RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 CPT1BQ92523 772 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 ROPN1BQ9BZX4 212 aaPredicted RBP19.8■□□□□ 0.76
CLN5-216ENST00000636780 NXF3Q9H4D5 531 aaKnown RBP19.8■□□□□ 0.76
CLN5-216ENST00000636780 ROPN1Q9HAT0 212 aaPredicted RBP19.8■□□□□ 0.76
CLN5-216ENST00000636780 ALG13Q9NP73 1137 aaKnown RBP19.8■□□□□ 0.76
CLN5-216ENST00000636780 GRID1Q9ULK0 1009 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 SCN1AP35498 2009 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 ANK1P16157 1881 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 WDR91A4D1P6 747 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 ASB14A6NK59 587 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 GAS2O43903 313 aaKnown RBP19.8■□□□□ 0.76
CLN5-216ENST00000636780 LAMC2Q13753 1193 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 BBS9Q3SYG4 887 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 ARMC9Q7Z3E5 817 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 NPLOC4Q8TAT6 608 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 CCT6BQ92526 530 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 ZNF518BQ9C0D4 1074 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 RNF39Q9H2S5 420 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 SLCO1B3Q9NPD5 702 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 HOMER3Q9NSC5 361 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 WDR4P57081 412 aaKnown RBP19.79■□□□□ 0.76
CLN5-216ENST00000636780 ACTN3Q08043 901 aaPredicted RBP19.79■□□□□ 0.76
CLN5-216ENST00000636780 GOLGA7BQ2TAP0 167 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 DPY19L2Q6NUT2 758 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 TTC30AQ86WT1 665 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 SPATA18Q8TC71 538 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 PRCCQ92733 491 aaPredicted RBP19.79■□□□□ 0.76
CLN5-216ENST00000636780 SPON1Q9HCB6 807 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 KAT6AQ92794 2004 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 KRT15P19012 456 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 LMO2P25791 158 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 HOXA11P31270 313 aaPredicted RBP19.79■□□□□ 0.76
CLN5-216ENST00000636780 SCTRP47872 440 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 EIF3EP60228 445 aaKnown RBP19.79■□□□□ 0.76
CLN5-216ENST00000636780 CYP4V2Q6ZWL3 525 aaPredicted RBP19.79■□□□□ 0.76
CLN5-216ENST00000636780 RSAD2Q8WXG1 361 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 CENPTQ96BT3 561 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 KATNBL1Q9H079 304 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 CLUHO75153 1309 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 TRUB2O95900 331 aaKnown RBP19.79■□□□□ 0.76
CLN5-216ENST00000636780 RBP3P10745 1247 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 PPP6R3Q5H9R7 873 aaPredicted RBP19.79■□□□□ 0.76
CLN5-216ENST00000636780 PIGWQ7Z7B1 504 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 LINC01465Q8N7H1 131 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 TMEM40Q8WWA1 233 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 MAML1Q92585 1016 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 MS4A4AQ96JQ5 239 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 LHX5Q9H2C1 402 aa19.79■□□□□ 0.76
CLN5-216ENST00000636780 MED7O43513 233 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 IL18RAPO95256 599 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 CCDC130P13994 396 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 STX2P32856 288 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 ZNF484Q5JVG2 852 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 CGB2Q6NT52 195 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 CCDC125Q86Z20 511 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 TGS1Q96RS0 853 aaKnown RBP19.78■□□□□ 0.76
CLN5-216ENST00000636780 PTPN18Q99952 460 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 TMPRSS4Q9NRS4 437 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 PNMA3Q9UL41 463 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 MCF2P10911 925 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 ADORA2BP29275 332 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 RPA3P35244 121 aaPredicted RBP19.78■□□□□ 0.76
CLN5-216ENST00000636780 SLC26A2P50443 739 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 OR6J1Q8NGC5 347 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 PPTC7Q8NI37 304 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 STRIP2Q9ULQ0 834 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 TRIM33Q9UPN9 1127 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 CHMP2BQ9UQN3 213 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 MFHAS1Q9Y4C4 1052 aa19.78■□□□□ 0.76
CLN5-216ENST00000636780 MKI67P46013 3256 aaKnown RBP19.77■□□□□ 0.76
CLN5-216ENST00000636780 RNF8O76064 485 aa19.77■□□□□ 0.76
CLN5-216ENST00000636780 DNAJC3Q13217 504 aa19.77■□□□□ 0.76
CLN5-216ENST00000636780 LRRC38Q5VT99 294 aa19.77■□□□□ 0.76
CLN5-216ENST00000636780 GPR142Q7Z601 462 aa19.77■□□□□ 0.76
CLN5-216ENST00000636780 NIPA2Q8N8Q9 360 aa19.77■□□□□ 0.76
CLN5-216ENST00000636780 OR6B3Q8NGW1 331 aa19.77■□□□□ 0.76
CLN5-216ENST00000636780 MAK16Q9BXY0 300 aaKnown RBP19.77■□□□□ 0.76
CLN5-216ENST00000636780 SAMD15Q9P1V8 674 aa19.77■□□□□ 0.76
CLN5-216ENST00000636780 A0A1B0GUA9 196 aa19.77■□□□□ 0.75
CLN5-216ENST00000636780 CCT8L1PA6NM43 557 aa19.77■□□□□ 0.75
CLN5-216ENST00000636780 CDH16O75309 829 aa19.77■□□□□ 0.75
CLN5-216ENST00000636780 FGFR1P11362 822 aa19.77■□□□□ 0.75
CLN5-216ENST00000636780 CAV1Q03135 178 aa19.77■□□□□ 0.75
CLN5-216ENST00000636780 HADHQ16836 314 aaKnown RBP19.77■□□□□ 0.75
CLN5-216ENST00000636780 LDLRAD1Q5T700 205 aa19.77■□□□□ 0.75
CLN5-216ENST00000636780 C3orf62Q6ZUJ4 267 aa19.77■□□□□ 0.75
CLN5-216ENST00000636780 FBXO36Q8NEA4 188 aa19.77■□□□□ 0.75
CLN5-216ENST00000636780 BARX2Q9UMQ3 279 aaPredicted RBP19.77■□□□□ 0.75
CLN5-216ENST00000636780 SYNJ2BP-COX16A0A087WUM0 186 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 ITGAVP06756 1048 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 BEX3Q00994 111 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 HIF1AQ16665 826 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 CCDC14Q49A88 953 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 DARS2Q6PI48 645 aaKnown RBP19.76■□□□□ 0.75
CLN5-216ENST00000636780 CATSPER4Q7RTX7 472 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 UPF1Q92900 1129 aaKnown RBP eCLIP19.76■□□□□ 0.75
CLN5-216ENST00000636780 NKD2Q969F2 451 aaPredicted RBP19.76■□□□□ 0.75
CLN5-216ENST00000636780 MCRS1Q96EZ8 462 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 RMDN2Q96LZ7 410 aa19.76■□□□□ 0.75
CLN5-216ENST00000636780 CD248Q9HCU0 757 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms