RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PATE3B3GLJ2 98 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 M0QZQ0 153 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 PRRG1O14668 218 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 TRDMT1O14717 391 aaKnown RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 NFICP08651 508 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 CEACAM1P13688 526 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 PTMSP20962 102 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 NR2F2P24468 414 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 GUCY2FP51841 1108 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 STX17P56962 302 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 NLRP12P59046 1061 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 PPP2R3AQ06190 1150 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 SNRNP35Q16560 246 aaKnown RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 SH3PXD2AQ5TCZ1 1133 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 PMS2CLQ68D20 193 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 ANKRD40Q6AI12 368 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 CENPPQ6IPU0 288 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 TTI2Q6NXR4 508 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 C11orf57Q6ZUT1 292 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 PIP4P1Q86T03 277 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 BRSK2Q8IWQ3 736 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 ZC3H3Q8IXZ2 948 aaKnown RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 EFCAB13Q8IY85 973 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 GPD1LQ8N335 351 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 C12orf50Q8NA57 414 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 XXYLT1Q8NBI6 393 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 LEMD2Q8NC56 503 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 TTC8Q8TAM2 541 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 GOLGA5Q8TBA6 731 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 E2F7Q96AV8 911 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 C18orf25Q96B23 403 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 DUSP9Q99956 384 aaKnown RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 ASAH2Q9NR71 780 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 DMAC2Q9NW81 257 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 RBAKQ9NYW8 714 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 TUBGCP4Q9UGJ1 667 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 EBF1Q9UH73 591 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 KLK13Q9UKR3 277 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 MAFFQ9ULX9 164 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 NEUROG3Q9Y4Z2 214 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 ARID1BQ8NFD5 2236 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-225ENST00000641720 NBPF19A0A087WUL8 3843 aa7.96□□□□□ -1.14
PHGDH-225ENST00000641720 SYCE3A1L190 88 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 PODXLO00592 558 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 PSMA7O14818 248 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 HYAL3O43820 417 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 CALUO43852 315 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 EXOC3O60645 756 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 OAZ2O95190 189 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 KIF20AO95235 890 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 EGFP01133 1207 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 OR4Q2P0C623 313 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 MYL4P12829 197 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 HNRNPLP14866 589 aaKnown RBP eCLIP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 BCKDHBP21953 392 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 YARSP54577 528 aaKnown RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 SNRPFP62306 86 aaKnown RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 CYP24A1Q07973 514 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 PAK1Q13153 545 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 NFIL3Q16649 462 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 GAB4Q2WGN9 574 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 EDRF1Q3B7T1 1238 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 ARHGAP29Q52LW3 1261 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 LMBRD2Q68DH5 695 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 JADE1Q6IE81 842 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 PROSER1Q86XN7 944 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 SLC9A9Q8IVB4 645 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 MLKLQ8NB16 471 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 TMEM174Q8WUU8 243 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 SYAP1Q96A49 352 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 FAM212AQ96EL1 285 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 DHTKD1Q96HY7 919 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 HHIPQ96QV1 700 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 TMEM209Q96SK2 561 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 FUCA2Q9BTY2 467 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 GTPBP4Q9BZE4 634 aaKnown RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 GPR88Q9GZN0 384 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 RPF1Q9H9Y2 349 aaKnown RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 PDE11AQ9HCR9 933 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 TOPORSQ9NS56 1045 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 CACNA2D2Q9NY47 1150 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 CGNQ9P2M7 1197 aaKnown RBP7.95□□□□□ -1.14
PHGDH-225ENST00000641720 MSRB2Q9Y3D2 182 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 COL12A1Q99715 3063 aa7.95□□□□□ -1.14
PHGDH-225ENST00000641720 MTMR11A4FU01 709 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 PPEF2O14830 753 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 KIAA0391O15091 583 aaKnown RBP7.94□□□□□ -1.14
PHGDH-225ENST00000641720 RNF40O75150 1001 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 TADA3O75528 432 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 ATF6P18850 670 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 FAM193AP78312 1265 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 LRRC63Q05C16 580 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 TYRO3Q06418 890 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 STIM1Q13586 685 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 TMEM132DQ14C87 1099 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 PSMD6Q15008 389 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 ZBTB6Q15916 424 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 STX1AQ16623 288 aa7.94□□□□□ -1.14
PHGDH-225ENST00000641720 KYAT1Q16773 422 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms