RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W SOM1Q05676 74 aa0.9□□□□□ -2.27
RPN9YDR427W RAF1Q06891 181 aa0.9□□□□□ -2.27
RPN9YDR427W YOL131WQ08270 108 aa0.9□□□□□ -2.27
RPN9YDR427W TOR1P35169 2470 aa0.9□□□□□ -2.27
RPN9YDR427W TRA1P38811 3744 aa0.89□□□□□ -2.27
RPN9YDR427W GIM4P40005 111 aaKnown RBP0.89□□□□□ -2.27
RPN9YDR427W RGI1P40043 161 aaPredicted RBP0.89□□□□□ -2.27
RPN9YDR427W YNL019CP53975 284 aa0.89□□□□□ -2.27
RPN9YDR427W IRC21Q04772 201 aa0.89□□□□□ -2.27
RPN9YDR427W GTT2Q12390 233 aa0.89□□□□□ -2.27
RPN9YDR427W SEN1Q00416 2231 aaKnown RBP0.89□□□□□ -2.27
RPN9YDR427W PAM16P42949 149 aa0.88□□□□□ -2.27
RPN9YDR427W COF1Q03048 143 aaKnown RBP0.88□□□□□ -2.27
RPN9YDR427W NHP10Q03435 203 aa0.88□□□□□ -2.27
RPN9YDR427W SPC24Q04477 213 aa0.88□□□□□ -2.27
RPN9YDR427W NUM1Q00402 2748 aa0.87□□□□□ -2.27
RPN9YDR427W GCN1P33892 2672 aaKnown RBP0.87□□□□□ -2.27
RPN9YDR427W YSF3P0C074 85 aaPredicted RBP0.87□□□□□ -2.27
RPN9YDR427W MRPL44P19956 98 aa0.87□□□□□ -2.27
RPN9YDR427W LST8P41318 303 aa0.87□□□□□ -2.27
RPN9YDR427W YJL009WP47078 108 aa0.87□□□□□ -2.27
RPN9YDR427W SPC2Q04969 178 aa0.87□□□□□ -2.27
RPN9YDR427W NAT5Q08689 176 aa0.87□□□□□ -2.27
RPN9YDR427W YOR385WQ08909 290 aa0.87□□□□□ -2.27
RPN9YDR427W PRM3Q08931 133 aa0.87□□□□□ -2.27
RPN9YDR427W BLM10P43583 2143 aa0.86□□□□□ -2.27
RPN9YDR427W YMR141CP40211 102 aa0.86□□□□□ -2.27
RPN9YDR427W MIX14Q04341 121 aa0.86□□□□□ -2.27
RPN9YDR427W SPC3Q12133 184 aa0.86□□□□□ -2.27
RPN9YDR427W KTI11Q3E840 82 aa0.86□□□□□ -2.27
RPN9YDR427W MEC1P38111 2368 aa0.85□□□□□ -2.27
RPN9YDR427W ADK1P07170 222 aaKnown RBP0.85□□□□□ -2.27
RPN9YDR427W FUN14P18411 198 aa0.85□□□□□ -2.27
RPN9YDR427W ANB1P19211 157 aa0.85□□□□□ -2.27
RPN9YDR427W TIM12P32830 109 aa0.85□□□□□ -2.27
RPN9YDR427W YHR140WP38842 239 aa0.85□□□□□ -2.27
RPN9YDR427W MPC1P53157 130 aaKnown RBP0.85□□□□□ -2.27
RPN9YDR427W NCE101Q02820 53 aa0.85□□□□□ -2.27
RPN9YDR427W YOR343CQ12484 108 aa0.85□□□□□ -2.27
RPN9YDR427W MHF2Q3E829 80 aa0.85□□□□□ -2.27
RPN9YDR427W RPL43AP0CX25 92 aaKnown RBP0.84□□□□□ -2.27
RPN9YDR427W RPL43BP0CX26 92 aa0.84□□□□□ -2.27
RPN9YDR427W SFT2P38166 215 aa0.84□□□□□ -2.27
RPN9YDR427W YPL067CQ02754 198 aa0.84□□□□□ -2.27
RPN9YDR427W COA4Q05809 96 aa0.84□□□□□ -2.27
RPN9YDR427W BPH1P25356 2167 aa0.84□□□□□ -2.28
RPN9YDR427W YHR213WP0CI67 198 aa0.83□□□□□ -2.28
RPN9YDR427W MVB12P42939 101 aa0.83□□□□□ -2.28
RPN9YDR427W RPS12P48589 143 aaKnown RBP0.83□□□□□ -2.28
RPN9YDR427W YOL118CQ08259 102 aa0.83□□□□□ -2.28
RPN9YDR427W ATP14Q12349 124 aa0.83□□□□□ -2.28
RPN9YDR427W COA6Q3E846 104 aa0.83□□□□□ -2.28
RPN9YDR427W Q0144Q9ZZW2 109 aa0.83□□□□□ -2.28
RPN9YDR427W PFY1P07274 126 aa0.82□□□□□ -2.28
RPN9YDR427W YFR010W-AP0C5N0 62 aa0.82□□□□□ -2.28
RPN9YDR427W YHR214C-DP0CX93 97 aa0.82□□□□□ -2.28
RPN9YDR427W UTP11P34247 250 aaPredicted RBP0.82□□□□□ -2.28
RPN9YDR427W RPS20P38701 121 aaKnown RBP0.82□□□□□ -2.28
RPN9YDR427W YGL149WP53116 101 aa0.82□□□□□ -2.28
RPN9YDR427W YGR042WP53227 271 aa0.82□□□□□ -2.28
RPN9YDR427W PAU12P53343 120 aa0.82□□□□□ -2.28
RPN9YDR427W YOR289WQ12012 251 aaPredicted RBP0.82□□□□□ -2.28
RPN9YDR427W YOR192C-CQ3E736 78 aa0.82□□□□□ -2.28
RPN9YDR427W YLR099W-AQ3E798 87 aa0.82□□□□□ -2.28
RPN9YDR427W MED11Q99278 115 aa0.82□□□□□ -2.28
RPN9YDR427W RPL39P04650 51 aa0.81□□□□□ -2.28
RPN9YDR427W HAP3P13434 144 aa0.81□□□□□ -2.28
RPN9YDR427W PAU2P32612 120 aa0.81□□□□□ -2.28
RPN9YDR427W PAU24P38155 120 aa0.81□□□□□ -2.28
RPN9YDR427W AIM4P38305 123 aaPredicted RBP0.81□□□□□ -2.28
RPN9YDR427W BRP1P53194 125 aa0.81□□□□□ -2.28
RPN9YDR427W YGR017WP53210 297 aa0.81□□□□□ -2.28
RPN9YDR427W ELC1Q03071 99 aa0.81□□□□□ -2.28
RPN9YDR427W FIT3Q08907 204 aa0.81□□□□□ -2.28
RPN9YDR427W Q0297Q9ZZV8 51 aa0.81□□□□□ -2.28
RPN9YDR427W UTP20P35194 2493 aaKnown RBP0.8□□□□□ -2.28
RPN9YDR427W COX9P07255 59 aa0.8□□□□□ -2.28
RPN9YDR427W MRPL11P36521 249 aaPredicted RBP0.8□□□□□ -2.28
RPN9YDR427W QCR10P37299 77 aa0.8□□□□□ -2.28
RPN9YDR427W SIP18P50263 79 aa0.8□□□□□ -2.28
RPN9YDR427W SDH7Q04401 133 aa0.8□□□□□ -2.28
RPN9YDR427W YCL048W-AQ2V2Q2 79 aa0.8□□□□□ -2.28
RPN9YDR427W SUS1Q6WNK7 96 aa0.8□□□□□ -2.28
RPN9YDR427W URA2P07259 2214 aaKnown RBP0.79□□□□□ -2.28
RPN9YDR427W HYM1P32464 399 aa0.79□□□□□ -2.28
RPN9YDR427W HSP10P38910 106 aa0.79□□□□□ -2.28
RPN9YDR427W YER137CP40083 148 aaKnown RBP0.79□□□□□ -2.28
RPN9YDR427W YGL204CP53089 101 aa0.79□□□□□ -2.28
RPN9YDR427W YNL277W-AQ3E7Z0 62 aa0.79□□□□□ -2.28
RPN9YDR427W HUG1Q6Q5K6 68 aa0.79□□□□□ -2.28
RPN9YDR427W YOR032W-AQ8TGS1 66 aa0.79□□□□□ -2.28
RPN9YDR427W YMR105W-AQ8TGS8 64 aa0.79□□□□□ -2.28
RPN9YDR427W MDN1Q12019 4910 aaKnown RBP0.79□□□□□ -2.28
RPN9YDR427W DYN1P36022 4092 aa0.79□□□□□ -2.28
RPN9YDR427W BUD23P25627 275 aaPredicted RBP0.78□□□□□ -2.28
RPN9YDR427W YCR050CP25630 102 aa0.78□□□□□ -2.28
RPN9YDR427W SUA7P29055 345 aaPredicted RBP0.78□□□□□ -2.28
RPN9YDR427W RPL14AP36105 138 aaKnown RBP0.78□□□□□ -2.28
RPN9YDR427W RPL14BP38754 138 aaKnown RBP0.78□□□□□ -2.28
RPN9YDR427W YGR025WP53216 100 aa0.78□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms