RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 FAXDC2Q96IV6 333 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 ATP6V1G3Q96LB4 118 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 ACAP3Q96P50 834 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 DCLK3Q9C098 648 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 LHX5Q9H2C1 402 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 TMBIM4Q9HC24 238 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 AGAP1Q9UPQ3 857 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 C2CD2Q9Y426 696 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 COL4A4P53420 1690 aaPredicted RBP14.6□□□□□ -0.07
ATRIP-208ENST00000639561 SCN1AP35498 2009 aa14.6□□□□□ -0.07
ATRIP-208ENST00000639561 GPR32O75388 356 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 PAEPP09466 180 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 ATICP31939 592 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 KRT17Q04695 432 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 ADCY2Q08462 1091 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 KYAT1Q16773 422 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 UBAP2Q5T6F2 1119 aaKnown RBP14.59□□□□□ -0.07
ATRIP-208ENST00000639561 TXNRD3NBQ6F5E7 133 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 DCUN1D2Q6PH85 259 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 RUFY4Q6ZNE9 571 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 EXD1Q8NHP7 514 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 FAM118BQ9BPY3 351 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 OSBPL8Q9BZF1 889 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 PI4K2BG5E9Z4 385 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 GRM5P41594 1212 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 SMYD5Q6GMV2 418 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 RNF25Q96BH1 459 aaPredicted RBP14.59□□□□□ -0.07
ATRIP-208ENST00000639561 CPXM1Q96SM3 734 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 ADPGKQ9BRR6 497 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 TSPYL2Q9H2G4 693 aaPredicted RBP14.59□□□□□ -0.07
ATRIP-208ENST00000639561 DPP3Q9NY33 737 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 ITGA11Q9UKX5 1188 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 INSL6Q9Y581 213 aa14.59□□□□□ -0.07
ATRIP-208ENST00000639561 M0QZ92 97 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 NPTXRO95502 500 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 POU3F3P20264 500 aaPredicted RBP14.58□□□□□ -0.08
ATRIP-208ENST00000639561 MGAT3Q09327 533 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 PPP1R7Q15435 360 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 ZSCAN26Q16670 478 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 DNAJB3Q8WWF6 145 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 ARNTL2Q8WYA1 636 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 ART4Q93070 314 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 KIF12Q96FN5 646 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 TMEM176AQ96HP8 235 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 ZMAT2Q96NC0 199 aaKnown RBP14.58□□□□□ -0.08
ATRIP-208ENST00000639561 OSMRQ99650 979 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 EIF2AQ9BY44 585 aaKnown RBP14.58□□□□□ -0.08
ATRIP-208ENST00000639561 COL4A6Q14031 1691 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 GOLGA8SH3BPF8 625 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 MED7O43513 233 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 CHRNA1P02708 482 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 MYZAPP0CAP1 466 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 GBP1P32455 592 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 RFC1P35251 1148 aaPredicted RBP14.58□□□□□ -0.08
ATRIP-208ENST00000639561 MRPS6P82932 125 aaKnown RBP14.58□□□□□ -0.08
ATRIP-208ENST00000639561 NFX1Q12986 1120 aaKnown RBP14.58□□□□□ -0.08
ATRIP-208ENST00000639561 SPDYCQ5MJ68 293 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.58□□□□□ -0.08
ATRIP-208ENST00000639561 NIPA2Q8N8Q9 360 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 JOSD2Q8TAC2 188 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 MAIP1Q8WWC4 291 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 PPM1EQ8WY54 764 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 ACSF2Q96CM8 615 aaPredicted RBP14.58□□□□□ -0.08
ATRIP-208ENST00000639561 CYP3A43Q9HB55 503 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 HES2Q9Y543 173 aa14.58□□□□□ -0.08
ATRIP-208ENST00000639561 MICAL2O94851 1124 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 ERBB2P04626 1255 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 KRT10P13645 584 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 IVDP26440 423 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 ATP1A2P50993 1020 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 PMS2P54278 862 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 HNRNPH2P55795 449 aaKnown RBP14.57□□□□□ -0.08
ATRIP-208ENST00000639561 SKOR1P84550 965 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 INCA1Q0VD86 236 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 DCAF4L1Q3SXM0 396 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 TTC19Q6DKK2 380 aaPredicted RBP14.57□□□□□ -0.08
ATRIP-208ENST00000639561 LRRC31Q6UY01 552 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 TMCO2Q7Z6W1 182 aaPredicted RBP14.57□□□□□ -0.08
ATRIP-208ENST00000639561 SLITRK1Q96PX8 696 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 TGS1Q96RS0 853 aaKnown RBP14.57□□□□□ -0.08
ATRIP-208ENST00000639561 PABPC3Q9H361 631 aaKnown RBP14.57□□□□□ -0.08
ATRIP-208ENST00000639561 CENPHQ9H3R5 247 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 CERS4Q9HA82 394 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 SNTG2Q9NY99 539 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 PARP2Q9UGN5 583 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 STRIP2Q9ULQ0 834 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.57□□□□□ -0.08
ATRIP-208ENST00000639561 CDY2AQ9Y6F7 541 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 SQORQ9Y6N5 450 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 RALGAPA2Q2PPJ7 1873 aa14.57□□□□□ -0.08
ATRIP-208ENST00000639561 LCHNA4D1U4 455 aa14.56□□□□□ -0.08
ATRIP-208ENST00000639561 GOLGA6L10A6NI86 522 aa14.56□□□□□ -0.08
ATRIP-208ENST00000639561 HMGB1P1B2RPK0 211 aaPredicted RBP14.56□□□□□ -0.08
ATRIP-208ENST00000639561 PPEF2O14830 753 aa14.56□□□□□ -0.08
ATRIP-208ENST00000639561 RPS6KA5O75582 802 aa14.56□□□□□ -0.08
ATRIP-208ENST00000639561 SHBGP04278 402 aa14.56□□□□□ -0.08
ATRIP-208ENST00000639561 GHRP10912 638 aa14.56□□□□□ -0.08
ATRIP-208ENST00000639561 NDST1P52848 882 aa14.56□□□□□ -0.08
ATRIP-208ENST00000639561 RBP5P82980 135 aa14.56□□□□□ -0.08
ATRIP-208ENST00000639561 HTRA4P83105 476 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms