□□□□□ -2.15
SPB4YFL002C AUA1P32450 94 aa1.63□□□□□ -2.15
SPB4YFL002C BSC4P53841 131 aa1.63□□□□□ -2.15
SPB4YFL002C YBR072C-AQ3E794 53 aa1.63□□□□□ -2.15
SPB4YFL002C YLR307C-AQ3E825 87 aa1.63□□□□□ -2.15
SPB4YFL002C NTE1Q04958 1679 aa1.63□□□□□ -2.15
SPB4YFL002C YHR173CP38864 112 aa1.63□□□□□ -2.15
SPB4YFL002C YCR085WP25650 117 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms