RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 OTOAQ7RTW8 1153 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 NLGN2Q8NFZ4 835 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 ANKRD36BP1Q96IX9 119 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 NPHS2Q9NP85 383 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 ARHGEF3Q9NR81 526 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 DDX56Q9NY93 547 aaKnown RBP17.63■□□□□ 0.41
PHGDH-223ENST00000641597 BRCA1P38398 1863 aaKnown RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 IGKV6-21A0A0C4DH24 114 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 CNMDO75829 334 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 VTNP04004 478 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 BAG6P46379 1132 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 GEMIN4P57678 1058 aaKnown RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 CELF3Q5SZQ8 465 aaKnown RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 BBS12Q6ZW61 710 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 TTC25Q96NG3 672 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 ZNF518BQ9C0D4 1074 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 FZD8Q9H461 694 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 PSMC3IPQ9P2W1 217 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 USP18Q9UMW8 372 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 C2orf71A6NGG8 1288 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 STAG3L1P0CL83 205 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 PTPN11Q06124 597 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 MXD4Q14582 209 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 SH3D19Q5HYK7 790 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 EFHC2Q5JST6 749 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 HHATQ5VTY9 493 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 PPIL6Q8IXY8 311 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 CCHCR1Q8TD31 782 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 TCP10LQ8TDR4 215 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 HEXIM2Q96MH2 286 aaKnown RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 TACO1Q9BSH4 297 aaKnown RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 RPF1Q9H9Y2 349 aaKnown RBP17.62■□□□□ 0.41
PHGDH-223ENST00000641597 IFT122Q9HBG6 1241 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 NR2E3Q9Y5X4 410 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 BRCA2P51587 3418 aa17.62■□□□□ 0.41
PHGDH-223ENST00000641597 A0A087WZ62 844 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 PRPF4O43172 522 aaKnown RBP eCLIP17.61■□□□□ 0.413e-6■■■■□ 19.9
PHGDH-223ENST00000641597 HCRTO43612 131 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 B4GALT4O60513 344 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 POLR2BP30876 1174 aaKnown RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 ELK3P41970 407 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 MSH2P43246 934 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 AP3M2P53677 418 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 IRX3P78415 501 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 PDK4Q16654 411 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 RNF43Q68DV7 783 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 CYP4V2Q6ZWL3 525 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 CXorf38Q8TB03 319 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 LRRC8CQ8TDW0 803 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 NCAPGQ9BPX3 1015 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 LBHD1Q9BQE6 289 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 FDXACB1Q9BRP7 624 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 CFAP73A6NFT4 308 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 EDF1O60869 148 aaKnown RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 PTPN7P35236 360 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 POLNQ7Z5Q5 900 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 VSIG1Q86XK7 387 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 TDRPQ86YL5 185 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 RIBC1Q8N443 379 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 MZB1Q8WU39 189 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 ZNF75CPQ92670 426 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 PRR11Q96HE9 360 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-223ENST00000641597 BCO2Q9BYV7 579 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 TRIP11Q15643 1979 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 LOC285556D6RIA3 1793 aa17.61■□□□□ 0.41
PHGDH-223ENST00000641597 E5RJQ4 531 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 UNC5CO95185 931 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 T-ENOLP0DO92 83 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 GPD2P43304 727 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 CDH6P55285 790 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 ARL4CP56559 192 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 MKRN3Q13064 507 aaKnown RBP17.6■□□□□ 0.41
PHGDH-223ENST00000641597 ZC3H12AQ5D1E8 599 aaKnown RBP17.6■□□□□ 0.41
PHGDH-223ENST00000641597 PRPF39Q86UA1 669 aaKnown RBP17.6■□□□□ 0.41
PHGDH-223ENST00000641597 PALM2Q8IXS6 379 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 RFWD2Q8NHY2 731 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 SLC16A10Q8TF71 515 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 DCAKDQ8WVC6 231 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 FOXP3Q9BZS1 431 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 ANP32DO95626 131 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 TRUB2O95900 331 aaKnown RBP17.6■□□□□ 0.41
PHGDH-223ENST00000641597 KRT7P08729 469 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 TXNP10599 105 aaKnown RBP17.6■□□□□ 0.41
PHGDH-223ENST00000641597 TFE3P19532 575 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-223ENST00000641597 GRM1Q13255 1194 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 NOL9Q5SY16 702 aaKnown RBP17.6■□□□□ 0.41
PHGDH-223ENST00000641597 ZNF276Q8N554 614 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 NETO2Q8NC67 525 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 KCNV2Q8TDN2 545 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 N4BP2L2Q92802 583 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-223ENST00000641597 SERAC1Q96JX3 654 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 ADPGKQ9BRR6 497 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 KANSL3Q9P2N6 904 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 STRIP2Q9ULQ0 834 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 HEY1Q9Y5J3 304 aa17.6■□□□□ 0.41
PHGDH-223ENST00000641597 KBTBD13C9JR72 458 aa17.59■□□□□ 0.41
PHGDH-223ENST00000641597 F5H423 210 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms