RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 ZNF276Q8N554 614 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 BANPQ8N9N5 519 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 AGBL3Q8NEM8 1001 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 SPATA18Q8TC71 538 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 MECRQ9BV79 373 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 YIPF3Q9GZM5 350 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 IKBKGQ9Y6K9 419 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 HAUS5O94927 633 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 RASSF2P50749 326 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 CCNHP51946 323 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 CTC1Q2NKJ3 1217 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 C1orf228Q6PIY5 440 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 SCYL3Q8IZE3 742 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 UBR7Q8N806 425 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 RNF149Q8NC42 400 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 TRIM56Q9BRZ2 755 aaKnown RBP17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 HMGXB4Q9UGU5 601 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 SMNDC1O75940 238 aaKnown RBP eCLIP17.31■□□□□ 0.362e-9■■□□□ 13.3
HNRNPU-228ENST00000640306 ARFIP2P53365 341 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 XRRA1Q6P2D8 792 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 TMEM192Q8IY95 271 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 REPS2Q8NFH8 660 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 MZB1Q8WU39 189 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 PPP1R16BQ96T49 567 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 TMEM120AQ9BXJ8 343 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 TRIM55Q9BYV6 548 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 ZNF395Q9H8N7 513 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 BATF3Q9NR55 127 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 MAFBQ9Y5Q3 323 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 TCRBV9S1A1TA0A576 114 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 ADCY3O60266 1144 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 WFS1O76024 890 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 CCDC6Q16204 474 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 NAIF1Q69YI7 327 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 DARS2Q6PI48 645 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 PRPF39Q86UA1 669 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 ZBED3Q96IU2 234 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 CDHR1Q96JP9 859 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 ACAD9Q9H845 621 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 LSM8O95777 96 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 ERBB2P04626 1255 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 YY1P25490 414 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 MIPP30301 263 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 KPNB1Q14974 876 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 HADHQ16836 314 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 KLHL38Q2WGJ6 581 aa17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 MARCOQ9UEW3 520 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-228ENST00000640306 ARID2Q68CP9 1835 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 FAM237BA0A1B0GVD1 139 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 E5RJQ4 531 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 B4GALT5O43286 388 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 KRT36O76013 467 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 PIGRP01833 764 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 INHBAP08476 426 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 KITP10721 976 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 ASPAP45381 313 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 SLC18A1P54219 525 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 SMAD1Q15797 465 aaKnown RBP17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 CDHR3Q6ZTQ4 885 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 BBS12Q6ZW61 710 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 PCGF5Q86SE9 256 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 WDR49Q8IV35 697 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 PPM1NQ8N819 430 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 MTMR14Q8NCE2 650 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 ZNF280CQ8ND82 737 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 TWNKQ96RR1 684 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 PCYT2Q99447 389 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 ENO4A6NNW6 628 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 GYG2O15488 501 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 ENPEPQ07075 957 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 DPYSL3Q14195 570 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 SGSM1Q2NKQ1 1148 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 MUM1Q2TAK8 710 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 ALYREFQ86V81 257 aaKnown RBP17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 UBA3Q8TBC4 463 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 TRAPPC12Q8WVT3 735 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 TEX13BQ9BXU2 312 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 SLC13A1Q9BZW2 595 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 HACL1Q9UJ83 578 aa17.29■□□□□ 0.36
HNRNPU-228ENST00000640306 MCF2LO15068 1137 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 KRT7P08729 469 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 MYL2P10916 166 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 EIF4BP23588 611 aaKnown RBP17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 TUBP50607 506 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 BLMHQ13867 455 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 BMPR2Q13873 1038 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 RCN1Q15293 331 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 STXBP2Q15833 593 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 RINLQ6ZS11 566 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 VPS52Q8N1B4 723 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 MCUR1Q96AQ8 359 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 NLRP4Q96MN2 994 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 PICK1Q9NRD5 415 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 GPATCH2LQ9NWQ4 482 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 AFG3L2Q9Y4W6 797 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 H7C0C1 242 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms