RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ACSF2Q96CM8 615 aaPredicted RBP12.71□□□□□ -0.38
CLN8-212ENST00000637083 GRAMD1AQ96CP6 724 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 PWWP2AQ96N64 755 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 TSPAN18Q96SJ8 248 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 VPS37BQ9H9H4 285 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 HESX1Q9UBX0 185 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 SMG5Q9UPR3 1016 aaKnown RBP12.71□□□□□ -0.38
CLN8-212ENST00000637083 BTBD19C9JJ37 291 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 CSDE1O75534 798 aaKnown RBP12.7□□□□□ -0.38
CLN8-212ENST00000637083 SNAI1O95863 264 aaPredicted RBP12.7□□□□□ -0.38
CLN8-212ENST00000637083 PDGFRAP16234 1089 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
CLN8-212ENST00000637083 EIF3EP60228 445 aaKnown RBP12.7□□□□□ -0.38
CLN8-212ENST00000637083 FKBP1BP68106 108 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 IL9RQ01113 521 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 PDIA2Q13087 525 aaKnown RBP12.7□□□□□ -0.38
CLN8-212ENST00000637083 IRF5Q13568 498 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 CCDC142Q17RM4 750 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 DPH6Q7L8W6 267 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 VSIG1Q86XK7 387 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 ZBED8Q8IZ13 594 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 KIAA0319LQ8IZA0 1049 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 CNPY4Q8N129 248 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 LRRC52Q8N7C0 313 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.7□□□□□ -0.38
CLN8-212ENST00000637083 HSPH1Q92598 858 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 MAGEB18Q96M61 343 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 TBCBQ99426 244 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 CALN1Q9BXU9 219 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 EURLQ9NYK6 297 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 HMGXB4Q9UGU5 601 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 TBK1Q9UHD2 729 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 PCSK1NQ9UHG2 260 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
CLN8-212ENST00000637083 MCM3APO60318 1980 aa12.7□□□□□ -0.38
CLN8-212ENST00000637083 PLXNB2O15031 1838 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 PLXNA1Q9UIW2 1896 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 FAM47DPA6NHR8 397 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 C2CD4BA6NLJ0 364 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 CCT8L1PA6NM43 557 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 DPYSL4O14531 572 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 XPOTO43592 962 aaKnown RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 GSTA1P08263 222 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 ETS1P14921 441 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 AXLP30530 894 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 ORC1Q13415 861 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 ACVR2BQ13705 512 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 GRB14Q14449 540 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 TMED2Q15363 201 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 KLHL38Q2WGJ6 581 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 ANKRD20A8PQ5CZ79 823 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 NOTUMQ6P988 496 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 CATSPER4Q7RTX7 472 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 GPR142Q7Z601 462 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 PLEKHH3Q7Z736 793 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 PRUNE1Q86TP1 453 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 PDIK1LQ8N165 341 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 ANKRD42Q8N9B4 389 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 GLIS1Q8NBF1 620 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 UBA3Q8TBC4 463 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 STK32AQ8WU08 396 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 PYROXD1Q8WU10 500 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 TEKT4Q8WW24 435 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 USP6NLQ92738 828 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 MAML3Q96JK9 1138 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 ELAC2Q9BQ52 826 aaKnown RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 TINF2Q9BSI4 451 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 FRMD8Q9BZ67 464 aaPredicted RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 TJP2Q9UDY2 1190 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 EVPLQ92817 2033 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 CFAP69A5D8W1 941 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 SUN1O94901 812 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 ENDOD1O94919 500 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 NPTXRO95502 500 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 RBP3P10745 1247 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 SMPD1P17405 629 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 GBP2P32456 591 aaPredicted RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 CDH6P55285 790 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 ROR1Q01973 937 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 KRT81Q14533 505 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 MARCH8Q5T0T0 291 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 MAP1SQ66K74 1059 aaPredicted RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 SESTD1Q86VW0 696 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 GBP7Q8N8V2 638 aaPredicted RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 RXFP2Q8WXD0 754 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 BRI3BPQ8WY22 251 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 CCT6BQ92526 530 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 MAML1Q92585 1016 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 SMC6Q96SB8 1091 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 GBA2Q9HCG7 927 aaPredicted RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms