RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 LCP1P13796 627 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 TYMPP19971 482 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 GJC1P36383 396 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 SLC8A3P57103 927 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 C8orf74Q6P047 294 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 CLEC20AQ6ZU45 233 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 ZDHHC17Q8IUH5 632 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 KATNAL2Q8IYT4 538 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 VWCEQ96DN2 955 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 PLVAPQ9BX97 442 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 KRT82Q9NSB4 513 aa19.18■□□□□ 0.66
PHGDH-209ENST00000641074 C2CD4BA6NLJ0 364 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 HOXA2O43364 376 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 CAPN15O75808 1086 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 FAM200BP0CF97 657 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 FLT3P36888 993 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 ACADSBP45954 432 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 CTCFP49711 727 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-209ENST00000641074 ZNF143P52747 638 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-209ENST00000641074 VSNL1P62760 191 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 SLC7A5Q01650 507 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 ATP13A4Q4VNC1 1196 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 GLE1Q53GS7 698 aaKnown RBP19.17■□□□□ 0.66
PHGDH-209ENST00000641074 INTS6LQ5JSJ4 861 aaKnown RBP19.17■□□□□ 0.66
PHGDH-209ENST00000641074 LRRC38Q5VT99 294 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 FAM171BQ6P995 826 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 FAM35AQ86V20 835 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 SLC13A5Q86YT5 568 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-209ENST00000641074 NPAS4Q8IUM7 802 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 ZDHHC14Q8IZN3 488 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 OR10T2Q8NGX3 314 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 CLEC4CQ8WTT0 213 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 RXFP2Q8WXD0 754 aa19.17■□□□□ 0.66
PHGDH-209ENST00000641074 DMGDHQ9UI17 866 aaKnown RBP19.17■□□□□ 0.66
PHGDH-209ENST00000641074 MKI67P46013 3256 aaKnown RBP19.17■□□□□ 0.66
PHGDH-209ENST00000641074 TCRBV7S2A1N4TA0A589 114 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 LRCH4O75427 683 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 PDGFRAP16234 1089 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 GPD1P21695 349 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 CLCN6P51797 869 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 MAP3K7CLP57077 242 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 LLGL1Q15334 1064 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 TXNRD3NBQ6F5E7 133 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 WDR93Q6P2C0 686 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.16■□□□□ 0.66
PHGDH-209ENST00000641074 THEM5Q8N1Q8 247 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 PKMYT1Q99640 499 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 DDX47Q9H0S4 455 aaKnown RBP19.16■□□□□ 0.66
PHGDH-209ENST00000641074 ARGLU1Q9NWB6 273 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-209ENST00000641074 HCSTQ9UBK5 93 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 NRP1O14786 923 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 TADA2AO75478 443 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 ZMYND10O75800 440 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 ZRANB2O95218 330 aaKnown RBP eCLIP19.16■□□□□ 0.66
PHGDH-209ENST00000641074 TUBBP07437 444 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 HSPA1AP0DMV8 641 aaKnown RBP19.16■□□□□ 0.66
PHGDH-209ENST00000641074 HSPA1BP0DMV9 641 aaKnown RBP19.16■□□□□ 0.66
PHGDH-209ENST00000641074 YWHAHQ04917 246 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-209ENST00000641074 CNKSR3Q6P9H4 555 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 EXD1Q8NHP7 514 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 KCTD13Q8WZ19 329 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 MYLPFQ96A32 169 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 TMEM209Q96SK2 561 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 SMOQ99835 787 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 HINFPQ9BQA5 517 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 CNPY3Q9BT09 278 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 KLHL11Q9NVR0 708 aa19.16■□□□□ 0.66
PHGDH-209ENST00000641074 KIAA0100Q14667 2235 aaKnown RBP19.16■□□□□ 0.66
PHGDH-209ENST00000641074 GOLGA6L10A0A0M3HER8 536 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 TBKBP1A7MCY6 615 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 SART1O43290 800 aaKnown RBP19.15■□□□□ 0.66
PHGDH-209ENST00000641074 AP1G2O75843 785 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 CACNA2D1P54289 1103 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 SLC25A11Q02978 314 aaKnown RBP19.15■□□□□ 0.66
PHGDH-209ENST00000641074 IKBKEQ14164 716 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 ACAP1Q15027 740 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 BRD3Q15059 726 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 LRRTM3Q86VH5 581 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 TMEM30AQ9NV96 361 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 TMLHEQ9NVH6 421 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 ASNSD1Q9NWL6 643 aa19.15■□□□□ 0.66
PHGDH-209ENST00000641074 MICAL3Q7RTP6 2002 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 FSCN2O14926 492 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 RAD51CO43502 376 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 TRAPPC3O43617 180 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 ALDH2P05091 517 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 ITGB8P26012 769 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 IL1R2P27930 398 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 RFC2P35250 354 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 SCNN1AP37088 669 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 SLC11A1P49279 550 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 RABGGTBP53611 331 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 ADIGQ0VDE8 80 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 CCDC14Q49A88 953 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 SH3PXD2AQ5TCZ1 1133 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 SLC26A9Q7LBE3 791 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 NECAB2Q7Z6G3 386 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 ANKS1BQ7Z6G8 1248 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 CCDC50Q8IVM0 306 aa19.14■□□□□ 0.66
PHGDH-209ENST00000641074 PRELID2Q8N945 189 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms