RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W DCV1P43595 202 aa1.82□□□□□ -2.12
SWD3YBR175W BRP1P53194 125 aa1.82□□□□□ -2.12
SWD3YBR175W GPI19Q04082 140 aa1.82□□□□□ -2.12
SWD3YBR175W RPL13AQ12690 199 aaPredicted RBP1.82□□□□□ -2.12
SWD3YBR175W MED11Q99278 115 aa1.82□□□□□ -2.12
SWD3YBR175W MEC1P38111 2368 aa1.82□□□□□ -2.12
SWD3YBR175W GSC2P40989 1895 aa1.82□□□□□ -2.12
SWD3YBR175W DYN1P36022 4092 aa1.81□□□□□ -2.12
SWD3YBR175W FUN14P18411 198 aa1.81□□□□□ -2.12
SWD3YBR175W HSP10P38910 106 aa1.81□□□□□ -2.12
SWD3YBR175W YAE1P47118 141 aaPredicted RBP1.81□□□□□ -2.12
SWD3YBR175W YGL149WP53116 101 aa1.81□□□□□ -2.12
SWD3YBR175W YMR103CQ04436 120 aa1.81□□□□□ -2.12
SWD3YBR175W GPI11Q06636 219 aa1.81□□□□□ -2.12
SWD3YBR175W YRF1-3P0CX14 1859 aa1.8□□□□□ -2.12
SWD3YBR175W YRF1-7P0CX15 1859 aa1.8□□□□□ -2.12
SWD3YBR175W YRF1-6P53819 1859 aa1.8□□□□□ -2.12
SWD3YBR175W HYP2P23301 157 aaKnown RBP1.8□□□□□ -2.12
SWD3YBR175W PEP8P40335 379 aa1.8□□□□□ -2.12
SWD3YBR175W RGM1Q00453 211 aa1.8□□□□□ -2.12
SWD3YBR175W YPL067CQ02754 198 aa1.8□□□□□ -2.12
SWD3YBR175W YHR086W-AQ3E746 53 aa1.8□□□□□ -2.12
SWD3YBR175W FLO1P32768 1537 aa1.8□□□□□ -2.12
SWD3YBR175W FPR1P20081 114 aaKnown RBP1.79□□□□□ -2.12
SWD3YBR175W YFL051CP43552 160 aa1.79□□□□□ -2.12
SWD3YBR175W YLR365WQ7LIF2 110 aa1.79□□□□□ -2.12
SWD3YBR175W ACC1Q00955 2233 aaKnown RBP1.79□□□□□ -2.12
SWD3YBR175W NRG2P38082 220 aa1.78□□□□□ -2.12
SWD3YBR175W YBR219CP38317 127 aa1.78□□□□□ -2.12
SWD3YBR175W YLR162WQ06235 118 aa1.78□□□□□ -2.12
SWD3YBR175W TAR1Q8TGM6 124 aa1.78□□□□□ -2.12
SWD3YBR175W YLR419WQ06698 1435 aaKnown RBP1.77□□□□□ -2.13
SWD3YBR175W RTC6O14464 93 aa1.77□□□□□ -2.13
SWD3YBR175W YHR130CP38834 111 aa1.77□□□□□ -2.13
SWD3YBR175W AIM18P38884 321 aa1.77□□□□□ -2.13
SWD3YBR175W YEL008WP40001 126 aa1.77□□□□□ -2.13
SWD3YBR175W YER187WP40102 141 aa1.77□□□□□ -2.13
SWD3YBR175W IGO1P53897 168 aa1.77□□□□□ -2.13
SWD3YBR175W YMR090WQ04304 227 aaKnown RBP1.77□□□□□ -2.13
SWD3YBR175W RPL43AP0CX25 92 aaKnown RBP1.76□□□□□ -2.13
SWD3YBR175W RPL43BP0CX26 92 aa1.76□□□□□ -2.13
SWD3YBR175W MRPL15P36523 253 aa1.76□□□□□ -2.13
SWD3YBR175W PAU12P53343 120 aa1.76□□□□□ -2.13
SWD3YBR175W YPL261CQ08976 102 aa1.76□□□□□ -2.13
SWD3YBR175W MHF1Q3E835 90 aa1.76□□□□□ -2.13
SWD3YBR175W UBC4P15731 148 aa1.75□□□□□ -2.13
SWD3YBR175W MRPL11P36521 249 aaPredicted RBP1.75□□□□□ -2.13
SWD3YBR175W YLR296WQ05898 108 aa1.75□□□□□ -2.13
SWD3YBR175W DAD1Q12248 94 aa1.75□□□□□ -2.13
SWD3YBR175W YDR524C-BQ3E6R4 66 aa1.75□□□□□ -2.13
SWD3YBR175W OST5Q92316 86 aa1.75□□□□□ -2.13
SWD3YBR175W CYR1P08678 2026 aaKnown RBP1.74□□□□□ -2.13
SWD3YBR175W QCR8P08525 94 aa1.74□□□□□ -2.13
SWD3YBR175W YJL197C-AP0C5P0 93 aa1.74□□□□□ -2.13
SWD3YBR175W HUR1P45820 110 aa1.74□□□□□ -2.13
SWD3YBR175W FIT1Q04433 528 aa1.74□□□□□ -2.13
SWD3YBR175W SWC7Q06707 132 aa1.74□□□□□ -2.13
SWD3YBR175W MIC10Q96VH5 97 aa1.74□□□□□ -2.13
SWD3YBR175W RPL36BO14455 100 aaKnown RBP1.73□□□□□ -2.13
SWD3YBR175W RPL36AP05745 100 aaPredicted RBP1.73□□□□□ -2.13
SWD3YBR175W YHR213WP0CI67 198 aa1.73□□□□□ -2.13
SWD3YBR175W PRE1P22141 198 aaKnown RBP1.73□□□□□ -2.13
SWD3YBR175W YCL042WP25572 119 aa1.73□□□□□ -2.13
SWD3YBR175W RPL13BP40212 199 aaKnown RBP1.73□□□□□ -2.13
SWD3YBR175W GTT1P40582 234 aa1.73□□□□□ -2.13
SWD3YBR175W YIL014C-AQ02598 104 aa1.73□□□□□ -2.13
SWD3YBR175W YLR194CQ05777 254 aa1.73□□□□□ -2.13
SWD3YBR175W YNL146C-AQ3E7Z1 64 aa1.73□□□□□ -2.13
SWD3YBR175W YCR075W-AQ3E830 75 aa1.73□□□□□ -2.13
SWD3YBR175W YOS1Q3E834 85 aa1.73□□□□□ -2.13
SWD3YBR175W KSH1Q8TGJ3 72 aa1.73□□□□□ -2.13
SWD3YBR175W CDC39P25655 2108 aaKnown RBP1.73□□□□□ -2.13
SWD3YBR175W YGL014C-AP0C5N1 53 aa1.72□□□□□ -2.13
SWD3YBR175W YGL010WP25338 174 aa1.72□□□□□ -2.13
SWD3YBR175W PAU2P32612 120 aa1.72□□□□□ -2.13
SWD3YBR175W YBR027CP38220 110 aa1.72□□□□□ -2.13
SWD3YBR175W VMA21P41806 77 aa1.72□□□□□ -2.13
SWD3YBR175W SED1Q01589 338 aa1.72□□□□□ -2.13
SWD3YBR175W COA3Q3E7B2 85 aa1.72□□□□□ -2.13
SWD3YBR175W PCC1Q3E833 88 aa1.72□□□□□ -2.13
SWD3YBR175W YBR056W-AI2HB52 66 aa1.71□□□□□ -2.14
SWD3YBR175W RPL33AP05744 107 aaKnown RBP1.71□□□□□ -2.14
SWD3YBR175W ATG8P38182 117 aaRIP-Chip data1.71□□□□□ -2.14not detected
SWD3YBR175W RPL22BP56628 122 aaKnown RBP1.71□□□□□ -2.14
SWD3YBR175W HPA2Q06592 156 aa1.71□□□□□ -2.14
SWD3YBR175W VAM10Q08474 114 aa1.71□□□□□ -2.14
SWD3YBR175W COA6Q3E846 104 aa1.71□□□□□ -2.14
SWD3YBR175W SRX1P36077 127 aa1.7□□□□□ -2.14
SWD3YBR175W PAU24P38155 120 aa1.7□□□□□ -2.14
SWD3YBR175W YBR242WP38331 238 aa1.7□□□□□ -2.14
SWD3YBR175W YIR020CP40575 100 aa1.7□□□□□ -2.14
SWD3YBR175W LST8P41318 303 aa1.7□□□□□ -2.14
SWD3YBR175W SNN1P48232 102 aa1.7□□□□□ -2.14
SWD3YBR175W MIX14Q04341 121 aa1.7□□□□□ -2.14
SWD3YBR175W TY4B-HP0C2J7 1802 aa1.69□□□□□ -2.14
SWD3YBR175W TY4B-JP47024 1803 aa1.69□□□□□ -2.14
SWD3YBR175W PFY1P07274 126 aa1.69□□□□□ -2.14
SWD3YBR175W PAU19P0CE85 124 aa1.69□□□□□ -2.14
SWD3YBR175W PAU3P25610 124 aa1.69□□□□□ -2.14
SWD3YBR175W COX23P38824 151 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms