RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 IFRD2Q12894 506 aaPredicted RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 PDCLQ13371 301 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 ACAD10Q6JQN1 1059 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 PIGZQ86VD9 579 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 CPNE8Q86YQ8 564 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 REXO1L1PQ8IX06 675 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 CCDC170Q8IYT3 715 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 SCAMP5Q8TAC9 235 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 LRCH3Q96II8 777 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 FAM161BQ96MY7 647 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 KLHL5Q96PQ7 755 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 C11orf84Q9BUA3 381 aaPredicted RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 TRIM7Q9C029 511 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 TTYH1Q9H313 450 aaPredicted RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 FAM124BQ9H5Z6 455 aaPredicted RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 MYO1AQ9UBC5 1043 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 PPP2R2CQ9Y2T4 447 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 DENND4CQ5VZ89 1909 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 TGM5O43548 720 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 RTN2O75298 545 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 ABLIM3O94929 683 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 RB1P06400 928 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 FAM200BP0CF97 657 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 NPR3P17342 541 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 ATF6P18850 670 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 RRM1P23921 792 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 ARHGAP25P42331 645 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 USP46P62068 366 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 BST2Q10589 180 aaKnown RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 TAF5Q15542 800 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 MON1BQ7L1V2 547 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 SCUBE3Q8IX30 993 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 DCP1BQ8IZD4 617 aaKnown RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 MCOLN2Q8IZK6 566 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 MRPL43Q8N983 215 aaKnown RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 TMEM35BQ8NCS4 154 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 GIPC2Q8TF65 315 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 TRIM44Q96DX7 344 aaPredicted RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 SEPT5Q99719 369 aaPredicted RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 IRX2Q9BZI1 471 aaPredicted RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 MIS12Q9H081 205 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 LHX5Q9H2C1 402 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 RXFP1Q9HBX9 757 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 LZTS1Q9Y250 596 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 PCDHB5Q9Y5E4 795 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 GOLGA8SH3BPF8 625 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 GRAP2O75791 330 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 EPCAMP16422 314 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 MMP8P22894 467 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 GRIK1P39086 918 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 NSFP46459 744 aaKnown RBP11.25□□□□□ -0.61
CLN5-213ENST00000636681 BCAT1P54687 386 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 SMAD3P84022 425 aaKnown RBP11.25□□□□□ -0.61
CLN5-213ENST00000636681 ADIGQ0VDE8 80 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 RAB33AQ14088 237 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 PTPROQ16827 1216 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 MGAT5BQ3V5L5 792 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 FAM183BPQ6ZVS7 135 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 VPS36Q86VN1 386 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 ZNF461Q8TAF7 563 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 KIAA1524Q8TCG1 905 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 SMARCD1Q96GM5 515 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 BTBD6Q96KE9 485 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 PPP1R13BQ96KQ4 1090 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 GOLPH3Q9H4A6 298 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 PRDM12Q9H4Q4 367 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 OSGEPQ9NPF4 335 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 LZTFL1Q9NQ48 299 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 ADAM22Q9P0K1 906 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 COG5Q9UP83 839 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 ZKSCAN5Q9Y2L8 839 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 RWDD3Q9Y3V2 267 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 PAXBP1Q9Y5B6 917 aa11.25□□□□□ -0.61
CLN5-213ENST00000636681 NRG2O14511 850 aaPredicted RBP11.24□□□□□ -0.61
CLN5-213ENST00000636681 XPO1O14980 1071 aaKnown RBP11.24□□□□□ -0.61
CLN5-213ENST00000636681 PAPSS1O43252 624 aaPredicted RBP11.24□□□□□ -0.61
CLN5-213ENST00000636681 GZMAP12544 262 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 KLRC2P26717 231 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 SMC1AQ14683 1233 aaKnown RBP11.24□□□□□ -0.61
CLN5-213ENST00000636681 SPA17Q15506 151 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 CFAP221Q4G0U5 840 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 RAB6CQ53S08 254 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 HFE2Q6ZVN8 426 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 ERICH1Q86X53 443 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 XYLT1Q86Y38 959 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 PHF13Q86YI8 300 aaPredicted RBP11.24□□□□□ -0.61
CLN5-213ENST00000636681 FMNL3Q8IVF7 1028 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 ZNF653Q96CK0 615 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 SLC4A5Q9BY07 1137 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 RAB6CQ9H0N0 254 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 ZNF576Q9H609 170 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 CYP4F11Q9HBI6 524 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 CSNK1G1Q9HCP0 422 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 FNIP2Q9P278 1114 aa11.24□□□□□ -0.61
CLN5-213ENST00000636681 TNFRSF10BO14763 440 aa11.23□□□□□ -0.61
CLN5-213ENST00000636681 BUB1O43683 1085 aa11.23□□□□□ -0.61
CLN5-213ENST00000636681 CLASP2O75122 1294 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms