RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	ERG27	Q12452	347 aa	Known RBP	2.81	□□□□□ -1.96
SAF1	YBR280C	VMA9	Q3E7B6	73 aa		2.81	□□□□□ -1.96
SAF1	YBR280C	YAL065C	O13511	128 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	PFY1	P07274	126 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	CDC43	P18898	376 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	APS1	P35181	156 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	HSP10	P38910	106 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	UBC12	P52491	188 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	FSF1	Q12029	327 aa	Known RBP	2.8	□□□□□ -1.96
SAF1	YBR280C	WIP1	Q2V2P8	89 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	YOR008C-A	Q3E7B9	74 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-LR4	P0C2I8	440 aa	Known RBP	2.8	□□□□□ -1.96
SAF1	YBR280C	AQY2	P0CD90	149 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	PAU19	P0CE85	124 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	PAU21	P0CE86	164 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	PAU22	P0CE87	164 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	YLR156W	P0CE96	114 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	YLR159W	P0CE97	114 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	YLR161W	P0CE98	114 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-DR6	P0CX70	440 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-ER1	P0CX71	440 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-LR2	P0CX72	440 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-PL	P0CX73	440 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-JR1	P0CX74	440 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-LR3	P0CX75	440 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-ML2	P0CX76	440 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	PAU3	P25610	124 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	LDS1	P31379	325 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	DAD2	P36162	133 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	PAU15	P40585	124 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	APS2	Q00381	147 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-GR1	Q12085	440 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	FMP16	Q12497	93 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	2.8	□□□□□ -1.96
SAF1	YBR280C	Q0032	Q9ZZX7	96 aa		2.8	□□□□□ -1.96
SAF1	YBR280C	PKR1	Q03880	122 aa	Known RBP	2.79	□□□□□ -1.96
SAF1	YBR280C	YDL241W	Q07738	123 aa		2.79	□□□□□ -1.96
SAF1	YBR280C	Q0142	Q9ZZW4	58 aa		2.79	□□□□□ -1.96
SAF1	YBR280C	POR1	P04840	283 aa	Known RBP	2.78	□□□□□ -1.96
SAF1	YBR280C	MGR2	Q02889	113 aa		2.78	□□□□□ -1.96
SAF1	YBR280C	YML108W	Q03759	105 aa		2.78	□□□□□ -1.96
SAF1	YBR280C	CMC4	Q3E7A9	73 aa		2.78	□□□□□ -1.96
SAF1	YBR280C	YPR014C	Q6B0W2	109 aa		2.78	□□□□□ -1.96
SAF1	YBR280C	AQY1	P0CD91	305 aa		2.78	□□□□□ -1.97
SAF1	YBR280C	PRE1	P22141	198 aa	Known RBP	2.78	□□□□□ -1.97
SAF1	YBR280C	URM1	P40554	99 aa	Predicted RBP	2.78	□□□□□ -1.97
SAF1	YBR280C	SMD1	Q02260	146 aa	Predicted RBP	2.78	□□□□□ -1.97
SAF1	YBR280C	UBC4	P15731	148 aa		2.77	□□□□□ -1.97
SAF1	YBR280C	NTF2	P33331	125 aa	Known RBP	2.77	□□□□□ -1.97
SAF1	YBR280C	YFL019C	P43576	117 aa		2.77	□□□□□ -1.97
SAF1	YBR280C	TOS6	P48560	102 aa		2.77	□□□□□ -1.97
SAF1	YBR280C	YOR268C	Q08734	132 aa		2.77	□□□□□ -1.97
SAF1	YBR280C	KTI11	Q3E840	82 aa		2.77	□□□□□ -1.97
SAF1	YBR280C	NHP6A	P11632	93 aa	Known RBP	2.76	□□□□□ -1.97
SAF1	YBR280C	OXA1	P39952	402 aa		2.76	□□□□□ -1.97
SAF1	YBR280C	ATP14	Q12349	124 aa		2.76	□□□□□ -1.97
SAF1	YBR280C	YOP1	Q12402	180 aa		2.76	□□□□□ -1.97
SAF1	YBR280C	STF1	P01098	86 aa		2.76	□□□□□ -1.97
SAF1	YBR280C	ADH3	P07246	375 aa	Known RBP	2.76	□□□□□ -1.97
SAF1	YBR280C	PCL2	P25693	308 aa		2.76	□□□□□ -1.97
SAF1	YBR280C	SRB6	P32570	121 aa		2.76	□□□□□ -1.97
SAF1	YBR280C	YIL014C-A	Q02598	104 aa		2.76	□□□□□ -1.97
SAF1	YBR280C	SEC4	P07560	215 aa	Known RBP	2.75	□□□□□ -1.97
SAF1	YBR280C	YGL193C	P53097	103 aa		2.75	□□□□□ -1.97
SAF1	YBR280C	RPL31A	P0C2H8	113 aa	Known RBP	2.74	□□□□□ -1.97
SAF1	YBR280C	HMRA2	P0CY13	119 aa		2.74	□□□□□ -1.97
SAF1	YBR280C	PAU16	P35994	123 aa		2.74	□□□□□ -1.97
SAF1	YBR280C	KNH1	P50112	268 aa		2.74	□□□□□ -1.97
SAF1	YBR280C	YDR042C	Q03205	200 aa		2.74	□□□□□ -1.97
SAF1	YBR280C	COX14	P39103	70 aa		2.74	□□□□□ -1.97
SAF1	YBR280C	IGD1	P43598	195 aa		2.74	□□□□□ -1.97
SAF1	YBR280C	ABF2	Q02486	183 aa		2.74	□□□□□ -1.97
SAF1	YBR280C	YCR024C-B	Q3E7Z8	88 aa		2.74	□□□□□ -1.97
SAF1	YBR280C	YBL039W-B	P0C268	59 aa		2.73	□□□□□ -1.97
SAF1	YBR280C	ATP15	P21306	62 aa		2.73	□□□□□ -1.97
SAF1	YBR280C	CNB1	P25296	175 aa		2.73	□□□□□ -1.97
SAF1	YBR280C	MVB12	P42939	101 aa		2.73	□□□□□ -1.97
SAF1	YBR280C	CMC2	Q3E7A4	109 aa		2.73	□□□□□ -1.97
SAF1	YBR280C	HHO1	P53551	258 aa		2.72	□□□□□ -1.97
SAF1	YBR280C	MED7	Q08278	222 aa		2.72	□□□□□ -1.97
SAF1	YBR280C	TOA2	P32774	122 aa		2.72	□□□□□ -1.97
SAF1	YBR280C	EDC2	P40023	145 aa	Predicted RBP	2.72	□□□□□ -1.97
SAF1	YBR280C	ERV14	P53173	138 aa		2.72	□□□□□ -1.97
SAF1	YBR280C	ATP16	Q12165	160 aa		2.72	□□□□□ -1.97
SAF1	YBR280C	COA3	Q3E7B2	85 aa		2.72	□□□□□ -1.97
SAF1	YBR280C	RPS22B	Q3E7Y3	130 aa	Known RBP	2.72	□□□□□ -1.97
SAF1	YBR280C	TIM11	P81449	96 aa	Predicted RBP	2.71	□□□□□ -1.98
SAF1	YBR280C	ZEO1	Q08245	113 aa		2.71	□□□□□ -1.98
SAF1	YBR280C	PPT2	Q12036	173 aa		2.71	□□□□□ -1.98
SAF1	YBR280C	SCM4	P32564	187 aa		2.7	□□□□□ -1.98
SAF1	YBR280C	SHU1	P38751	150 aa		2.7	□□□□□ -1.98
SAF1	YBR280C	KSH1	Q8TGJ3	72 aa		2.7	□□□□□ -1.98
SAF1	YBR280C	CPR1	P14832	162 aa	Known RBP	2.7	□□□□□ -1.98
SAF1	YBR280C	DUT1	P33317	147 aa		2.7	□□□□□ -1.98
SAF1	YBR280C	VMA21	P41806	77 aa		2.7	□□□□□ -1.98
SAF1	YBR280C	TY1A-OL	Q92392	440 aa	Known RBP	2.69	□□□□□ -1.98
SAF1	YBR280C	YER039C-A	P0CD97	72 aa		2.68	□□□□□ -1.98
SAF1	YBR280C	SPG1	P50088	95 aa		2.68	□□□□□ -1.98
SAF1	YBR280C	YJR085C	P47131	105 aa	Known RBP	2.68	□□□□□ -1.98
SAF1	YBR280C	ADH1	P00330	348 aa	Known RBP	2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms