RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 NDUFB5O43674 189 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 TSPY3P0CV98 308 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 TSPY8P0CW00 308 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 CYP4A11Q02928 519 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 SLC15A2Q16348 729 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 CAVIN4Q5BKX8 364 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 RARS2Q5T160 578 aaKnown RBP12.52□□□□□ -0.4
CAPN3-221ENST00000638141 TPTE2Q6XPS3 522 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 PRPF39Q86UA1 669 aaKnown RBP12.52□□□□□ -0.4
CAPN3-221ENST00000638141 CCDC33Q8N5R6 958 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 ZNF384Q8TF68 577 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 PHF12Q96QT6 1004 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 OLFML3Q9NRN5 406 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.4
CAPN3-221ENST00000638141 TMOD2Q9NZR1 351 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 PPARGC1AQ9UBK2 798 aaKnown RBP12.52□□□□□ -0.4
CAPN3-221ENST00000638141 CNOT11Q9UKZ1 510 aaKnown RBP12.52□□□□□ -0.4
CAPN3-221ENST00000638141 MYO3BQ8WXR4 1341 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-221ENST00000638141 H0YJX3 145 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 DNALI1O14645 258 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-221ENST00000638141 FAM189A1O60320 539 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 CYP2D6P10635 497 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 ETNPPLQ8TBG4 499 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 RAB3IL1Q8TBN0 382 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 NSMCE3Q96MG7 304 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 MRPL46Q9H2W6 279 aaKnown RBP12.52□□□□□ -0.41
CAPN3-221ENST00000638141 TMEM260Q9NX78 707 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 ITGA11Q9UKX5 1188 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 DNM3Q9UQ16 869 aa12.52□□□□□ -0.41
CAPN3-221ENST00000638141 WDR91A4D1P6 747 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 INHBBP09529 407 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 TSHRP16473 764 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 MYL7Q01449 175 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 MECOMQ03112 1051 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 SLC18A2Q05940 514 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 KDSRQ06136 332 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 KLHL38Q2WGJ6 581 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 HSF5Q4G112 596 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 SMUG1Q53HV7 270 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 METTL21CQ5VZV1 264 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 PEX5LQ8IYB4 626 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 PLEKHA8Q96JA3 519 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 NUF2Q9BZD4 464 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 GLT8D2Q9H1C3 349 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 STN1Q9H668 368 aaKnown RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 RBBP6Q7Z6E9 1792 aaKnown RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 RGPD3A6NKT7 1758 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 RGPD4Q7Z3J3 1758 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 FAM237BA0A1B0GVD1 139 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 CYP26A1O43174 497 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 MARCH6O60337 910 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 MGEA5O60502 916 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 SULT1C4O75897 302 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 POLR2EP19388 210 aaKnown RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 EIF2B2P49770 351 aaKnown RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 CASP5P51878 434 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 MORF4L2Q15014 288 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 TRIP13Q15645 432 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 ARL13BQ3SXY8 428 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 RABGAP1LQ5R372 815 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 SPOPLQ6IQ16 392 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 MOXD1Q6UVY6 613 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 SLFN12Q8IYM2 578 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 LINC00116Q8NCU8 138 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 APOPT1Q96IL0 206 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 TDRD1Q9BXT4 1180 aaKnown RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 ATAD3AQ9NVI7 634 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 SLC17A7Q9P2U7 560 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 POMPQ9Y244 141 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 RABGAP1Q9Y3P9 1069 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-221ENST00000638141 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 NAV1Q8NEY1 1877 aa12.51□□□□□ -0.41
CAPN3-221ENST00000638141 TAF1LQ8IZX4 1826 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ARHGAP42A6NI28 874 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ATP2A1O14983 1001 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 NOVP48745 357 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 CASP4P49662 377 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
CAPN3-221ENST00000638141 SLC27A3Q5K4L6 730 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ZNF804AQ7Z570 1209 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 TSPAN14Q8NG11 270 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ATG4AQ8WYN0 398 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 CTRCQ99895 268 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 NUP85Q9BW27 656 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 CDH22Q9UJ99 828 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 DOLKQ9UPQ8 538 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 COL24A1Q17RW2 1714 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ZNFX1Q9P2E3 1918 aaKnown RBP12.5□□□□□ -0.41
CAPN3-221ENST00000638141 TRIM64CA6NLI5 447 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 TMEM114B3SHH9 223 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms