RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 ZNF560Q96MR9 790 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 KIAA1683Q9H0B3 1180 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 CAAP1Q9H8G2 361 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 EML4Q9HC35 981 aaKnown RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 SLCO1B3Q9NPD5 702 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 AVENQ9NQS1 362 aaPredicted RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 ZNRF3Q9ULT6 936 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 MAPTP10636 758 aaKnown RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 HSD17B4P51659 736 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 ART4Q93070 314 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 MST1RQ04912 1400 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 ANKRD63C9JTQ0 380 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 EEF2KO00418 725 aaKnown RBP16.48■□□□□ 0.23
CLN5-218ENST00000637397 PTGER2P43116 358 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 NPY5RQ15761 445 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 VPS72Q15906 364 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 NUP93Q8N1F7 819 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 KAT2BQ92831 832 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 TBC1D10AQ9BXI6 508 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 ILKAPQ9H0C8 392 aaPredicted RBP16.48■□□□□ 0.23
CLN5-218ENST00000637397 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
CLN5-218ENST00000637397 PIAS1O75925 651 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 GFAPP14136 432 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 ETS1P14921 441 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 CYLC2Q14093 348 aaPredicted RBP16.48■□□□□ 0.23
CLN5-218ENST00000637397 ABI1Q8IZP0 508 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 SYTL5Q8TDW5 730 aaPredicted RBP16.48■□□□□ 0.23
CLN5-218ENST00000637397 KBTBD13C9JR72 458 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 TGFB1I1O43294 461 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 NAMPTP43490 491 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 DDR1Q08345 913 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 EFCAB12Q6NXP0 572 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 PDCD2LQ9BRP1 358 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 F8VP50 259 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 RAP1GAPP47736 663 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 EFHC1Q5JVL4 640 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 C4orf22Q6V702 233 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 LRRC74BQ6ZQY2 392 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 TFB1MQ8WVM0 346 aaKnown RBP16.48■□□□□ 0.23
CLN5-218ENST00000637397 OXNAD1Q96HP4 312 aaPredicted RBP16.48■□□□□ 0.23
CLN5-218ENST00000637397 ELMO2Q96JJ3 720 aa16.48■□□□□ 0.23
CLN5-218ENST00000637397 SAE1Q9UBE0 346 aaPredicted RBP16.48■□□□□ 0.23
CLN5-218ENST00000637397 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 E9PBE3 544 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 KLHL41O60662 606 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 ENTPD5O75356 428 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 KYAT1Q16773 422 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 FRA10AC1Q70Z53 315 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 MMP19Q99542 508 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 LRRC19Q9H756 370 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 CYP39A1Q9NYL5 469 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 IFT172Q9UG01 1749 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 VIL1P09327 827 aaKnown RBP16.47■□□□□ 0.23
CLN5-218ENST00000637397 SPATA31C1P0DKV0 1188 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 INPP5AQ14642 412 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 SRPK1Q96SB4 655 aaKnown RBP16.47■□□□□ 0.23
CLN5-218ENST00000637397 SMARCAD1Q9H4L7 1026 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 LSM8O95777 96 aaKnown RBP16.47■□□□□ 0.23
CLN5-218ENST00000637397 MARSP56192 900 aaKnown RBP16.47■□□□□ 0.23
CLN5-218ENST00000637397 FAAP100Q0VG06 881 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 ATP13A4Q4VNC1 1196 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 SETD3Q86TU7 594 aaPredicted RBP16.47■□□□□ 0.23
CLN5-218ENST00000637397 POU5F2Q8N7G0 328 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 TSR3Q9UJK0 312 aaKnown RBP16.47■□□□□ 0.23
CLN5-218ENST00000637397 STARD13Q9Y3M8 1113 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 IYDQ6PHW0 289 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 FOXR2Q6PJQ5 311 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 PPHLN1Q8NEY8 458 aaKnown RBP16.47■□□□□ 0.23
CLN5-218ENST00000637397 INPP5DQ92835 1189 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 NMD3Q96D46 503 aaKnown RBP16.47■□□□□ 0.23
CLN5-218ENST00000637397 VCPIP1Q96JH7 1222 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 IL1RL2Q9HB29 575 aa16.47■□□□□ 0.23
CLN5-218ENST00000637397 TPST1O60507 370 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
CLN5-218ENST00000637397 FAM172AQ8WUF8 416 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 RXFP2Q8WXD0 754 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 OSBPL7Q9BZF2 842 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 DNM1LO00429 736 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 FKBP6O75344 327 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 RALBP11234 206 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 FAM71AQ8IYT1 594 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 APPL2Q8NEU8 664 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 ADNPQ9H2P0 1102 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 PRMT7Q9NVM4 692 aaPredicted RBP16.46■□□□□ 0.23
CLN5-218ENST00000637397 FAM53CQ9NYF3 392 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 DCDC2Q9UHG0 476 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 CACNA1FO60840 1977 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 SDR42E2A6NKP2 422 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 TGM2P21980 687 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 DEFB107AQ8IZN7 70 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 RASGEF1CQ8N431 466 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 CYGBQ8WWM9 190 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 CNPY3Q9BT09 278 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 SAR1AQ9NR31 198 aa16.46■□□□□ 0.23
CLN5-218ENST00000637397 ARHGEF37A1IGU5 675 aa16.46■□□□□ 0.22
CLN5-218ENST00000637397 NCALDP61601 193 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms