RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W SPT4P32914 102 aaPredicted RBP3.32□□□□□ -1.88
TRS85YDR108W UBC13P52490 153 aa3.32□□□□□ -1.88
TRS85YDR108W YOR387CQ08910 206 aa3.32□□□□□ -1.88
TRS85YDR108W YOR192C-CQ3E736 78 aa3.32□□□□□ -1.88
TRS85YDR108W MXR2P25566 168 aa3.32□□□□□ -1.88
TRS85YDR108W PIR5P46999 287 aa3.32□□□□□ -1.88
TRS85YDR108W YNL234WP53857 426 aa3.32□□□□□ -1.88
TRS85YDR108W YOR268CQ08734 132 aa3.32□□□□□ -1.88
TRS85YDR108W FIT2Q08906 153 aa3.32□□□□□ -1.88
TRS85YDR108W HMRA2P0CY13 119 aa3.31□□□□□ -1.88
TRS85YDR108W RPL16AP26784 199 aaKnown RBP3.31□□□□□ -1.88
TRS85YDR108W MED6P38782 295 aa3.31□□□□□ -1.88
TRS85YDR108W KEG1P43614 200 aa3.31□□□□□ -1.88
TRS85YDR108W YHP1Q04116 353 aa3.31□□□□□ -1.88
TRS85YDR108W SPO24Q3E752 67 aa3.31□□□□□ -1.88
TRS85YDR108W TDA8Q6B2U8 126 aa3.31□□□□□ -1.88
TRS85YDR108W RPS14AP06367 137 aaKnown RBP3.31□□□□□ -1.88
TRS85YDR108W YHR213WP0CI67 198 aa3.31□□□□□ -1.88
TRS85YDR108W ATP23P53722 227 aa3.31□□□□□ -1.88
TRS85YDR108W SMD1Q02260 146 aaPredicted RBP3.31□□□□□ -1.88
TRS85YDR108W ICY1Q04329 127 aa3.31□□□□□ -1.88
TRS85YDR108W PBP4Q07362 185 aaKnown RBP3.31□□□□□ -1.88
TRS85YDR108W ARF2P19146 181 aaKnown RBP3.3□□□□□ -1.88
TRS85YDR108W MGR2Q02889 113 aa3.3□□□□□ -1.88
TRS85YDR108W PPT2Q12036 173 aa3.3□□□□□ -1.88
TRS85YDR108W YOR343CQ12484 108 aa3.3□□□□□ -1.88
TRS85YDR108W YOR376W-AQ3E805 51 aa3.3□□□□□ -1.88
TRS85YDR108W PEX17P40155 199 aa3.29□□□□□ -1.88
TRS85YDR108W YML122CQ03207 126 aa3.29□□□□□ -1.88
TRS85YDR108W YLR194CQ05777 254 aa3.29□□□□□ -1.88
TRS85YDR108W YDR246W-AQ3E763 66 aa3.29□□□□□ -1.88
TRS85YDR108W CDC39P25655 2108 aaKnown RBP3.29□□□□□ -1.88
TRS85YDR108W MTC6P38849 526 aa3.29□□□□□ -1.88
TRS85YDR108W RPL15BP54780 204 aaPredicted RBP3.29□□□□□ -1.88
TRS85YDR108W DAD4P69851 72 aa3.29□□□□□ -1.88
TRS85YDR108W COA3Q3E7B2 85 aa3.29□□□□□ -1.88
TRS85YDR108W YHR214C-DP0CX93 97 aa3.28□□□□□ -1.88
TRS85YDR108W LDB16P25587 256 aa3.28□□□□□ -1.88
TRS85YDR108W YBR144CP34215 104 aa3.28□□□□□ -1.88
TRS85YDR108W MPC2P38857 129 aa3.28□□□□□ -1.88
TRS85YDR108W CTR2P38865 189 aa3.28□□□□□ -1.88
TRS85YDR108W ICS3P47034 131 aa3.28□□□□□ -1.88
TRS85YDR108W YMR181CQ03231 154 aa3.28□□□□□ -1.88
TRS85YDR108W YMR295CQ03559 197 aa3.28□□□□□ -1.88
TRS85YDR108W NAG1Q8TGN9 163 aa3.28□□□□□ -1.88
TRS85YDR108W CYR1P08678 2026 aaKnown RBP3.28□□□□□ -1.88
TRS85YDR108W SPS100P13130 326 aa3.28□□□□□ -1.89
TRS85YDR108W AGA1P32323 725 aa3.28□□□□□ -1.89
TRS85YDR108W AIM4P38305 123 aaPredicted RBP3.28□□□□□ -1.89
TRS85YDR108W PGU1P47180 361 aa3.28□□□□□ -1.89
TRS85YDR108W YGL258W-AQ3E740 77 aa3.28□□□□□ -1.89
TRS85YDR108W YLR285C-AQ3E771 56 aa3.28□□□□□ -1.89
TRS85YDR108W YMR141CP40211 102 aa3.27□□□□□ -1.89
TRS85YDR108W DCV1P43595 202 aa3.27□□□□□ -1.89
TRS85YDR108W YGL034CP53186 121 aa3.27□□□□□ -1.89
TRS85YDR108W ERI1P62651 68 aaKnown RBP3.27□□□□□ -1.89
TRS85YDR108W YHR022CP38763 256 aa3.26□□□□□ -1.89
TRS85YDR108W RSM18P40033 138 aa3.26□□□□□ -1.89
TRS85YDR108W NCE101Q02820 53 aa3.26□□□□□ -1.89
TRS85YDR108W PRM7Q12459 698 aa3.26□□□□□ -1.89
TRS85YDR108W YKR045CP36138 183 aa3.26□□□□□ -1.89
TRS85YDR108W SPI1P40092 148 aa3.26□□□□□ -1.89
TRS85YDR108W ECO1P43605 281 aa3.26□□□□□ -1.89
TRS85YDR108W TOS6P48560 102 aa3.26□□□□□ -1.89
TRS85YDR108W YNL190WP53872 204 aa3.26□□□□□ -1.89
TRS85YDR108W YDR274CP87283 123 aa3.26□□□□□ -1.89
TRS85YDR108W YLR111WQ12528 110 aa3.26□□□□□ -1.89
TRS85YDR108W RPB9P27999 122 aa3.25□□□□□ -1.89
TRS85YDR108W IRC19Q07843 230 aa3.25□□□□□ -1.89
TRS85YDR108W VPS68Q12016 184 aa3.25□□□□□ -1.89
TRS85YDR108W YDL009CQ12210 107 aa3.25□□□□□ -1.89
TRS85YDR108W YHR214C-EQ8TGK0 99 aa3.25□□□□□ -1.89
TRS85YDR108W YLR156WP0CE96 114 aa3.24□□□□□ -1.89
TRS85YDR108W YLR159WP0CE97 114 aa3.24□□□□□ -1.89
TRS85YDR108W YLR161WP0CE98 114 aa3.24□□□□□ -1.89
TRS85YDR108W MSA2P36157 363 aa3.24□□□□□ -1.89
TRS85YDR108W YFR035CP43608 114 aa3.24□□□□□ -1.89
TRS85YDR108W HUR1P45820 110 aa3.24□□□□□ -1.89
TRS85YDR108W YMR254CQ04838 102 aa3.24□□□□□ -1.89
TRS85YDR108W ATP20Q12233 115 aa3.24□□□□□ -1.89
TRS85YDR108W YOR381W-AQ3E804 55 aa3.24□□□□□ -1.89
TRS85YDR108W YAL065CO13511 128 aa3.24□□□□□ -1.89
TRS85YDR108W RPL26AP05743 127 aaKnown RBP3.24□□□□□ -1.89
TRS85YDR108W RPS14BP39516 138 aaKnown RBP3.24□□□□□ -1.89
TRS85YDR108W YIL029CP40538 142 aa3.24□□□□□ -1.89
TRS85YDR108W FHN1P53279 174 aa3.24□□□□□ -1.89
TRS85YDR108W MIG3P39943 394 aa3.23□□□□□ -1.89
TRS85YDR108W IMP2P46972 177 aa3.23□□□□□ -1.89
TRS85YDR108W TOS8P53147 276 aa3.23□□□□□ -1.89
TRS85YDR108W TDA2P40045 126 aa3.23□□□□□ -1.89
TRS85YDR108W HHF1P02309 103 aaKnown RBP3.22□□□□□ -1.89
TRS85YDR108W ATP15P21306 62 aa3.22□□□□□ -1.89
TRS85YDR108W EDC1P53080 175 aaPredicted RBP3.22□□□□□ -1.89
TRS85YDR108W YOR314WQ12506 109 aa3.22□□□□□ -1.89
TRS85YDR108W TSC3Q3E790 80 aa3.22□□□□□ -1.89
TRS85YDR108W YML100W-AQ8TGT0 57 aa3.22□□□□□ -1.89
TRS85YDR108W RPL26BP53221 127 aaKnown RBP3.21□□□□□ -1.89
TRS85YDR108W MRPS12P53732 153 aa3.21□□□□□ -1.89
TRS85YDR108W YLR162WQ06235 118 aa3.21□□□□□ -1.89
TRS85YDR108W CRC1Q12289 327 aa3.21□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms