RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	POP7	P38291	140 aa		0.88	□□□□□ -2.27
APM3	YBR288C	HUA1	P40325	198 aa		0.88	□□□□□ -2.27
APM3	YBR288C	SFT1	P43682	97 aa		0.88	□□□□□ -2.27
APM3	YBR288C	RPL37B	P51402	88 aa	Known RBP	0.88	□□□□□ -2.27
APM3	YBR288C	YGL230C	P53074	147 aa		0.88	□□□□□ -2.27
APM3	YBR288C	YNL019C	P53975	284 aa		0.88	□□□□□ -2.27
APM3	YBR288C	YCL048W-A	Q2V2Q2	79 aa		0.88	□□□□□ -2.27
APM3	YBR288C	YNL277W-A	Q3E7Z0	62 aa		0.88	□□□□□ -2.27
APM3	YBR288C	FMP49	A0A023PZB3	126 aa		0.87	□□□□□ -2.27
APM3	YBR288C	RPS1A	P33442	255 aa	Known RBP	0.87	□□□□□ -2.27
APM3	YBR288C	YAL064W	P39711	94 aa		0.87	□□□□□ -2.27
APM3	YBR288C	YFR035C	P43608	114 aa		0.87	□□□□□ -2.27
APM3	YBR288C	RPS12	P48589	143 aa	Known RBP	0.87	□□□□□ -2.27
APM3	YBR288C	DIE2	P50076	525 aa		0.87	□□□□□ -2.27
APM3	YBR288C	NHP10	Q03435	203 aa		0.87	□□□□□ -2.27
APM3	YBR288C	TVP18	Q04767	167 aa		0.87	□□□□□ -2.27
APM3	YBR288C	VAM10	Q08474	114 aa		0.87	□□□□□ -2.27
APM3	YBR288C	HUT1	Q12520	339 aa		0.87	□□□□□ -2.27
APM3	YBR288C	YJL197C-A	P0C5P0	93 aa		0.86	□□□□□ -2.27
APM3	YBR288C	NHP6A	P11632	93 aa	Known RBP	0.86	□□□□□ -2.27
APM3	YBR288C	ROX3	P25046	220 aa		0.86	□□□□□ -2.27
APM3	YBR288C	HYM1	P32464	399 aa		0.86	□□□□□ -2.27
APM3	YBR288C	QCR10	P37299	77 aa		0.86	□□□□□ -2.27
APM3	YBR288C	GAT4	P40569	121 aa		0.86	□□□□□ -2.27
APM3	YBR288C	ATP19	P81451	68 aa		0.86	□□□□□ -2.27
APM3	YBR288C	FIT3	Q08907	204 aa		0.86	□□□□□ -2.27
APM3	YBR288C	RTC6	O14464	93 aa		0.86	□□□□□ -2.27
APM3	YBR288C	PHS1	P40857	217 aa		0.86	□□□□□ -2.27
APM3	YBR288C	BRP1	P53194	125 aa		0.86	□□□□□ -2.27
APM3	YBR288C	DYN2	Q02647	92 aa		0.86	□□□□□ -2.27
APM3	YBR288C	SDH7	Q04401	133 aa		0.86	□□□□□ -2.27
APM3	YBR288C	PRE1	P22141	198 aa	Known RBP	0.85	□□□□□ -2.27
APM3	YBR288C	ECM31	P38122	312 aa		0.85	□□□□□ -2.27
APM3	YBR288C	ATG8	P38182	117 aa	RIP-Chip data	0.85	□□□□□ -2.27	not detected
APM3	YBR288C	DCV1	P43595	202 aa		0.85	□□□□□ -2.27
APM3	YBR288C	LSM8	P47093	109 aa	Known RBP	0.85	□□□□□ -2.27
APM3	YBR288C	SPG1	P50088	95 aa		0.85	□□□□□ -2.27
APM3	YBR288C	YGL014C-A	P0C5N1	53 aa		0.84	□□□□□ -2.28
APM3	YBR288C	NMT1	P14743	455 aa		0.84	□□□□□ -2.28
APM3	YBR288C	RPC19	P28000	142 aa	Known RBP	0.84	□□□□□ -2.28
APM3	YBR288C	ELC1	Q03071	99 aa		0.84	□□□□□ -2.28
APM3	YBR288C	RPL39	P04650	51 aa		0.83	□□□□□ -2.28
APM3	YBR288C	FUN14	P18411	198 aa		0.83	□□□□□ -2.28
APM3	YBR288C	YGR017W	P53210	297 aa		0.83	□□□□□ -2.28
APM3	YBR288C	SEN15	Q04675	128 aa		0.83	□□□□□ -2.28
APM3	YBR288C	CNL1	Q06333	122 aa		0.83	□□□□□ -2.28
APM3	YBR288C	PRM3	Q08931	133 aa		0.83	□□□□□ -2.28
APM3	YBR288C	YOR376W-A	Q3E805	51 aa		0.83	□□□□□ -2.28
APM3	YBR288C	RPL33A	P05744	107 aa	Known RBP	0.82	□□□□□ -2.28
APM3	YBR288C	HYP2	P23301	157 aa	Known RBP	0.82	□□□□□ -2.28
APM3	YBR288C	SRL3	P36167	246 aa		0.82	□□□□□ -2.28
APM3	YBR288C	SFT2	P38166	215 aa		0.82	□□□□□ -2.28
APM3	YBR288C	AIM4	P38305	123 aa	Predicted RBP	0.82	□□□□□ -2.28
APM3	YBR288C	YAR064W	P39563	99 aa		0.82	□□□□□ -2.28
APM3	YBR288C	LST8	P41318	303 aa		0.82	□□□□□ -2.28
APM3	YBR288C	RPL22B	P56628	122 aa	Known RBP	0.82	□□□□□ -2.28
APM3	YBR288C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.81	□□□□□ -2.28
APM3	YBR288C	YCR001W	P25347	104 aa		0.81	□□□□□ -2.28
APM3	YBR288C	MPC2	P38857	129 aa		0.81	□□□□□ -2.28
APM3	YBR288C	YPL067C	Q02754	198 aa		0.81	□□□□□ -2.28
APM3	YBR288C	YMR122C	Q03879	124 aa		0.81	□□□□□ -2.28
APM3	YBR288C	HOR7	Q05827	59 aa		0.81	□□□□□ -2.28
APM3	YBR288C	NAT5	Q08689	176 aa		0.81	□□□□□ -2.28
APM3	YBR288C	CCW12	Q12127	133 aa		0.81	□□□□□ -2.28
APM3	YBR288C	YOR343C	Q12484	108 aa		0.81	□□□□□ -2.28
APM3	YBR288C	YHR213W	P0CI67	198 aa		0.8	□□□□□ -2.28
APM3	YBR288C	VPS55	P47111	140 aa		0.8	□□□□□ -2.28
APM3	YBR288C	YNL122C	P53921	115 aa	Predicted RBP	0.8	□□□□□ -2.28
APM3	YBR288C	YMR007W	Q03675	126 aa		0.8	□□□□□ -2.28
APM3	YBR288C	SLO1	Q3E784	85 aa		0.8	□□□□□ -2.28
APM3	YBR288C	PAU21	P0CE86	164 aa		0.8	□□□□□ -2.28
APM3	YBR288C	PAU22	P0CE87	164 aa		0.8	□□□□□ -2.28
APM3	YBR288C	MRPL44	P19956	98 aa		0.8	□□□□□ -2.28
APM3	YBR288C	MRP49	P32388	137 aa		0.8	□□□□□ -2.28
APM3	YBR288C	UGX2	P32772	223 aa		0.8	□□□□□ -2.28
APM3	YBR288C	YGL149W	P53116	101 aa		0.8	□□□□□ -2.28
APM3	YBR288C	YLR296W	Q05898	108 aa		0.8	□□□□□ -2.28
APM3	YBR288C	ATP14	Q12349	124 aa		0.8	□□□□□ -2.28
APM3	YBR288C	YLR099W-A	Q3E798	87 aa		0.8	□□□□□ -2.28
APM3	YBR288C	YMR105W-A	Q8TGS8	64 aa		0.8	□□□□□ -2.28
APM3	YBR288C	VMA10	P48836	114 aa	Known RBP	0.79	□□□□□ -2.28
APM3	YBR288C	LCL2	Q08045	131 aa		0.79	□□□□□ -2.28
APM3	YBR288C	YLR118C	Q12354	227 aa		0.79	□□□□□ -2.28
APM3	YBR288C	TIM12	P32830	109 aa		0.78	□□□□□ -2.28
APM3	YBR288C	COA4	Q05809	96 aa		0.78	□□□□□ -2.28
APM3	YBR288C	UTP11	P34247	250 aa	Predicted RBP	0.77	□□□□□ -2.29
APM3	YBR288C	MRPL11	P36521	249 aa	Predicted RBP	0.77	□□□□□ -2.29
APM3	YBR288C	COX12	Q01519	83 aa		0.77	□□□□□ -2.29
APM3	YBR288C	ANB1	P19211	157 aa		0.76	□□□□□ -2.29
APM3	YBR288C	SEC59	P20048	519 aa		0.76	□□□□□ -2.29
APM3	YBR288C	YKL044W	P36092	106 aa		0.76	□□□□□ -2.29
APM3	YBR288C	HSP10	P38910	106 aa		0.76	□□□□□ -2.29
APM3	YBR288C	SAE3	P89114	91 aa		0.76	□□□□□ -2.29
APM3	YBR288C	AIM36	Q03798	255 aa		0.76	□□□□□ -2.29
APM3	YBR288C	FRQ1	Q06389	190 aa		0.76	□□□□□ -2.29
APM3	YBR288C	WIP1	Q2V2P8	89 aa		0.76	□□□□□ -2.29
APM3	YBR288C	MHF2	Q3E829	80 aa		0.76	□□□□□ -2.29
APM3	YBR288C	VMA7	P39111	118 aa		0.75	□□□□□ -2.29
APM3	YBR288C	MPC1	P53157	130 aa	Known RBP	0.75	□□□□□ -2.29
APM3	YBR288C	ERV14	P53173	138 aa		0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms