RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	TAO3	P40468	2376 aa		0.6	□□□□□ -2.31
NSE3	YDR288W	TY4B-H	P0C2J7	1802 aa		0.59	□□□□□ -2.31
NSE3	YDR288W	SKI3	P17883	1432 aa	Known RBP	0.59	□□□□□ -2.31
NSE3	YDR288W	GNA1	P43577	159 aa	Predicted RBP	0.59	□□□□□ -2.31
NSE3	YDR288W	RPA190	P10964	1664 aa	Known RBP	0.59	□□□□□ -2.32
NSE3	YDR288W	FAS2	P19097	1887 aa	Known RBP	0.58	□□□□□ -2.32
NSE3	YDR288W	MOT1	P32333	1867 aa		0.58	□□□□□ -2.32
NSE3	YDR288W	ECM29	P38737	1868 aa		0.58	□□□□□ -2.32
NSE3	YDR288W	VPS13	Q07878	3144 aa		0.58	□□□□□ -2.32
NSE3	YDR288W	PAU19	P0CE85	124 aa		0.58	□□□□□ -2.32
NSE3	YDR288W	PAU3	P25610	124 aa		0.58	□□□□□ -2.32
NSE3	YDR288W	GTT1	P40582	234 aa		0.58	□□□□□ -2.32
NSE3	YDR288W	YGR164W	P53291	111 aa		0.58	□□□□□ -2.32
NSE3	YDR288W	YMR090W	Q04304	227 aa	Known RBP	0.58	□□□□□ -2.32
NSE3	YDR288W	YLR365W	Q7LIF2	110 aa		0.58	□□□□□ -2.32
NSE3	YDR288W	KOG1	P38873	1557 aa		0.57	□□□□□ -2.32
NSE3	YDR288W	YER039C-A	P0CD97	72 aa		0.57	□□□□□ -2.32
NSE3	YDR288W	BUD23	P25627	275 aa	Predicted RBP	0.57	□□□□□ -2.32
NSE3	YDR288W	PAU24	P38155	120 aa		0.57	□□□□□ -2.32
NSE3	YDR288W	YHR138C	P38841	114 aa	Predicted RBP	0.57	□□□□□ -2.32
NSE3	YDR288W	PAU15	P40585	124 aa		0.57	□□□□□ -2.32
NSE3	YDR288W	SNA2	P56508	79 aa		0.57	□□□□□ -2.32
NSE3	YDR288W	SWC7	Q06707	132 aa		0.57	□□□□□ -2.32
NSE3	YDR288W	YCL001W-B	Q96VH2	84 aa		0.57	□□□□□ -2.32
NSE3	YDR288W	PDR11	P40550	1411 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	BRR2	P32639	2163 aa	Known RBP	0.56	□□□□□ -2.32
NSE3	YDR288W	PAU2	P32612	120 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	PAU16	P35994	123 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	EMC5	P40540	141 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	HUR1	P45820	110 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	YMR103C	Q04436	120 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	LSM6	Q06406	86 aa	Known RBP	0.56	□□□□□ -2.32
NSE3	YDR288W	YCL048W-A	Q2V2Q2	79 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	MHF2	Q3E829	80 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	KRE5	P22023	1365 aa		0.56	□□□□□ -2.32
NSE3	YDR288W	TOR2	P32600	2474 aa	Known RBP	0.56	□□□□□ -2.32
NSE3	YDR288W	ESC1	Q03661	1658 aa	Known RBP	0.56	□□□□□ -2.32
NSE3	YDR288W	CAT8	P39113	1433 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	TSC11	P40061	1430 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	BUD4	P47136	1447 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	IRA2	P19158	3079 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	YCR101C	P25607	182 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	YBR090C	P38253	122 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	YHR173C	P38864	112 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	MSL1	P40567	111 aa	Predicted RBP	0.55	□□□□□ -2.32
NSE3	YDR288W	RSM19	P53733	91 aa	Predicted RBP	0.55	□□□□□ -2.32
NSE3	YDR288W	YOL118C	Q08259	102 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	YCR095W-A	Q3E787	52 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	YOS1	Q3E834	85 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	SUS1	Q6WNK7	96 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	LYS2	P07702	1392 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	BLM10	P43583	2143 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	TY1B-BR	Q12193	1756 aa		0.55	□□□□□ -2.32
NSE3	YDR288W	GEA2	P39993	1459 aa	Known RBP	0.54	□□□□□ -2.32
NSE3	YDR288W	REV3	P14284	1504 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	SNU13	P39990	126 aa	Known RBP	0.54	□□□□□ -2.32
NSE3	YDR288W	PAU20	Q08322	120 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	MIC10	Q96VH5	97 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-DR6	P0C2I3	1755 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-LR2	P0C2I5	1755 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-PR2	P0C2J0	1756 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-JR2	P47100	1755 aa	Known RBP	0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-MR1	Q04214	1755 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-MR2	Q04670	1755 aa	Known RBP	0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-NL1	Q12112	1755 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-GR1	Q12141	1755 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-GR3	Q12316	1755 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-PL	Q12414	1755 aa	Known RBP	0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-BL	Q12490	1755 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	TY1B-OR	Q92393	1755 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	RSF2	P46974	1380 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	SWR1	Q05471	1514 aa		0.54	□□□□□ -2.32
NSE3	YDR288W	YRF1-2	P40105	1681 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	NTE1	Q04958	1679 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	RIM15	P43565	1770 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU1	P0CE88	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU14	P0CE89	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU6	P0CE90	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU18	P0CE91	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU8	P0CE92	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU11	P0CE93	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	HMRA1	P0CY11	126 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	UBC4	P15731	148 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU13	P38725	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	GCV3	P39726	170 aa	Predicted RBP	0.53	□□□□□ -2.32
NSE3	YDR288W	IMP2	P46972	177 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU10	Q03050	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	YDR029W	Q12111	104 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	PAU9	Q3E770	120 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	YPL038W-A	Q3E7B4	63 aa		0.53	□□□□□ -2.32
NSE3	YDR288W	TOP2	P06786	1428 aa	Known RBP	0.53	□□□□□ -2.32
NSE3	YDR288W	GEA1	P47102	1408 aa	Predicted RBP	0.53	□□□□□ -2.32
NSE3	YDR288W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.52	□□□□□ -2.33
NSE3	YDR288W	TY2B-LR1	P0C2J3	1770 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	STT4	P37297	1900 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	UBC5	P15732	148 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	MRP17	P28778	131 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	YBL071C	P38185	102 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	PAU5	P43575	122 aa		0.52	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms