RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	CMTR2	Q8IYT2	770 aa	Known RBP	5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	SPATA5	Q8NB90	893 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	KAT2B	Q92831	832 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	APBB2	Q92870	758 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	SHD	Q96IW2	340 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	NEUROD6	Q96NK8	337 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	TMEM209	Q96SK2	561 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	NUP88	Q99567	741 aa	Predicted RBP	5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	TCF25	Q9BQ70	676 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	CHMP4B	Q9H444	224 aa	Known RBP	5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	A1CF	Q9NQ94	594 aa	Known RBP	5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	ENTPD7	Q9NQZ7	604 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	HMG20B	Q9P0W2	317 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	EMC9	Q9Y3B6	208 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	MRVI1	Q9Y6F6	885 aa		5.94	□□□□□ -1.46
CASC19-256	ENST00000641746	MYH13	Q9UKX3	1938 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	AKAP13	Q12802	2813 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746		A0A1W2PQH9	124 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	TCRBV5S2	A0A599	114 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	HGS	O14964	777 aa	Predicted RBP	5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	FGF18	O76093	207 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	ZNF202	O95125	648 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	KCNH1	O95259	989 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	SSB	P05455	408 aa	Known RBP eCLIP	5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	FAM163B	P0C2L3	166 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	ZNF806	P0C7X5	589 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	CYP4F3	Q08477	520 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	SRSF5	Q13243	272 aa	Known RBP	5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	PPP2R5B	Q15173	497 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	NRN1L	Q496H8	165 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	TRMT10B	Q6PF06	316 aa	Known RBP	5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	TMC5	Q6UXY8	1006 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	CCDC149	Q6ZUS6	474 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	LRRC47	Q8N1G4	583 aa	Known RBP	5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	SAMD3	Q8N6K7	520 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	FRS2	Q8WU20	508 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	TRMT2B	Q96GJ1	504 aa	Known RBP	5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	SLK	Q9H2G2	1235 aa	Predicted RBP	5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	ARRDC1-AS1	Q9H2J1	176 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	ACAD9	Q9H845	621 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	FRMD4B	Q9Y2L6	1034 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	MYO10	Q9HD67	2058 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	ZNF462	Q96JM2	2506 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	IL16	Q14005	1332 aa		5.93	□□□□□ -1.46
CASC19-256	ENST00000641746	MICAL3	Q7RTP6	2002 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	C4orf47	A7E2U8	309 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	ARNTL	O00327	626 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	NKRF	O15226	690 aa	Known RBP eCLIP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	RRP9	O43818	475 aa	Known RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	TADA3	O75528	432 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	ALDH1L1	O75891	902 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	TXN	P10599	105 aa	Known RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	EEF2	P13639	858 aa	Known RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	CEACAM1	P13688	526 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	CAST	P20810	708 aa	Known RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	CD72	P21854	359 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	RPL11	P62913	178 aa	Known RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	HDAC1	Q13547	482 aa	Predicted RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	MAPRE1	Q15691	268 aa	Known RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	TWISTNB	Q3B726	338 aa	Predicted RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	COLEC12	Q5KU26	742 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	IQCE	Q6IPM2	695 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	THNSL1	Q8IYQ7	743 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	C19orf47	Q8N9M1	422 aa	Known RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	NUDT10	Q8NFP7	164 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	SVIP	Q8NHG7	77 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	EXTL1	Q92935	676 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	ANAPC16	Q96DE5	110 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	NUDT11	Q96G61	164 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	KLHL5	Q96PQ7	755 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	ADO	Q96SZ5	270 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	TRIM8	Q9BZR9	551 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	ZHX3	Q9H4I2	956 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	KANSL2	Q9H9L4	492 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	PRMT8	Q9NR22	394 aa	Predicted RBP	5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	FANCL	Q9NW38	375 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	APEX2	Q9UBZ4	518 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	PIEZO2	Q9H5I5	2752 aa		5.92	□□□□□ -1.46
CASC19-256	ENST00000641746	TRIP12	Q14669	1992 aa	Predicted RBP	5.91	□□□□□ -1.46
CASC19-256	ENST00000641746		F5H6K3	240 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	TIMM44	O43615	452 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	DHX16	O60231	1041 aa	Known RBP	5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	CAND2	O75155	1236 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	CDC45	O75419	566 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	KLHL18	O94889	574 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	AKR1B1	P15121	316 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	CA8	P35219	290 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	ETFB	P38117	255 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	BCL6	P41182	706 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	MAGEA9	P43362	315 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	RFX5	P48382	616 aa	Predicted RBP	5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	GIPR	P48546	466 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	GATM	P50440	423 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	GABPA	Q06546	454 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	MTAP	Q13126	283 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	BRD3	Q15059	726 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	KIAA0753	Q2KHM9	967 aa		5.91	□□□□□ -1.46
CASC19-256	ENST00000641746	USP39	Q53GS9	565 aa	Known RBP	5.91	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms