RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C SRB6P32570 121 aa1.21□□□□□ -2.22
RTG3YBL103C MSL1P40567 111 aaPredicted RBP1.21□□□□□ -2.22
RTG3YBL103C RPL37AP49166 88 aaKnown RBP1.21□□□□□ -2.22
RTG3YBL103C YOL118CQ08259 102 aa1.21□□□□□ -2.22
RTG3YBL103C HUG1Q6Q5K6 68 aa1.21□□□□□ -2.22
RTG3YBL103C YRF1-3P0CX14 1859 aa1.2□□□□□ -2.22
RTG3YBL103C YRF1-7P0CX15 1859 aa1.2□□□□□ -2.22
RTG3YBL103C YRF1-6P53819 1859 aa1.2□□□□□ -2.22
RTG3YBL103C TY4B-JP47024 1803 aa1.2□□□□□ -2.22
RTG3YBL103C CCW14O13547 238 aa1.2□□□□□ -2.22
RTG3YBL103C EMC5P40540 141 aa1.2□□□□□ -2.22
RTG3YBL103C PAU5P43575 122 aa1.2□□□□□ -2.22
RTG3YBL103C LCL2Q08045 131 aa1.2□□□□□ -2.22
RTG3YBL103C YDR029WQ12111 104 aa1.2□□□□□ -2.22
RTG3YBL103C RRT15Q3E811 62 aa1.2□□□□□ -2.22
RTG3YBL103C HMRA1P0CY11 126 aa1.19□□□□□ -2.22
RTG3YBL103C ROX3P25046 220 aa1.18□□□□□ -2.22
RTG3YBL103C MVB12P42939 101 aa1.18□□□□□ -2.22
RTG3YBL103C YDR210WQ03482 75 aa1.18□□□□□ -2.22
RTG3YBL103C YMR082CQ04276 118 aa1.18□□□□□ -2.22
RTG3YBL103C HHY1P39982 102 aa1.18□□□□□ -2.22
RTG3YBL103C IMP2P46972 177 aa1.18□□□□□ -2.22
RTG3YBL103C LCL1Q02786 101 aa1.18□□□□□ -2.22
RTG3YBL103C YHR213W-BQ8TGK1 99 aa1.18□□□□□ -2.22
RTG3YBL103C LTE1P07866 1435 aa1.17□□□□□ -2.22
RTG3YBL103C SNU13P39990 126 aaKnown RBP1.17□□□□□ -2.22
RTG3YBL103C YDR042CQ03205 200 aa1.17□□□□□ -2.22
RTG3YBL103C YGL194C-AQ2V2P6 80 aa1.17□□□□□ -2.22
RTG3YBL103C YCR095W-AQ3E787 52 aa1.17□□□□□ -2.22
RTG3YBL103C GCV3P39726 170 aaPredicted RBP1.16□□□□□ -2.22
RTG3YBL103C RPA190P10964 1664 aaKnown RBP1.16□□□□□ -2.22
RTG3YBL103C YLR255CO13574 117 aa1.15□□□□□ -2.23
RTG3YBL103C SCP1Q08873 200 aa1.15□□□□□ -2.23
RTG3YBL103C SUS1Q6WNK7 96 aa1.15□□□□□ -2.23
RTG3YBL103C BNI1P41832 1953 aa1.14□□□□□ -2.23
RTG3YBL103C SLH1P53327 1967 aaKnown RBP1.14□□□□□ -2.23
RTG3YBL103C RSM18P40033 138 aa1.14□□□□□ -2.23
RTG3YBL103C YMR141CP40211 102 aa1.14□□□□□ -2.23
RTG3YBL103C NHP10Q03435 203 aa1.14□□□□□ -2.23
RTG3YBL103C HFA1P32874 2273 aa1.14□□□□□ -2.23
RTG3YBL103C SRB8P25648 1427 aa1.14□□□□□ -2.23
RTG3YBL103C YSP2Q06681 1438 aa1.14□□□□□ -2.23
RTG3YBL103C ECM12O13529 151 aa1.13□□□□□ -2.23
RTG3YBL103C MRPL38P35996 138 aaPredicted RBP1.13□□□□□ -2.23
RTG3YBL103C YJR128WP47162 119 aa1.13□□□□□ -2.23
RTG3YBL103C COX12Q01519 83 aa1.13□□□□□ -2.23
RTG3YBL103C YPL038W-AQ3E7B4 63 aa1.13□□□□□ -2.23
RTG3YBL103C SNA2P56508 79 aa1.12□□□□□ -2.23
RTG3YBL103C ICY1Q04329 127 aa1.12□□□□□ -2.23
RTG3YBL103C SWR1Q05471 1514 aa1.11□□□□□ -2.23
RTG3YBL103C GDB1Q06625 1536 aa1.11□□□□□ -2.23
RTG3YBL103C PAU6P0CE90 120 aa1.11□□□□□ -2.23
RTG3YBL103C PAU18P0CE91 120 aa1.11□□□□□ -2.23
RTG3YBL103C YIL086CP40503 102 aa1.11□□□□□ -2.23
RTG3YBL103C SPC1P46965 94 aa1.11□□□□□ -2.23
RTG3YBL103C COX19Q3E731 98 aa1.11□□□□□ -2.23
RTG3YBL103C YMR175W-AQ3E766 64 aa1.11□□□□□ -2.23
RTG3YBL103C ESC1Q03661 1658 aaKnown RBP1.1□□□□□ -2.23
RTG3YBL103C MRP17P28778 131 aa1.1□□□□□ -2.23
RTG3YBL103C YBL071CP38185 102 aa1.1□□□□□ -2.23
RTG3YBL103C SHU1P38751 150 aa1.1□□□□□ -2.23
RTG3YBL103C YOR034C-AQ3E735 80 aa1.1□□□□□ -2.23
RTG3YBL103C NTE1Q04958 1679 aa1.09□□□□□ -2.23
RTG3YBL103C POL1P13382 1468 aa1.09□□□□□ -2.23
RTG3YBL103C MRX7P53869 86 aa1.09□□□□□ -2.24
RTG3YBL103C YNR034W-AQ3E841 98 aa1.09□□□□□ -2.24
RTG3YBL103C URB1P34241 1764 aaKnown RBP1.09□□□□□ -2.24
RTG3YBL103C YER188C-AP0C0V2 99 aa1.08□□□□□ -2.24
RTG3YBL103C AIM19P40502 157 aa1.08□□□□□ -2.24
RTG3YBL103C RPS11AP0CX47 156 aaKnown RBP1.07□□□□□ -2.24
RTG3YBL103C RPS11BP0CX48 156 aaKnown RBP1.07□□□□□ -2.24
RTG3YBL103C MPC2P38857 129 aa1.07□□□□□ -2.24
RTG3YBL103C RPL37BP51402 88 aaKnown RBP1.07□□□□□ -2.24
RTG3YBL103C YBR292CP38357 123 aa1.06□□□□□ -2.24
RTG3YBL103C SEC16P48415 2195 aaKnown RBP1.06□□□□□ -2.24
RTG3YBL103C MYO1P08964 1928 aa1.05□□□□□ -2.24
RTG3YBL103C SEC7P11075 2009 aaKnown RBP1.05□□□□□ -2.24
RTG3YBL103C RPL43AP0CX25 92 aaKnown RBP1.05□□□□□ -2.24
RTG3YBL103C RPL43BP0CX26 92 aa1.05□□□□□ -2.24
RTG3YBL103C NHP2P32495 156 aaPredicted RBP1.05□□□□□ -2.24
RTG3YBL103C PAU20Q08322 120 aa1.05□□□□□ -2.24
RTG3YBL103C MHF2Q3E829 80 aa1.05□□□□□ -2.24
RTG3YBL103C PAU1P0CE88 120 aa1.04□□□□□ -2.24
RTG3YBL103C PAU14P0CE89 120 aa1.04□□□□□ -2.24
RTG3YBL103C PAU8P0CE92 120 aa1.04□□□□□ -2.24
RTG3YBL103C PAU11P0CE93 120 aa1.04□□□□□ -2.24
RTG3YBL103C RPA12P32529 125 aaKnown RBP1.04□□□□□ -2.24
RTG3YBL103C PAU13P38725 120 aa1.04□□□□□ -2.24
RTG3YBL103C PAU4P53427 120 aa1.04□□□□□ -2.24
RTG3YBL103C PAU10Q03050 120 aa1.04□□□□□ -2.24
RTG3YBL103C PAU9Q3E770 120 aa1.04□□□□□ -2.24
RTG3YBL103C YKL068W-AQ3E826 78 aa1.04□□□□□ -2.24
RTG3YBL103C YCR085WP25650 117 aa1.03□□□□□ -2.24
RTG3YBL103C LAA1P39526 2014 aa1.03□□□□□ -2.24
RTG3YBL103C BSC4P53841 131 aa1.03□□□□□ -2.24
RTG3YBL103C POC4Q12245 148 aaPredicted RBP1.03□□□□□ -2.24
RTG3YBL103C AUA1P32450 94 aa1.02□□□□□ -2.25
RTG3YBL103C CWP2P43497 92 aa1.02□□□□□ -2.25
RTG3YBL103C YRF1-1P0CX20 1796 aa1.02□□□□□ -2.25
RTG3YBL103C YRF1-5P0CX21 1796 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 98.2 ms