RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 KLHL38Q2WGJ6 581 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SEZ6Q53EL9 994 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 NOMO2Q5JPE7 1267 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 C6orf118Q5T5N4 469 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CCDC137Q6PK04 289 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 SLC24A5Q71RS6 500 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 EPM2AIP1Q7L775 607 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 ACOT1Q86TX2 421 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 KIAA0319LQ8IZA0 1049 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SPATA4Q8NEY3 305 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CCDC110Q8TBZ0 833 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SNF8Q96H20 258 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 VPS39Q96JC1 886 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SMC6Q96SB8 1091 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 AP1M1Q9BXS5 423 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CNOT10Q9H9A5 744 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 KIF9Q9HAQ2 790 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 FAM105AQ9NUU6 356 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.78□□□□□ -1.48
CHD2-227ENST00000637572 CDH9Q9ULB4 789 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 PTCH2Q9Y6C5 1203 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 IQANK1A0A1B0GTG1 560 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 NDUFB5O43674 189 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ZNF862O60290 1169 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ARF4P18085 180 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 KLK7P49862 253 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 OXCT1P55809 520 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 DHX9Q08211 1270 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 ILF2Q12905 390 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 FAM187BQ17R55 369 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 SLC35G1Q2M3R5 365 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CCDC13Q8IYE1 715 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 RYBPQ8N488 228 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 ZNF558Q96NG5 402 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 POP1Q99575 1024 aaKnown RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 OSBPL8Q9BZF1 889 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 ABI2Q9NYB9 513 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 MAGED2Q9UNF1 606 aaPredicted RBP5.78□□□□□ -1.48
CHD2-227ENST00000637572 SH3BP1Q9Y3L3 701 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 RWDD3Q9Y3V2 267 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 HEY1Q9Y5J3 304 aa5.78□□□□□ -1.48
CHD2-227ENST00000637572 CHD4Q14839 1912 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 RIF1Q5UIP0 2472 aaKnown RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 NCAM2O15394 837 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 PJA2O43164 708 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 SPAG6O75602 509 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 KRT37O76014 449 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 PROSCO94903 275 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 C22orf31O95567 290 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 EOMESO95936 686 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 NCAM1P13591 858 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 ITIH2P19823 946 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 COMTP21964 271 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 BMP6P22004 513 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 CYP2C18P33260 490 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 NDST1P52848 882 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 PDE1BQ01064 536 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 CCDC15Q0P6D6 951 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 TUSC3Q13454 348 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 DCAF6Q58WW2 860 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 ANKS3Q6ZW76 656 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 SHC3Q92529 594 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 USP13Q92995 863 aaPredicted RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 ZBTB45Q96K62 511 aaPredicted RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 FSD1LQ9BXM9 530 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 BRD8Q9H0E9 1235 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 KCNF1Q9H3M0 494 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 FZD8Q9H461 694 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 TXNRD2Q9NNW7 524 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 KCND1Q9NSA2 647 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 PAK5Q9P286 719 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 NAV1Q8NEY1 1877 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 WNK3Q9BYP7 1800 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 OR6C75A6NL08 312 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 BTNL10A8MVZ5 291 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 EEF2KO00418 725 aaKnown RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 ASS1P00966 412 aaKnown RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 MMEP08473 750 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 HPDP32754 393 aaPredicted RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 STX2P32856 288 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 GJA9P57773 515 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 EIF3EP60228 445 aaKnown RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 ZNF235Q14590 738 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 PPP2R5DQ14738 602 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 CCDC85BQ15834 202 aaPredicted RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 RNF187Q5TA31 235 aaPredicted RBP5.77□□□□□ -1.49
CHD2-227ENST00000637572 GJB7Q6PEY0 223 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 UNC45BQ8IWX7 931 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 FAM71AQ8IYT1 594 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 LRRC43Q8N309 656 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 PDZD8Q8NEN9 1154 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 SPATA18Q8TC71 538 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 PPP4R1Q8TF05 950 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 ARHGEF26Q96DR7 871 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 IFT43Q96FT9 208 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 SENP8Q96LD8 212 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 GAD1Q99259 594 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 ZSWIM1Q9BR11 485 aa5.77□□□□□ -1.49
CHD2-227ENST00000637572 PARD6BQ9BYG5 372 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms