RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 USP46P62068 366 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 RUNX3Q13761 415 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 EDRF1Q3B7T1 1238 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 ZCWPW2Q504Y3 356 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 MAMSTRQ6ZN01 415 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 ELMO3Q96BJ8 720 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 CYP2S1Q96SQ9 504 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 MED10Q9BTT4 135 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 SDCBP2Q9H190 292 aa26.82■■□□□ 1.88
VEGFA-232ENST00000640653 HOOK1Q9UJC3 728 aaKnown RBP26.82■■□□□ 1.88
VEGFA-232ENST00000640653 C2orf78A6NCI8 922 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 SMC2O95347 1197 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 MTF1Q14872 753 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 PDGFRLQ15198 375 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 DGKKQ5KSL6 1271 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 TXNDC11Q6PKC3 985 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 SMYD4Q8IYR2 804 aaPredicted RBP26.81■■□□□ 1.88
VEGFA-232ENST00000640653 ARL14EPQ8N8R7 260 aaPredicted RBP26.81■■□□□ 1.88
VEGFA-232ENST00000640653 SLC22A12Q96S37 553 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 EBF3Q9H4W6 596 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 HPS4Q9NQG7 708 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 GCNT4Q9P109 453 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 PCDHGA2Q9Y5H1 932 aa26.81■■□□□ 1.88
VEGFA-232ENST00000640653 PTPRDP23468 1912 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 KINO60870 393 aaKnown RBP26.8■■□□□ 1.88
VEGFA-232ENST00000640653 TRIM49P0CI25 452 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 TRIM49CP0CI26 452 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 HDCP19113 662 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 TRIM21P19474 475 aaKnown RBP26.8■■□□□ 1.88
VEGFA-232ENST00000640653 GCLMP48507 274 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 CCR3P51677 355 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 CACNA2D1P54289 1103 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 AMPD2Q01433 879 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 PON2Q15165 354 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 ZNF77Q15935 545 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 TRIM68Q6AZZ1 485 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 ADSSL1Q8N142 457 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 ENGASEQ8NFI3 743 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 RIN3Q8TB24 985 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 ATRIPQ8WXE1 791 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 SLITRK1Q96PX8 696 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 GSDMAQ96QA5 445 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 ZSCAN32Q9NX65 697 aa26.8■■□□□ 1.88
VEGFA-232ENST00000640653 KIF26AQ9ULI4 1882 aaPredicted RBP26.8■■□□□ 1.88
VEGFA-232ENST00000640653 RTN3O95197 1032 aaPredicted RBP26.79■■□□□ 1.88
VEGFA-232ENST00000640653 USP4Q13107 963 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 ZNF658Q5TYW1 1059 aaPredicted RBP26.79■■□□□ 1.88
VEGFA-232ENST00000640653 SPOPLQ6IQ16 392 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 ACOT1Q86TX2 421 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 FAM35AQ86V20 835 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 UNC93AQ86WB7 457 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 NUP93Q8N1F7 819 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 CCDC150Q8NCX0 1101 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 TTC16Q8NEE8 873 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 TIGD1Q96MW7 591 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 FAM126AQ9BYI3 521 aaPredicted RBP26.79■■□□□ 1.88
VEGFA-232ENST00000640653 GTPBP4Q9BZE4 634 aaKnown RBP26.79■■□□□ 1.88
VEGFA-232ENST00000640653 TMEM30AQ9NV96 361 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 ARHGAP26Q9UNA1 814 aa26.79■■□□□ 1.88
VEGFA-232ENST00000640653 CETN3O15182 167 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 TCF3P15923 654 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 ASPAP45381 313 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 NDST1P52848 882 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 PPP3CAQ08209 521 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 COBLL1Q53SF7 1204 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 TSSK4Q6SA08 328 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 OSCP1Q8WVF1 389 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 SMARCE1Q969G3 411 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 SMARCD1Q96GM5 515 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 TSG101Q99816 390 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 MMRN2Q9H8L6 949 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 TMEM8AQ9HCN3 771 aa26.78■■□□□ 1.88
VEGFA-232ENST00000640653 DMAP1Q9NPF5 467 aaPredicted RBP26.78■■□□□ 1.88
VEGFA-232ENST00000640653 RBM12Q9NTZ6 932 aaKnown RBP26.78■■□□□ 1.88
VEGFA-232ENST00000640653 DUS2Q9NX74 493 aaKnown RBP26.78■■□□□ 1.88
VEGFA-232ENST00000640653 ZNF638Q14966 1978 aaKnown RBP26.77■■□□□ 1.88
VEGFA-232ENST00000640653 GREB1Q4ZG55 1949 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 ZNF840PA6NDX5 716 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 EPB41P11171 864 aaKnown RBP26.77■■□□□ 1.88
VEGFA-232ENST00000640653 ARSAP15289 507 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 YWHAQP27348 245 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 GTF2H1P32780 548 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 PRCPP42785 496 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 IFNAR2P48551 515 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 NRLP54845 237 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 IFRD2Q12894 506 aaPredicted RBP26.77■■□□□ 1.88
VEGFA-232ENST00000640653 TAF10Q12962 218 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 SYNPOQ8N3V7 929 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 SPEM1Q8N4L4 309 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 CPA6Q8N4T0 437 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 ZBTB44Q8NCP5 570 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 TAS1R2Q8TE23 839 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 SH3RF2Q8TEC5 729 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 NELL1Q92832 810 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 CACNA1IQ9P0X4 2223 aa26.77■■□□□ 1.88
VEGFA-232ENST00000640653 F5P12259 2224 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 ABL1P00519 1130 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 CXCL12P48061 93 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 CCINQ13939 588 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 KRT39Q6A163 491 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms