RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W YDR366CP87287 132 aa1.67□□□□□ -2.14
PRE1YER012W PAU10Q03050 120 aa1.67□□□□□ -2.14
PRE1YER012W YMR320WQ04897 101 aa1.67□□□□□ -2.14
PRE1YER012W PAU20Q08322 120 aa1.67□□□□□ -2.14
PRE1YER012W DAD1Q12248 94 aa1.67□□□□□ -2.14
PRE1YER012W PAU9Q3E770 120 aa1.67□□□□□ -2.14
PRE1YER012W YCL001W-BQ96VH2 84 aa1.67□□□□□ -2.14
PRE1YER012W RTC6O14464 93 aa1.66□□□□□ -2.14
PRE1YER012W RPL28P02406 149 aaKnown RBP1.66□□□□□ -2.14
PRE1YER012W RPL26AP05743 127 aaKnown RBP1.66□□□□□ -2.14
PRE1YER012W YDR034C-AP0C289 58 aa1.66□□□□□ -2.14
PRE1YER012W DDR48P18899 430 aaKnown RBP1.66□□□□□ -2.14
PRE1YER012W YBR219CP38317 127 aa1.66□□□□□ -2.14
PRE1YER012W YBR292CP38357 123 aa1.66□□□□□ -2.14
PRE1YER012W YHR125WP38831 101 aa1.66□□□□□ -2.14
PRE1YER012W SVP26P38869 228 aa1.66□□□□□ -2.14
PRE1YER012W SPC1P46965 94 aa1.66□□□□□ -2.14
PRE1YER012W RPL26BP53221 127 aaKnown RBP1.66□□□□□ -2.14
PRE1YER012W PLP1Q04004 230 aa1.66□□□□□ -2.14
PRE1YER012W YLR194CQ05777 254 aa1.66□□□□□ -2.14
PRE1YER012W YPL257WQ08974 193 aa1.66□□□□□ -2.14
PRE1YER012W VMA9Q3E7B6 73 aa1.66□□□□□ -2.14
PRE1YER012W YCR075W-AQ3E830 75 aa1.66□□□□□ -2.14
PRE1YER012W HTL1Q9URQ5 78 aa1.66□□□□□ -2.14
PRE1YER012W TIR1P10863 254 aa1.65□□□□□ -2.15
PRE1YER012W ARC15P40518 154 aaRIP-Chip data1.65□□□□□ -2.15not detected
PRE1YER012W SNN1P48232 102 aa1.65□□□□□ -2.15
PRE1YER012W YGR026WP53217 278 aa1.65□□□□□ -2.15
PRE1YER012W ATP19P81451 68 aa1.65□□□□□ -2.15
PRE1YER012W NAT3Q06504 195 aa1.65□□□□□ -2.15
PRE1YER012W DCN1Q12395 269 aa1.65□□□□□ -2.15
PRE1YER012W YLR307C-AQ3E825 87 aa1.65□□□□□ -2.15
PRE1YER012W RPS22AP0C0W1 130 aaKnown RBP1.64□□□□□ -2.15
PRE1YER012W RPF1P38805 295 aaKnown RBP1.64□□□□□ -2.15
PRE1YER012W RPB11P38902 120 aa1.64□□□□□ -2.15
PRE1YER012W YAL064WP39711 94 aa1.64□□□□□ -2.15
PRE1YER012W GPI19Q04082 140 aa1.64□□□□□ -2.15
PRE1YER012W YAR023CD6VPM8 179 aa1.63□□□□□ -2.15
PRE1YER012W PRE1P22141 198 aaKnown RBP1.63□□□□□ -2.15
PRE1YER012W YHR140WP38842 239 aa1.63□□□□□ -2.15
PRE1YER012W CYB5P40312 120 aa1.63□□□□□ -2.15
PRE1YER012W PHS1P40857 217 aa1.63□□□□□ -2.15
PRE1YER012W DAD3P69850 94 aa1.63□□□□□ -2.15
PRE1YER012W YOR105WQ08504 108 aa1.63□□□□□ -2.15
PRE1YER012W YOR020W-AQ3E824 90 aa1.63□□□□□ -2.15
PRE1YER012W YMR122W-AQ3E842 84 aa1.63□□□□□ -2.15
PRE1YER012W YPR170W-BP0C5R9 85 aa1.62□□□□□ -2.15
PRE1YER012W YBR209WP38311 105 aa1.62□□□□□ -2.15
PRE1YER012W DCV1P43595 202 aa1.62□□□□□ -2.15
PRE1YER012W THG1P53215 237 aaKnown RBP1.62□□□□□ -2.15
PRE1YER012W UPS3Q04006 179 aa1.62□□□□□ -2.15
PRE1YER012W GIM5Q04493 163 aa1.62□□□□□ -2.15
PRE1YER012W FMP49A0A023PZB3 126 aa1.61□□□□□ -2.15
PRE1YER012W SCM4P32564 187 aa1.61□□□□□ -2.15
PRE1YER012W YEL008WP40001 126 aa1.61□□□□□ -2.15
PRE1YER012W MOG1P47123 218 aa1.61□□□□□ -2.15
PRE1YER012W PMP3P87284 55 aa1.61□□□□□ -2.15
PRE1YER012W YIL014C-AQ02598 104 aa1.61□□□□□ -2.15
PRE1YER012W FSF1Q12029 327 aaKnown RBP1.61□□□□□ -2.15
PRE1YER012W PCC1Q3E833 88 aa1.61□□□□□ -2.15
PRE1YER012W ADH3P07246 375 aaKnown RBP1.6□□□□□ -2.15
PRE1YER012W SEC4P07560 215 aaKnown RBP1.6□□□□□ -2.15
PRE1YER012W RPL27AP0C2H6 136 aaKnown RBP1.6□□□□□ -2.15
PRE1YER012W YJL197C-AP0C5P0 93 aa1.6□□□□□ -2.15
PRE1YER012W YGL010WP25338 174 aa1.6□□□□□ -2.15
PRE1YER012W MRP49P32388 137 aa1.6□□□□□ -2.15
PRE1YER012W YBR013CP38215 129 aa1.6□□□□□ -2.15
PRE1YER012W YDR010CQ12426 110 aa1.6□□□□□ -2.15
PRE1YER012W YNR034W-AQ3E841 98 aa1.6□□□□□ -2.15
PRE1YER012W APS1P35181 156 aa1.59□□□□□ -2.15
PRE1YER012W VMA7P39111 118 aa1.59□□□□□ -2.15
PRE1YER012W RPC10P40422 70 aa1.59□□□□□ -2.15
PRE1YER012W DAN1P47178 298 aa1.59□□□□□ -2.15
PRE1YER012W UBC12P52491 188 aa1.59□□□□□ -2.15
PRE1YER012W MMS2P53152 137 aa1.59□□□□□ -2.15
PRE1YER012W CGR1P53188 120 aa1.59□□□□□ -2.15
PRE1YER012W ABF2Q02486 183 aa1.59□□□□□ -2.15
PRE1YER012W YMR295CQ03559 197 aa1.59□□□□□ -2.15
PRE1YER012W TVP18Q04767 167 aa1.59□□□□□ -2.15
PRE1YER012W YDR029WQ12111 104 aa1.59□□□□□ -2.15
PRE1YER012W TDA8Q6B2U8 126 aa1.59□□□□□ -2.15
PRE1YER012W YDL022C-AP0C5L6 82 aa1.58□□□□□ -2.16
PRE1YER012W YER076CP40049 302 aa1.58□□□□□ -2.16
PRE1YER012W SNA2P56508 79 aa1.58□□□□□ -2.16
PRE1YER012W ERI1P62651 68 aaKnown RBP1.58□□□□□ -2.16
PRE1YER012W LCL1Q02786 101 aa1.58□□□□□ -2.16
PRE1YER012W YLR118CQ12354 227 aa1.58□□□□□ -2.16
PRE1YER012W EMC6Q12431 108 aa1.58□□□□□ -2.16
PRE1YER012W YPR014CQ6B0W2 109 aa1.58□□□□□ -2.16
PRE1YER012W YAL065CO13511 128 aa1.57□□□□□ -2.16
PRE1YER012W SHG1P38337 142 aa1.57□□□□□ -2.16
PRE1YER012W CIN5P40917 295 aa1.57□□□□□ -2.16
PRE1YER012W VMA21P41806 77 aa1.57□□□□□ -2.16
PRE1YER012W MGR2Q02889 113 aa1.57□□□□□ -2.16
PRE1YER012W LSO2Q3E772 92 aaKnown RBP1.57□□□□□ -2.16
PRE1YER012W POR1P04840 283 aaKnown RBP1.56□□□□□ -2.16
PRE1YER012W PFY1P07274 126 aa1.56□□□□□ -2.16
PRE1YER012W PAU19P0CE85 124 aa1.56□□□□□ -2.16
PRE1YER012W PAU21P0CE86 164 aa1.56□□□□□ -2.16
PRE1YER012W PAU22P0CE87 164 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms