RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 NAPEPLDQ6IQ20 393 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 DENND5BQ6ZUT9 1274 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 GUF1Q8N442 669 aaKnown RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 PPP1R13LQ8WUF5 828 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 IPCEF1Q8WWN9 437 aaPredicted RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 MRPL1Q9BYD6 325 aaKnown RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 RIC8BQ9NVN3 520 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 FKTNO75072 461 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 ICAM1P05362 532 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 ATL2Q8NHH9 583 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 OSBPL9Q96SU4 736 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 KRT84Q9NSB2 600 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 SNTG2Q9NY99 539 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 SCAMP3O14828 347 aaKnown RBP16.68■□□□□ 0.26
CLN5-208ENST00000636183 HALP42357 657 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 XRCC4Q13426 336 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 MARK2Q7KZI7 788 aaKnown RBP16.68■□□□□ 0.26
CLN5-208ENST00000636183 GID8Q9NWU2 228 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 RUVBL2Q9Y230 463 aaKnown RBP16.68■□□□□ 0.26
CLN5-208ENST00000636183 ANXA9O76027 345 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 CSF1RP07333 972 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 BEX3Q00994 111 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 TLK2Q86UE8 772 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 GOLPH3LQ9H4A5 285 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 SYBUQ9NX95 663 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 EIF2S1P05198 315 aaKnown RBP16.68■□□□□ 0.26
CLN5-208ENST00000636183 AKR1A1P14550 325 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 CDH2P19022 906 aaPredicted RBP16.68■□□□□ 0.26
CLN5-208ENST00000636183 MFSD10Q14728 455 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 PRMT3O60678 531 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 MTA2O94776 668 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 ITGALP20701 1170 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 SOCS4Q8WXH5 440 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 FHDC1Q9C0D6 1143 aaPredicted RBP16.68■□□□□ 0.26
CLN5-208ENST00000636183 NT5MQ9NPB1 228 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 SLC16A3O15427 465 aaKnown RBP16.68■□□□□ 0.26
CLN5-208ENST00000636183 SLC28A3Q9HAS3 691 aa16.68■□□□□ 0.26
CLN5-208ENST00000636183 STRNO43815 780 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 ACSL4O60488 711 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 SPRP35270 261 aaPredicted RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 ACTN3Q08043 901 aaPredicted RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 CYTH1Q15438 398 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 SYTL5Q8TDW5 730 aaPredicted RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 GPRASP2Q96D09 838 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 NSMCE4AQ9NXX6 385 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 SMARCAL1Q9NZC9 954 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 A0A087WZ62 844 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 POLR2EP19388 210 aaKnown RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 ADORA2AP29274 412 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 GEMP55040 296 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 FAAH2Q6GMR7 532 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 FAM71DQ8N9W8 422 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 RNPC3Q96LT9 517 aaKnown RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 FDXACB1Q9BRP7 624 aaPredicted RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 CHORDC1Q9UHD1 332 aaPredicted RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 SPATA31A7Q8IWB4 1347 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 MGAT4DA6NG13 374 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 IFNA16P05015 189 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 FAXCQ5TGI0 409 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 BTN2A1Q7KYR7 527 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 EPN3Q9H201 632 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 DDX43Q9NXZ2 648 aaKnown RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 ACTR5Q9H9F9 607 aaPredicted RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 JMJD4Q9H9V9 463 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 SAE1Q9UBE0 346 aaPredicted RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 SNX6Q9UNH7 406 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 TAF13Q15543 124 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 TRIP4Q15650 581 aaPredicted RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 GRIK4Q16099 956 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 CDCA5Q96FF9 252 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 TMEM8AQ9HCN3 771 aa16.67■□□□□ 0.26
CLN5-208ENST00000636183 MRPL17Q9NRX2 175 aaKnown RBP16.67■□□□□ 0.26
CLN5-208ENST00000636183 TFAP2DQ7Z6R9 452 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 DSG4Q86SJ6 1040 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 PRRG4Q9BZD6 226 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 TMEM245Q9H330 911 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 GOLPH3Q9H4A6 298 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLN5-208ENST00000636183 MYO1CO00159 1063 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 CASP8Q14790 479 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 JAMLQ86YT9 394 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 C1QTNF7Q9BXJ2 289 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 ADGRE3Q9BY15 652 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 GPRC5CQ9NQ84 441 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 EIF3LQ9Y262 564 aaKnown RBP16.66■□□□□ 0.26
CLN5-208ENST00000636183 GPSM3Q9Y4H4 160 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 TEX28O15482 410 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 ZNF200P98182 395 aaPredicted RBP16.66■□□□□ 0.26
CLN5-208ENST00000636183 ELAVL2Q12926 359 aaKnown RBP16.66■□□□□ 0.26
CLN5-208ENST00000636183 PDIA5Q14554 519 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 C7orf61Q8IZ16 206 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 THUMPD3Q9BV44 507 aaKnown RBP16.66■□□□□ 0.26
CLN5-208ENST00000636183 USP18Q9UMW8 372 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 VPS9D1Q9Y2B5 631 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 CCDC22O60826 627 aa16.66■□□□□ 0.26
CLN5-208ENST00000636183 OVOS1Q6IE37 1185 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms