RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C HAL1Q01766 294 aa5.73□□□□□ -1.49
PUP3YER094C YMR103CQ04436 120 aa5.73□□□□□ -1.49
PUP3YER094C SCW10Q04951 389 aa5.73□□□□□ -1.49
PUP3YER094C FYV7Q12247 151 aa5.73□□□□□ -1.49
PUP3YER094C ADH2P00331 348 aaKnown RBP5.72□□□□□ -1.49
PUP3YER094C SCM4P32564 187 aa5.72□□□□□ -1.49
PUP3YER094C AIM29P36154 155 aa5.72□□□□□ -1.49
PUP3YER094C HAC1P41546 238 aa5.72□□□□□ -1.49
PUP3YER094C YJR146WP47174 117 aa5.72□□□□□ -1.49
PUP3YER094C YGL088WP53151 121 aa5.72□□□□□ -1.49
PUP3YER094C CRC1Q12289 327 aa5.72□□□□□ -1.49
PUP3YER094C COA3Q3E7B2 85 aa5.72□□□□□ -1.49
PUP3YER094C UBC5P15732 148 aa5.71□□□□□ -1.5
PUP3YER094C MSL1P40567 111 aaPredicted RBP5.71□□□□□ -1.5
PUP3YER094C NAT5Q08689 176 aa5.71□□□□□ -1.5
PUP3YER094C YLR112WQ12130 139 aa5.71□□□□□ -1.5
PUP3YER094C SEC11P15367 167 aa5.7□□□□□ -1.5
PUP3YER094C MRPL44P19956 98 aa5.7□□□□□ -1.5
PUP3YER094C ARC15P40518 154 aaRIP-Chip data5.7□□□□□ -1.5not detected
PUP3YER094C YGL230CP53074 147 aa5.7□□□□□ -1.5
PUP3YER094C TRP1P00912 224 aa5.69□□□□□ -1.5
PUP3YER094C ERI1P62651 68 aaKnown RBP5.69□□□□□ -1.5
PUP3YER094C ATP5P09457 212 aa5.68□□□□□ -1.5
PUP3YER094C MRP49P32388 137 aa5.68□□□□□ -1.5
PUP3YER094C YKL070WP36087 169 aa5.68□□□□□ -1.5
PUP3YER094C YDL157CQ12082 118 aa5.68□□□□□ -1.5
PUP3YER094C YCL021W-AQ96VH3 125 aa5.68□□□□□ -1.5
PUP3YER094C RPL31AP0C2H8 113 aaKnown RBP5.67□□□□□ -1.5
PUP3YER094C YMR122W-AQ3E842 84 aa5.67□□□□□ -1.5
PUP3YER094C ATP15P21306 62 aa5.66□□□□□ -1.5
PUP3YER094C YEL008WP40001 126 aa5.66□□□□□ -1.5
PUP3YER094C YER085CP40058 173 aa5.66□□□□□ -1.5
PUP3YER094C BET5Q03630 159 aa5.66□□□□□ -1.5
PUP3YER094C YCR007CP25354 239 aa5.65□□□□□ -1.5
PUP3YER094C YKL044WP36092 106 aa5.65□□□□□ -1.5
PUP3YER094C RPL32P38061 130 aaKnown RBP5.65□□□□□ -1.5
PUP3YER094C AIM11P87275 137 aa5.65□□□□□ -1.5
PUP3YER094C SAE3P89114 91 aa5.65□□□□□ -1.5
PUP3YER094C YDL085C-AQ3E7B7 68 aaKnown RBP5.65□□□□□ -1.5
PUP3YER094C RPS8AP0CX39 200 aaKnown RBP5.64□□□□□ -1.51
PUP3YER094C RPS8BP0CX40 200 aaKnown RBP5.64□□□□□ -1.51
PUP3YER094C SPC1P46965 94 aa5.64□□□□□ -1.51
PUP3YER094C YPL261CQ08976 102 aa5.64□□□□□ -1.51
PUP3YER094C DFM1Q12743 341 aaKnown RBP5.64□□□□□ -1.51
PUP3YER094C YPL073CP40323 161 aa5.62□□□□□ -1.51
PUP3YER094C YPR010C-AA5Z2X5 72 aa5.61□□□□□ -1.51
PUP3YER094C YAR029WP39549 74 aa5.61□□□□□ -1.51
PUP3YER094C RPL18AP0CX49 186 aaKnown RBP5.6□□□□□ -1.51
PUP3YER094C RPL18BP0CX50 186 aaKnown RBP5.6□□□□□ -1.51
PUP3YER094C YKR041WP36134 250 aa5.6□□□□□ -1.51
PUP3YER094C RPR2P40571 144 aa5.6□□□□□ -1.51
PUP3YER094C GLC8P41818 229 aa5.6□□□□□ -1.51
PUP3YER094C PAU23Q07987 124 aa5.6□□□□□ -1.51
PUP3YER094C PAU17Q12370 124 aa5.6□□□□□ -1.51
PUP3YER094C YDL022C-AP0C5L6 82 aa5.59□□□□□ -1.51
PUP3YER094C RPF1P38805 295 aaKnown RBP5.59□□□□□ -1.51
PUP3YER094C YLR194CQ05777 254 aa5.59□□□□□ -1.51
PUP3YER094C RPL33AP05744 107 aaKnown RBP5.58□□□□□ -1.52
PUP3YER094C YBR219CP38317 127 aa5.58□□□□□ -1.52
PUP3YER094C SHU1P38751 150 aa5.58□□□□□ -1.52
PUP3YER094C SVP26P38869 228 aa5.58□□□□□ -1.52
PUP3YER094C ERG28P40030 148 aa5.58□□□□□ -1.52
PUP3YER094C PEX17P40155 199 aa5.58□□□□□ -1.52
PUP3YER094C RPL33BP41056 107 aaKnown RBP5.58□□□□□ -1.52
PUP3YER094C PBA1Q05778 276 aa5.58□□□□□ -1.52
PUP3YER094C ENV10Q99382 181 aa5.58□□□□□ -1.52
PUP3YER094C YMR295CQ03559 197 aa5.57□□□□□ -1.52
PUP3YER094C YMR320WQ04897 101 aa5.57□□□□□ -1.52
PUP3YER094C DIF1O13577 133 aa5.56□□□□□ -1.52
PUP3YER094C YEL067CP39978 195 aa5.56□□□□□ -1.52
PUP3YER094C IGO2Q9P305 131 aa5.56□□□□□ -1.52
PUP3YER094C RTC6O14464 93 aa5.55□□□□□ -1.52
PUP3YER094C RPL28P02406 149 aaKnown RBP5.55□□□□□ -1.52
PUP3YER094C CIN5P40917 295 aa5.55□□□□□ -1.52
PUP3YER094C YML079WQ03629 201 aa5.55□□□□□ -1.52
PUP3YER094C PPT2Q12036 173 aa5.55□□□□□ -1.52
PUP3YER094C YLR363W-AQ3E747 85 aa5.55□□□□□ -1.52
PUP3YER094C YLL066W-BQ8TGJ7 56 aa5.55□□□□□ -1.52
PUP3YER094C RPL11AP0C0W9 174 aaKnown RBP5.54□□□□□ -1.52
PUP3YER094C HAP3P13434 144 aa5.54□□□□□ -1.52
PUP3YER094C CWC27Q02770 301 aa5.54□□□□□ -1.52
PUP3YER094C RPL11BQ3E757 174 aaPredicted RBP5.54□□□□□ -1.52
PUP3YER094C OXA1P39952 402 aa5.53□□□□□ -1.52
PUP3YER094C VTC1P40046 129 aaRIP-Chip data5.53□□□□□ -1.52not detected
PUP3YER094C YNR077CP53758 84 aa5.53□□□□□ -1.52
PUP3YER094C YDR115WQ04598 105 aa5.53□□□□□ -1.52
PUP3YER094C YMR175W-AQ3E766 64 aa5.53□□□□□ -1.52
PUP3YER094C QCR8P08525 94 aa5.52□□□□□ -1.53
PUP3YER094C ELC1Q03071 99 aa5.52□□□□□ -1.53
PUP3YER094C ADH1P00330 348 aaKnown RBP5.51□□□□□ -1.53
PUP3YER094C COX14P39103 70 aa5.51□□□□□ -1.53
PUP3YER094C YAL064WP39711 94 aa5.51□□□□□ -1.53
PUP3YER094C YFR057WP43625 151 aa5.51□□□□□ -1.53
PUP3YER094C RRT15Q3E811 62 aa5.51□□□□□ -1.53
PUP3YER094C RPC10P40422 70 aa5.5□□□□□ -1.53
PUP3YER094C MRPS12P53732 153 aa5.5□□□□□ -1.53
PUP3YER094C YNL190WP53872 204 aa5.5□□□□□ -1.53
PUP3YER094C UGX2P32772 223 aa5.49□□□□□ -1.53
PUP3YER094C TOA2P32774 122 aa5.49□□□□□ -1.53
PUP3YER094C MHR1Q06630 226 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms