RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 MYL7Q01449 175 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 TSPY1Q01534 308 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 PPP3CAQ08209 521 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 USP4Q13107 963 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 SRSF5Q13243 272 aaKnown RBP8.37□□□□□ -1.07
PNKP-229ENST00000637897 PON2Q15165 354 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 SURF1Q15526 300 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 STX1AQ16623 288 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 WDR72Q3MJ13 1102 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 HS1BP3Q53T59 392 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 MDH1BQ5I0G3 518 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 SPOPLQ6IQ16 392 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 SFTPA1Q8IWL2 248 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 CELF5Q8N6W0 485 aaKnown RBP8.37□□□□□ -1.07
PNKP-229ENST00000637897 ARL14EPQ8N8R7 260 aaPredicted RBP8.37□□□□□ -1.07
PNKP-229ENST00000637897 MYCBPAPQ8TBZ2 947 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 WHAMMQ8TF30 809 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 E2F7Q96AV8 911 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 FUBP3Q96I24 572 aaKnown RBP eCLIP8.37□□□□□ -1.07
PNKP-229ENST00000637897 ZFRQ96KR1 1074 aaKnown RBP8.37□□□□□ -1.07
PNKP-229ENST00000637897 SPATA17Q96L03 361 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 TWNKQ96RR1 684 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 NELL2Q99435 816 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 LRRC27Q9C0I9 530 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 KIAA1586Q9HCI6 787 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 PARD6AQ9NPB6 346 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 FAM13BQ9NYF5 915 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 IL37Q9NZH6 218 aa8.37□□□□□ -1.07
PNKP-229ENST00000637897 HELZP42694 1942 aaKnown RBP8.37□□□□□ -1.07
PNKP-229ENST00000637897 KIAA1549LQ6ZVL6 1849 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ZNF840PA6NDX5 716 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 LAMTOR5O43504 91 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 EXOC3O60645 756 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 EGFP01133 1207 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 TNNC2P02585 160 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 NR3C1P04150 777 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 PTPN1P18031 435 aaKnown RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 TNNI1P19237 187 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 RFX1P22670 979 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 PCSK1P29120 753 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 GNL1P36915 607 aaPredicted RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 MAGEA9P43362 315 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 SYKP43405 635 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ASPAP45381 313 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 PMS1P54277 932 aaKnown RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 FOXK2Q01167 660 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ORC1Q13415 861 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 RUNX3Q13761 415 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ZNF268Q14587 947 aaPredicted RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 VEPH1Q14D04 833 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 EML3Q32P44 896 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ZACNQ401N2 412 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ARHGAP29Q52LW3 1261 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 TMEM196Q5HYL7 178 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 KRBA2Q6ZNG9 492 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 SV2AQ7L0J3 742 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 RALGPS2Q86X27 583 aaPredicted RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 SPATA2LQ8IUW3 424 aaPredicted RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 SCN4BQ8IWT1 228 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ELOA2Q8IYF1 753 aaPredicted RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 SMYD4Q8IYR2 804 aaPredicted RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 FUKQ8N0W3 1084 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 SCAMP5Q8TAC9 235 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ERCC4Q92889 916 aaPredicted RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 RMDN1Q96DB5 314 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 EEF2KMTQ96G04 330 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 C8orf48Q96LL4 319 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 KCNK16Q96T55 309 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 NAT10Q9H0A0 1025 aaKnown RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 EPC1Q9H2F5 836 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 C8orf33Q9H7E9 229 aaPredicted RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
PNKP-229ENST00000637897 TDP1Q9NUW8 608 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ANO10Q9NW15 660 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 ZSCAN32Q9NX65 697 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 HOOK1Q9UJC3 728 aaKnown RBP8.36□□□□□ -1.07
PNKP-229ENST00000637897 MAPK8IP1Q9UQF2 711 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 TRAF3IP3Q9Y228 551 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 WNT6Q9Y6F9 365 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 NCOR2Q9Y618 2525 aa8.36□□□□□ -1.07
PNKP-229ENST00000637897 FAM92AA1XBS5 289 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 CHURC1-FNTBB4DL54 471 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 HHLA1C9JL84 531 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 PDXKO00764 312 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 TRDMT1O14717 391 aaKnown RBP8.35□□□□□ -1.07
PNKP-229ENST00000637897 SCAMP3O14828 347 aaKnown RBP8.35□□□□□ -1.07
PNKP-229ENST00000637897 GREM1O60565 184 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 PAPSS2O95340 614 aaPredicted RBP8.35□□□□□ -1.07
PNKP-229ENST00000637897 FGF19O95750 216 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 ASS1P00966 412 aaKnown RBP8.35□□□□□ -1.07
PNKP-229ENST00000637897 OAS1P00973 400 aaKnown RBP8.35□□□□□ -1.07
PNKP-229ENST00000637897 FAM163BP0C2L3 166 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 TRIM49P0CI25 452 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 TRIM49CP0CI26 452 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 HNRNPLP14866 589 aaKnown RBP eCLIP8.35□□□□□ -1.07
PNKP-229ENST00000637897 TCF3P15923 654 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 GJA4P35212 333 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 FNTBP49356 437 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 ZNF165P49910 485 aa8.35□□□□□ -1.07
PNKP-229ENST00000637897 GALK1P51570 392 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms